profilejjeyakanthan.bioinfoau.org/[email protected] research forebearance...

PROFILE

Dr. J. JEYAKANTHAN

Professor and Head

Department of Bioinformatics

Alagappa University

Karaikudi-630 004

Tamil Nadu, India

Dr. J. JEYAKANTHAN

Professor and Head

Department of Bioinformatics

#402, 4th Floor, Science Block

Alagappa University

Karaikudi-630 004

Tamil Nadu, India

Phone

Mobile

Fax

E -mail

Website

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+ 91-4565 - 230725

+91-9789809245

+ 91-4565 - 225202

[email protected]

[email protected]

www.jjeyakanthan.bioinfoau.org

RESEARCH FOREBEARANCE

Position Institute/University Period

Professor and Head Department of Bioinformatics Mar 2010 - till date

Research Scientist SPring-8, Japan May 2007 - Mar 2010

Researcher RIKEN Harima Institute, SPring-8, Japan Jun 2003 - May 2007

PDF Indian Institute of Science, Bangalore Jan 2000 - May 2003

ACADEMIC COMPETENCE

Year of Passing Degree University / Institute

2000 Ph.D. Crystallography and Biophysics University of Madras

1995 M. Phil. Physics M. K. University

1993 M.Sc. Physics M. K. University

1991 B.Ed. University of Madras

1999 P.G.D.C.A MIT, Anna University

ADDITIONAL RESPONSIBILITIES – ALAGAPPA UNIVERSITY

2017- * : Coordinator, DST-PURSE Program (Phase-II)

2017- * : Coordinator, DST-FIST Program (Level-I)

2016 - * : Member of Syndicate (Governor-Chancellor Nominee).

2016 - * : Member, Research Advisory Committee (RAC).

2016 - * : Academic staff, Anti-Ragging Committee.

2015 - * : Chairperson, School of Biological Sciences.

2013 - * : Coordinator, UGC Innovative Program (PG diploma).

2010 - * : Member of Senate.

2010 - * : Member, Website Maintenance Committee.

2010 - * : Chairman, Board of Studies of Bioinformatics.

OTHER INSTITUTE/UNIVERSITY RESPONSIBILITIES

2015 -* : UGC Nominee for implementation and governance of SAP in Department of Physics, Punjab University, Chandigarh.

2015 - * : Member, Standing Committee on Academic Affairs, Bharathidasan University, Trichy.

2015 - * : Chairman, Board of Studies in Bioinformatics (UG, PG & PG Diploma), Bharathidasan University, Trichy.

2015 - * : Member, Board of Studies in Bioinformatics and Information Technology, Thiruvalluvar University, Vellore.

2015 - * : Member, Board of Studies in Bioinformatics, Bharathiar University, Coimbatore.

2014 - * : Member, Board of Studies in Faculty of Bio and Chemical Engineering, Sathyabama University, Chennai.

ADDITIONAL RESPONSIBILITIES - COMPLETED

2015 - 17 : Director, Directorate of Collaborative Programmes.

2013 - 16 : Bharathidasan University Representative, Board of Studies of Bioinformatics, Holy Cross College, Trichy.

2012 - 16 : Director, Centre for International Relations, Alagappa University

2012 - 15 : Member, Research Advisory Committee, Alagappa University

2012 - 15 : Member, Board of Studies of Bioinformatics, Periyar University, Salem, Tamil Nadu.

2012 - 15 : Member, Board of Studies of Physics, V.H.N.S.N. College, Virudhunagar, Tamil Nadu.

2012 - 13 : Coordinator, Career Guidance & Counseling Cell, Alagappa University

2010 - 16 : Member, Internal Quality Assurance Cell (IQAC).

RESEARCH ENGROSSMENT Broad subject : Structural Biology and Bio-Computing

Area of Specialization : Small and Macro Molecule X-ray Crystallography

Current Research focus

Prof. J. Jeyakanthan has been concentrating on three major thrust areas such as

Structural Biology, Computer Aided Drug Design and Bio-Computing. He has 23 years of

Research experience and been mainly focusing to unravel the Structural and Functional aspects

of important proteins from model organisms Thermus thermophilus HB8, Pyrococcus horikoshii

OT3 and Aquifex aeolicus VF5 that remain unanswered. Additionally, enzymes that control

purine and pyrimidine levels are also been studied. Furthermore, identification of drug leads

through computational screening against life-threatening diseases such as TB, Filariasis, Cancer,

Diabetes, Chikunguinaya, Dengue, Malaria and nosocomial infection. The identified potential

leads will be evaluated by in vitro studies.

TOTAL FUNDS RECEIVED : 491.62 Lakhs

Research Projects Ongoing Research Projects : 05

S. No. Title Position Agency Amount

(Rs in Lakhs) Period Status

1.

Structural insights of SIRT4 protein

from Homo sapiens…………….of Type-

II diabetes

PI ICMR 33.34 2017-

2020 -Ongoing-

2. Identification of potential antifilarial drug ………………………. Brugia malayi

PI DST 69.38 2016-2019

-Ongoing-

3. Structural and Functional ...…………

Stat2 Protein From Homo Sapiens PI

UGC-

RA 37.8* 2016-

2018 -Ongoing-

4. Development of Web Based ………. Fatty acids and Buffers

PI DBT 13.81 2015-

2018 -Ongoing-

5. Identification of novel drug ..... of the pathogen (TWIN Program)

Co-PI DBT-

Twin 73.69 2014-

2017 -Ongoing-

* Inclusive of two years salary Rs. 34.8 Lakhs

Completed Research Projects : 06



1. Structural and Functional Studies ...... from Pyrococcus horikoshii OT3

PI DST 48.98 2013-

2016 -Completed-

2. Structural and Functional …….... Pyrococcus horikoshii OT3 - (AU & IITG)

PI DBT-

Twin 77.00

2013-

2016 -Completed-

3. Structure Determination of ..... and

Identification of Potential Inhibitors. PI DBT 32.16 2012-

2015 -Completed-

4. Structural and Functional Analysis

....from Thermus thermophilus HB8. PI DBT 50.25 2012-

2015 -Completed-

5. Structural and Functional ....... Protein from Pyrococus horikoshii OT3.

PI UGC 12.903 2012-

2015 -Completed-

6. The use of biodiversity as a …….

molecular targets of Tuberculosis Co-PI

DBT-

Twin 83.49 2010-

2013 -Completed-

GRANTS GENERATED UNDER VARIOUS RESEARCH SCHEMES/SUPPORTING PROGRAMMES



1. UGC Innovative Programme – PG Diploma in Structural Pharamacogenomics

Coordinator UGC 54* 2013-2018

-Ongoing-

2. DST-FIST Level-I Coordinator DST 62 2017-2022

-Ongoing-

* Plus two Assistant Professor Salary for the period of five years.

RESEARCH SUPERVISION

Number of Students Currently Completed

• Ph. D 11 -

• Research Assistants 1 8

• M.Phil 1 5

AWARDS & HONORS

Fellowships

• Awarded the IRPHA, India, Post Doctoral Fellowship for the period from August 2001 to May 2003, Indian Institute of Science, Bangalore.

• Awarded the Department of Science and Technology (DST), India, Post Doctoral Fellowship for the period from October 2000 to July 2001, Indian Institute of Science, Bangalore.

• Awarded the Department of Biotechnology (DBT), India, Post Doctoral Fellowship for the period from March 2000 to September 2000, Indian Institute of Science, Bangalore.

• Awarded the Council of Scientific and Industrial Research (CSIR), India, Senior Research Fellowship for the period 1997 – 2000.

National Awards

Awarded the Young Scientist Travel Grant (1999) by Department of Science and

Technology (DST), India.

Elected Fellow (2015) of the Academy of Sciences, Chennai (FASCh.).

UGC nominee (2015) for implementation and governance of SAP in Department of

Physics, Punjab University.

Awarded UGC-Research Award (2016) by University Grants Commission, India.

International Awards

Awarded the Young Scientist Fellow by IUCr, (1999)

Awarded the Young Scientist Travel Grant (1999) by UNESCO

‘Marquis’ Who’s Who Scientific Directory (2007)

MEMBERSHIP IN SCIENTIFIC SOCIETIES Member in American Crystallographic Association

Member in British Crystallographic Association

Life member in Indian Crystallographic Association

Member in the World Directory of Crystallographers

Life Member, Indian Science Congress Association

Journal Editor/Co-Editor/Reviewer

Acta Crystallographica Sections Computational Biology and Chemistry

Gene Journal of Biomolecular Structure and Dynamics

Journal of Microbial Pathogenesis Journal of Molecular Graphics and Modelling

Interdisciplinary Sciences: Computational Life Sciences

Indian Journal of Biochemistry & Biophysics

International Journal of Bioinformatics Research

International Journal of Bioinformatics Research and Applications

Medicinal Chemistry Research Molecular BioSystems

Molecular Biology Reports Plos One

Progress in Biophysics and Molecular Biology, Etc.,

MEMORANDUM OF UNERSTANDING WITH INSTITUTES & UNIVERSITIES

INTERNATIONAL

Memorandum on Joint Research and Academic Programmes, National Synchrotron Radiation research Centre (NSRRC), Taiwan (2014 – 17).

Agreement on Academic Exchange Program School of Science, Osaka University (2010-15).

Memorandum on Student Exchange Program School of Science, Osaka University (2010-15).

Collaborative Research Agreement, RIKEN, Japan (2010-15).

Institute for Protein Research (IPR), Osaka University, Japan (2010-15).

Material Transfer Agreement, RIKEN, Japan (2010-15).

NATIONAL

Memorandum on Academia and Industry training towards application on Protein related studies, GE Healthcare Pvt. Ltd., Karnataka (2017-19)

Memorandum on Joint Research and Academic Programmes, Indian Institute of Technology-Madras, Chennai (2017-22).

Memorandum on Joint Research and Academic Programmes, Sri Ramachandra University, Chennai (2016-21).

CONFERENCE CONVENER/CO-CONVENER/ORGANIZING SECRETARY 9th National Symposium cum Workshop on Recent Trends in Structural Bioinformatics

and Computer Aided Drug Design (SBCADD’2017), Feb. 14th-17th, 2017, Alagappa

University, Karaikudi, Tamil Nadu, India.

World Habitat Day Celebration, Oct. 3rd, 2016, Alagappa University, Karaikudi, Tamil

Nadu, India.

International Conference on Recent Trends in Biosciences-2016 (ICRTB-2016), Apr. 07th

- 09th, 2016, Alagappa University, Karaikudi, Tamil Nadu, India.

8th National Symposium cum Workshop on Recent Trends in Structural Bioinformatics



World Habitat Day Celebration, Oct. 15th, 2015, Alagappa University, Karaikudi, Tamil

Nadu, India.




World Creativity Day celebration, Apr. 21st, 2014, Alagappa University, Tamil Nadu,

India.


and Computer Aided Drug Design (SBCADD’2014), Feb. 18th-21st, 2014, Alagappa



and Computer Aided Drug Design (SBCADD’2013), Feb. 19th-22nd, 2013, Alagappa



and Computer Aided Drug Design (SBCADD’2012), Feb. 20th-23rd, 2012, Alagappa


Nation Youth Day, Jan. 12th, 2012, Alagappa University, Karaikudi, Tamil Nadu, India.

World Water Day, 2011, Alagappa University, Karaikudi, Tamil Nadu, India.

3rd National Symposium cum Workshop on Recent Trends in Structural Bioinformatics

and Computer Aided Drug Design (SBCADD’2010), Dec. 20th-22nd, 2010, Alagappa


SPECIAL / GUEST/ EMINENT SCIENTIST / ENDOWNMENT LECTURES ORGANIZED

International Speakers – 06 National Speakers – 15

VISITING SCIENTIST • Osaka University and RIKEN SPring-8, Japan 22nd -30th June, 2014

• Osaka University and RIKEN SPring-8, Japan 2nd -8th December, 2012

• Osaka University and RIKEN SPring-8, Japan 9th -16th December, 2011

• Osaka University and RIKEN SPring-8, Japan 22nd March- 6th June, 2010

PUBLICATIONS

1. M. Maniyazagan, R. Mariadasse, M. Nachiappan, J. Jeyakanthan, N.K. Lokanath, S. Naveen, G.

Sivaraman, P. Muthuraja, P. Manisankar, T. Stalin, Synthesis of rhodamine based organic nanorods for

efficient chemosensor probe for Al (III) ions and its biological applications, Sensors and Actuators B:

Chemical, Vol. 254, Pages 795-804, 2018.

2. Arumugam Sudha, Jeyaraman Jeyakanthan, Pappu Srinivasan, Green synthesis of silver

nanoparticles using aerial extract and evaluation of their antioxidant, antibacterial and cytotoxic

effects, Resource-Efficient Technologies, 2017.DOI:10.1016/j.reffit.2017.07.002.

3. Singal, B., Balakrishna, A. M., Nartey, W., Manimekalai, M. S. S., Jeyakanthan, J. and Grüber, G.

Crystallographic and solution structure of the N-terminal domain of the Rel protein

from Mycobacterium tuberculosis. FEBS Lett., 2017.DOI:10.1002/1873-3468.12739

4. Ansuman Biswas, Arpit Shukla, Santosh Kumar Chaudhary, Santhosh Rajendran, Jeyaraman

Jeyakanthan, Kanagaraj Sekar. Structural studies of a hyperthermophilic Thymidylate Kinase

enzyme reveal conformational sub-states along the reaction coordinate. FEBS Journal, 284(15),

2527-2544, 2017.

5. Ansuman Biswas, Arpit Shukla, R. S. K. Vijayan, Jeyaraman Jeyakanthan and K. Sekar. Crystal

structures of an archaeal Thymidylate kinase from Sulfolobus tokodaii provide insights into the role of

a conserved active site Arginine residue. J Struct Biol., 197(3):236-249, 2017.

6. Rajamanikandan S, Jeyaraman J, Pappu S. Binding mode exploration of LuxR-thiazolidinedione

analogues, e-pharmacophore based virtual screening in the designing of LuxR inhibitors and its

biological evaluation. J Biomol Struct Dyn, 35(4):897-916, 2017.

7. M. Maniyazagana, C. Rameshwaran, R. Mariadasse, J. Jeyaraman, K. Premkumar, T. Stalin.

Fluorescence Sensor for Hg2+and Fe3+ ions using 3,3′–Dihydroxybenzidine:α–Cyclodextrin

Supramolecular Complex: Characterization, in-silico and Cell Imaging Study. Sens Actuators B Chem.,

Vol 242, PP: 1227–1238, 2017.

8. Jayashree Biswal, Mutharasappan Nachiappan, Dhamodharan Prabhu, Jeyaraman Jeyakanthan.

Unraveling the importance of Multidrug Efflux Transporter protein from Thermus thermophilus HB8 -

an in silico approach. Research Journal of Medical and Allied Sciences. Vol 1; Issue 1, 2017.

9. Prabhu D, Vidhyavathi R, Jeyakanthan J. Computational identification of potent inhibitors for

Streptomycin 3″-adenylyltransferase of Serratia marcescens. Microb Pathog.103, 94-106, 2017.

10. Rajamanikandan S, Jeyakanthan J, Srinivasan P. Discovery of potent inhibitors targeting Vibrio

harveyi LuxR through shape and e-pharmacophore based virtual screening and its biological

evaluation. Microb Pathog.103, 40-56, 2017.

11. Sundaraj Rajamanikandan, Jeyaraman Jeyakanthan & Pappu Srinivasan. Molecular Docking,

Molecular Dynamics Simulations, Computational Screening to Design Quorum Sensing Inhibitors

Targeting LuxP of Vibrio harveyi and its Biological Evaluation. Appl Biochem Biotechnol. 181, 192-

218, 2017. 12. M. Maniyazagan, R. Mariadasse, J. Jeyakanthan, N.K. Lokanath, S. Naveen, K. Premkumar, P.

Muthuraja, P. Manisankar, T. Stalin. Rhodamine based “turn–on” molecular switch FRET–sensor for

cadmium and sulfide ions and live cell imaging study. Sens Actuators B Chem., 238, 565-577, 2017.

13. Kanagarajan Surekha, Mutharasappan Nachiappan, Dhamodharan Prabhu, Sanjay Kumar Choubey,

Jayashree Biswal and Jeyakanthan Jeyaramam. Identification of potential inhibitors for oncogenic

target of Dihydroorotate dehydrogenase using In silico approaches. J Mol Struct., 1127, 675-688,

2017.

14. Dakshinamurthy Sasikala, Jeyaraman Jeyakanthan, Pappu Srinivasan. Structure-based virtual

screening and biological evaluation of LuxT inhibitors for targeting quorum sensing through an in

vitro biofilm formation. J Mol Struct., 1127, 322-336, 2017.

15. Choubey SK, Prabhu D, Nachiappan M, Biswal J. Jeyakanthan J. Molecular modeling, dynamics

studies and density functional theory approaches to identify potential inhibitors of SIRT4 protein

from Homo sapiens: a novel target for the treatment of type 2 diabetes. J Biomol Struct Dyn. Nov

18:1-14, 2016.

16. Sanjay K. Choubey, Jeyaraman Jeyakanthan. A mechanistic approach to explore novel HDAC1

inhibitor using pharmacophore modeling, 3D- QSAR analysis, molecular docking, density functional

and molecular dynamics simulation study. J Mol Graph Model. 70, 54-69, 2016. 17. Sanjay K. Choubey, Richard Mariadasse, Santhosh Rajendran, Jeyaraman Jeyakanthan. Identification

of novel histone deacetylase 1 inhibitors by combined pharmacophore modeling, 3D-QSAR analysis,

in silico screening and Density Functional Theory (DFT) approaches. J Mol Struct., 1125, 391-404,

2016.

18. Sudha, A., Jeyakanthan, J. & Srinivasan, P. Protective effect of 5-hydroxy-3′,4′,7-trimethoxyflavone

against inflammation induced by lipopolysaccharide in RAW 264.7 macrophage: in vitro study and in

silico validation. Med Chem Res. 25, 1754-1767, 2016.

19. Ansuman Biswas, Subbarao Jasti, J. Jeyakathan and K. Sekar. Role of sequence evolution and

conformational dynamics in the substrate specificity and oligomerization mode of thymidylate

kinases. J Biomol Struct Dyn.35 (10), 2136-2154, 2016.

20. Guru Raj Rao R, Biswal J, Prabhu D, Sureka K, Jeyakanthan J. Identification of Potential Inhibitors for

AIRS from de novo purine biosynthesis pathway through Molecular modeling Studies - A

Computational approach. J Biomol Struct Dyn. 2016: May 1-15 (Epub)

21. S. Jagadeeshan, A. Subramanian, S. Tentu, S. Beesetti, M. Singhal, S. Raghavan, R. P. Surabhi, J.

Mavuluri, H. Bhoopalan, J. Biswal, R. S. Pitani, S. Chidambaram, S. Sundaram, R. Malathi, J. Jayaraman,

A. S. Nair, G. Venkatraman, and S. K. Rayala. p21 activated kinase 1 (Pak1) signaling influences

therapeutic outcome in pancreatic cancer. Annals of Oncology. 2016. DOI:10.1093/annonc/mdw184.

22. R. Santhosh, S.N. Satheesh, M. Gurusaran, Daliah Michael, K. Sekar and J. Jeyakanthan. NIMS: A

database on Nucleobase compounds and their Interactions in Macromolecular Structures. Journal of

Applied Crystallography.49, PP:1093-1098, 2016.

23. D Sasikala, J Jeyakanthan, P Srinivasan. Structural insights on identification of potential lead

compounds targeting WbpP in Vibrio vulnificus through structure-based approaches. Journal of

Receptors and Signal Transduction Res. Oct 36 (5), 515-30, 2016.

24. Surekha K, Prabhu D, Richard M, Nachiappan M, Biswal J, Jeyakanthan J. Investigation of vital

pathogenic target orotate phosphoribosyltransferases (OPRTase) from Thermus thermophilus HB8:

Phylogenetic and molecular modeling approach. Gene. 583(2):102-11, 2016.

25. M Richard, J Biswal, J Prajisha, GR Rao, SK Choubey, R Santhosh and J Jeyakanthan. Mechanical

insights of Oxythiamine compound as potent inhibitor for Human Transketolase like protein 1

(TKTL1 protein). Journal of Receptors and Signal Transduction Res. 36(3):233-42, 2016.

26. Gowri M, Beaula WS, Biswal J, Prabhu D, Saiharish R, Rohanprasad S, Pitani R, