how many arrows do you see in the following shape?

86
How many arrows do you see in the following shape?

Upload: june-perkins

Post on 25-Dec-2015

226 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: How many arrows do you see in the following shape?

How many arrows do you see in the following shape?

Page 2: How many arrows do you see in the following shape?

Microbial GrowthMicrobial GrowthMicrobiology 2314

Page 3: How many arrows do you see in the following shape?

Bacterial GrowthBacterial Growth

• Bacterial Growth is Bacterial Reproduction

• The Numbers of Bacteria are Increasing

• We see:

1. Observable Increases in Colonies

Growing on Solid Media

2. Turbidity, Sediment, Scum or a

Change in Color in Broth Cultures

Page 4: How many arrows do you see in the following shape?
Page 5: How many arrows do you see in the following shape?

Turbidity indicates bacterial numbers are increasing.

Page 6: How many arrows do you see in the following shape?

Binary Fission

Page 7: How many arrows do you see in the following shape?
Page 8: How many arrows do you see in the following shape?

Generation Time

The Time Required for a Cell to Divide

Page 9: How many arrows do you see in the following shape?

Rapid Growth of Bacterial PopulationRapid Growth of Bacterial Population

Page 10: How many arrows do you see in the following shape?
Page 11: How many arrows do you see in the following shape?

Cockroaches Left Unchecked and Allowed to Multiply At Will

Page 12: How many arrows do you see in the following shape?

Generation TimeGeneration Time

N = (log10Nf – log10No ) / .301

N Number of generations

Nf Final Concentration of Cells

No Original concentration of cells

.301 Conversion Factor to Convert Log2 to Log10

Page 13: How many arrows do you see in the following shape?

What is a Logarithm?What is a Logarithm?

• Logarithm is a function that gives the exponent in the equation bn = x. It is usually written as logb x = n.

• For example:

34 = 81 Therefore log3 81 = 4

Page 14: How many arrows do you see in the following shape?

Example 1Example 1N = (log10Nf – log10No ) / .301

Measure Culture at 9:00 a.m. 10,000 cells / mlMeasure Culture at 3:00 p.m. 100,000 cells / mlCalculate N

N = (log10Nf – log10No ) / .301

N = (5-4)/0.301

N = 1/0.301

N = 3.33 Generations in 6 Hours

We Know: 6 Hours = 360 Minutes

Therefore: Generation Time = 360 Minutes / 3.33 Generations

N = 108 Minutes to Generate

Page 15: How many arrows do you see in the following shape?

Example 2Example 2N = (log10Nf – log10No ) / .301

Measure Culture at 9:00 a.m. 10,000 cells / ml

Measure Culture at Noon 1,000,000 cells / ml

Calculate N

Page 16: How many arrows do you see in the following shape?

Example 2Example 2N = (log10Nf – log10No ) / .301

Measure Culture at 9:00 a.m. 10,000 cells / mlMeasure Culture at Noon 1,000,000 cells / mlCalculate N

N = (log10Nf – log10No ) / .301

N = (6-4)/0.301

N = 2/0.301

N = 6.64 Generations in 3 Hours

We Know: 3 Hours = 180 Minutes

Therefore: Generation Time = 180 Minutes / 6.64 Generations

N = 27 Minutes to Generate

Page 17: How many arrows do you see in the following shape?

Example 3Example 3N = (log10Nf – log10No ) / .301

Measure Culture at 9:00 a.m. 2000 cells / ml

Measure Culture at 1:00 p.m. 18,000 cells / ml

Calculate N

Page 18: How many arrows do you see in the following shape?

Example 3Example 3N = (log10Nf – log10No ) / .301

Measure Culture at 9:00 a.m. 2000 cells / mlMeasure Culture at 1:00 p.m. 18,000 cells / mlCalculate N

N = (log10Nf – log10No ) / .301

N = (4.25-3.30)/0.301

N = .95/0.301

N = 3.16 Generations in 4 Hours

We Know: 4 Hours = 240 Minutes

Therefore: Generation Time = 240 Minutes / 3.16 Generations

N = 75.9 Minutes to GenerateN = 1.27 Hours to Generate

Page 19: How many arrows do you see in the following shape?

Bacterial Growth Can Be Bacterial Growth Can Be Modeled With Four Different Modeled With Four Different

PhasesPhases

Page 20: How many arrows do you see in the following shape?

Phases of Microbial Growth

Page 21: How many arrows do you see in the following shape?

Typical bacterial exponential Growth Curve. In a rich culture medium bacteria, grown under aerobic conditions, achieve a final concentration of 2-5 x 109 cells per ml in about 12-18 hours. Although plotted on a different time scale the human growth curve looks the same; the human population at similar points on the growth curve are shown in red.

Page 22: How many arrows do you see in the following shape?

Remember the Four Main StagesRemember the Four Main Stages• Lag Phase

Initial Phase / Metabolic Activities• Exponential Phase

2nd Phase / Optimum Growth / Doubling• Stationary Phase

3rd Phase / Exhaustion of Nutrients / Accumulation of Wastes

• Death PhaseFinal Phase / Continued Accumulation90% of Cells Die, then 90% of Remaining Cells Die, etc.

Page 23: How many arrows do you see in the following shape?

Quantification of BacteriaQuantification of Bacteria

• Cell Numbers

• Total Mass of the Population

• Population Per Mediacells / ml or cells / gram

• Direct County Methods and Indirect Counting Methods

Page 24: How many arrows do you see in the following shape?

Direct Counting MethodsDirect Counting Methods

• Normally Viable Counts• Remember that a Colony Starts Out as 1

Bacteria that Reproduces• Colonies May Not All Be The Same Size

Page 25: How many arrows do you see in the following shape?

Types of Direct MeasurementsTypes of Direct Measurements

1. Plate Count

a. Spread (Streak) Plate

b. Pour Plate

2. Direct Observation on Slides

a. Petroff-Hausser Chamber Slide

3. Filtration

4. Most Probable Number

Page 26: How many arrows do you see in the following shape?

Direct Count

Spread or Streak Plate

Page 27: How many arrows do you see in the following shape?
Page 28: How many arrows do you see in the following shape?
Page 30: How many arrows do you see in the following shape?
Page 31: How many arrows do you see in the following shape?

Advantages to a Streak Plate?Advantages to a Streak Plate?

Disadvantages?Disadvantages?

Page 32: How many arrows do you see in the following shape?

Direct Direct CountCount

Pour PlatePour Plate

Page 33: How many arrows do you see in the following shape?
Page 34: How many arrows do you see in the following shape?

Advantages to a Pour Plate?Advantages to a Pour Plate?

Disadvantages?Disadvantages?

Page 35: How many arrows do you see in the following shape?

Petroff-Hausser Chamber Slide

Page 36: How many arrows do you see in the following shape?

What are You Counting on a Petroff-Hausser Slide?

Page 37: How many arrows do you see in the following shape?

Direct Method Direct Method

FiltrationFiltration

Page 38: How many arrows do you see in the following shape?
Page 39: How many arrows do you see in the following shape?

Most Probable NumberMost Probable Number

• Statistical Procedure used to estimate the number of bacteria that will grow in liquid media.

• Gives a 95% probability that the bacterial numbers will fall within a certain range.

Page 40: How many arrows do you see in the following shape?

Indirect MeasurementsIndirect Measurements

Turbidity

a. No turbidity = < 107 cells/ml

b. Slight = 107 – 108 cells/ml

c. High = 108 – 109 cells/ml

d. Very High = > 109 cells/ml

Metabolic Activity

Dry Weight

Page 41: How many arrows do you see in the following shape?

There Are More Accurate Methods to There Are More Accurate Methods to Determine Turbidity LevelsDetermine Turbidity Levels

Page 42: How many arrows do you see in the following shape?

