hey kim, this site shows the kids everything! ny ‘09 use this for the prelab stuff!! ...

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• Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!! • http:// faculty.clintoncc.suny.edu/ faculty/Michael.Gregory/files/Bio %20100/Bio%20100%20Laboratory/ Bacterial%20Transformation/ transformation.htm

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Page 1: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

• Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!

• http://faculty.clintoncc.suny.edu/faculty/Michael.Gregory/files/Bio%20100/Bio%20100%20Laboratory/Bacterial%20Transformation/transformation.htm

Page 2: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

AP Bio

Lab #6B

pGLO Bacterial Transformation

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Page 3: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

Aequorea victoria

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has a GFP gene= a gene that codes for Green Fluorescent Protein

Page 4: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

has been added to the pGLO plasmid

GFP = a gene that codes for Green Fluorescent Protein

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Page 5: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

Lets look @ the Plasmid map you will be inserting:

ori = origin of replication

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Page 6: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

araC = operon promoter site remember: this is where RNA polymerase binds to the DNA

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Page 7: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

Plasm

id m

ap:

bla = gene that codes for B-lactamase… a protein that makes resistance to ampicillin (it breaks the

ampicillin down!!)

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Page 8: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

MATERIALS

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LB/amp LB/amp

LB/amp/ara LB

+

-

Page 9: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

4 plates +1 STARTER PLATE

• +pGLO LB/amp w/ plasmid

• +pGLO LB/amp/ara w/ plasmid

• -pGLO LB/amp w/o plasmid

• -pGLO LB w/o plasmid

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LB/amp LB/amp

LB/amp/ara LB

+-

Page 10: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

1 STARTER PLATE

• E. coli on Luria

Broth (LB) media

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Page 11: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

Know your pipettor!!

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Page 12: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

HERE WE GO…• In order to induce transformation competence, bacterial cells are first treated with an ice-cold solution of calcium chloride.

• It is believed that the positive calcium chloride binds to the negatively charged DNA strands.

• It then binds to the cell membrane

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Page 13: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

Transferring Bacteria

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• Organisms are transferred by using a sterile loop and reaching in from the side while keeping the plate covered as much as possible. This technique minimizes the risk of contamination from above.

Page 14: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

• Immerse a sterile loop into the bottle containing plasmid DNA. When the center of the loop is coated with a soap-like film, transfer it to the “+” DNA microtube.

• Use a new sterile loop to transfer a second loopful of plasmid DNA into the same (+ DNA) microtube.

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Page 15: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

• The - DNA microtube will not receive any plasmid DNA.

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Page 16: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

4 plates

• +pGLO LB/amp + = plasmid added

• +pGLO LB/amp/ara

+ = plasmid added• -pGLO LB/amp

- = no plasmid

• -pGLO LB

- = no plasmid

Page 17: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

The Arabinose Operon

araCaraB araB araB

These code for digestive enzymes that break down arabinose sugar

arabinose sugar

araCaraB araB araB

RNA polymerase

araCaraB araB araB

RNA polymerase

mRNA

Page 18: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

The Expression of GFP

araCGFP

Our plasmid’s ara Operon has been genetically altered, the regulatory

genes have been replaced w/ the GFP gene from the jelleyfish

arabinose sugar

araC RNA polymerase

araCaraB

RNA polymerase

mRNA

GFP

Page 19: Hey Kim, this site shows the kids everything! NY ‘09 use this for the prelab stuff!!  Michael.Gregory/files/Bio%20100/Bio%

Results

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