Chemical and Physical Chemical and Physical Requirements for Bacterial Requirements for Bacterial

GrowthGrowth

Page 43: How many arrows do you see in the following shape?

Physical Requirements

Page 44: How many arrows do you see in the following shape?
Page 45: How many arrows do you see in the following shape?
Page 46: How many arrows do you see in the following shape?

Why is Mexican Food Spicy?Why is Mexican Food Spicy?

Page 47: How many arrows do you see in the following shape?

Oklahoma is #1Oklahoma is #1

Page 48: How many arrows do you see in the following shape?

Cardinal TemperaturesCardinal Temperatures

• Minimum Temperature• Optimum Temperature• Maximum Temperature

Page 49: How many arrows do you see in the following shape?

Classification of Bacteria by Classification of Bacteria by Temperature RequirementsTemperature Requirements

Page 50: How many arrows do you see in the following shape?

Buffers Are Added to Media to Maintain Proper pH

1. Phosphates

2. Peptones

3. Amino Acids

Page 51: How many arrows do you see in the following shape?

Classification of Bacteria by pH Classification of Bacteria by pH RequirementsRequirements

• Acidophiles 1.0 to 5.5

• Neutrophiles 5.5 to 8

• Alkalophiles 8.5 to 11.5

• Extreme

Alkalophiles > = 10.0

Page 52: How many arrows do you see in the following shape?

Osmotic Pressure EffectsOsmotic Pressure Effects

Page 53: How many arrows do you see in the following shape?

Bacterial response to osmotic effects is the reason we dry food.

Page 54: How many arrows do you see in the following shape?

Hams can be sugar cured or salt cured to preserve them.

Are they cooked?

Page 55: How many arrows do you see in the following shape?

What About Jerky?What About Jerky?

Page 56: How many arrows do you see in the following shape?

Chemical RequirementsChemical Requirementsfor Bacteriafor Bacteria

• Water (80-90%)

• Carbon (Backbone of Hydrocarbons)

• Nitrogen (Amino Acids & Vitamins)

• Sulfur (Amino Acids &Vitamins)

• Phosphorus (Nucleic Acids, ATP)

• Minerals (Fe, Cu, Mg, etc. / as Cofactors)

• Oxygen (aerobes only)

Page 57: How many arrows do you see in the following shape?

What About What About Oxygen?Oxygen?

Page 58: How many arrows do you see in the following shape?
Page 59: How many arrows do you see in the following shape?
Page 60: How many arrows do you see in the following shape?

Special Special Culture Culture TechniquesTechniques

Gas Pack Gas Pack Jar Is Used Jar Is Used for for Anaerobic Anaerobic GrowthGrowth

Page 61: How many arrows do you see in the following shape?

Special Culture TechniquesSpecial Culture Techniques

Candle JarCandle Jar

Page 62: How many arrows do you see in the following shape?
Page 63: How many arrows do you see in the following shape?

Peritoneal Fluid Mixed Anaerobic Infection

Page 64: How many arrows do you see in the following shape?

Types of MediaTypes of Media

• Media can be classified on three primary levels

1. Physical State

2. Chemical Composition

3. Functional Type

Page 65: How many arrows do you see in the following shape?

Physical States of MediaPhysical States of Media

• Liquid Media

• Semisolid

• Solid (Can be converted into a liquid)

• Solid (Cannot be converted into a liquid)

Page 66: How many arrows do you see in the following shape?

Liquid MediaLiquid Media

• Water-based solutions• Do not solidify at

temperatures above freezing / tend to be free flowing

• Includes broths, milks, and infusions

• Measure turbidity• Example: Nutrient

Broth, Methylene Blue Milk, Thioglycollate

Page 67: How many arrows do you see in the following shape?

Semi-Solid Semi-Solid MediaMedia

• Exhibits a clot-like consistency at ordinary room temperature

• Determines motility• Used to localize a

reaction at a specific site.

• Example: SIM for hydrogen sulfide production and indole reaction

Page 68: How many arrows do you see in the following shape?

Solid MediaSolid Media

• Firm surface for discrete colony growth• Advantageous for isolating and culturing• Two Types

1. Liquefiable (Reversible)

2. Non-liquefiable• Examples: Gelatin and Agar (Liquefiable)

Rice Grains, Cooked Meat Media,

Potato Slices (Non-liquefiable)

Page 69: How many arrows do you see in the following shape?
Page 70: How many arrows do you see in the following shape?
Page 71: How many arrows do you see in the following shape?

Chemical Composition of Culture MediaChemical Composition of Culture Media

1. Synthetic Media • Chemically defined

• Contain pure organic and inorganic compounds

• Exact formula (little variation)

2. Complex or Non-synthetic Media • Contains at least one ingredient that is not

chemically definable (extracts from plants and animals)

• No exact formula / tend to be general and grow a wide variety of organisms

Page 72: How many arrows do you see in the following shape?

Selective MediaSelective Media

• Contains one or more agents that inhibit the growth of a certain microbe and thereby encourages, or selects, a specific microbe.

• Example: Mannitol Salt Agar encourages the growth of S. aureus.

Page 73: How many arrows do you see in the following shape?

Differential MediaDifferential Media

• Differential shows up as visible changes or variations in colony size or color, in media color changes, or in the formation of gas bubbles and precipitates.

• Example: Spirit Blue Agar to detect the digestion of fats by lipase enzyme. Positive digestion (hydrolysis) is indicated by the dark blue color that develops in the colonies.

Page 74: How many arrows do you see in the following shape?
Page 75: How many arrows do you see in the following shape?

Growth of Staphylococcus aureus on Manitol Salt Agar results in a color change in the media from pink to yellow.

Page 76: How many arrows do you see in the following shape?
Page 77: How many arrows do you see in the following shape?

Enrichment MediaEnrichment Media

• Is used to encourage the growth of a particular microorganism in a mixed culture.

• Ex. Manitol Salt Agar for S. aureus

Page 78: How many arrows do you see in the following shape?

Microbes are Managed and Characterized Microbes are Managed and Characterized by Implementing the Five I’sby Implementing the Five I’s

1. Inoculation

2. Incubation

3. Isolation

4. Inspection

5. Identification

Page 79: How many arrows do you see in the following shape?

InoculationInoculation

• Sample is placed on sterile medium providing microbes with the appropriate nutrients to sustain growth.

• Selection of the proper medium and sterility of all tools and media is important.

• Some microbes may require a live organism or living tissue as the inoculation medium.

Page 80: How many arrows do you see in the following shape?

IncubationIncubation

• An incubator can be used to adjust the proper growth conditions of a sample.

• Need to adjust for optimum temperature and gas content.

• Incubation produces a culture – the visible growth of the microbe on or in the media

Page 81: How many arrows do you see in the following shape?

IsolationIsolation

• The end result of inoculation and incubation is isolation.

• On solid media we may see separate colonies, and in broth growth may be indicated by turbidity.

• Sub-culturing for further isolation may be required.

Page 82: How many arrows do you see in the following shape?

InspectionInspection• Macroscopically observe cultures to note color,

texture, size of colonies, etc.

• Microscopically observe stained slides of the culture to assess cell shape, size, and motility.

Page 83: How many arrows do you see in the following shape?
Page 84: How many arrows do you see in the following shape?
Page 85: How many arrows do you see in the following shape?

FYI

Page 86: How many arrows do you see in the following shape?

IdentificationIdentification

• Utilize biochemical tests to differentiate the microbe from similar species and to determine metabolic activities specific to the microbe.

• Utilize immunologic tests and genetic analysis.

The Major Purpose of the 5 I’s is to Encourage Growth of a Microorganism so that the Lab Worker Can Determine the Type of Microbe, Usually to the Level of Species.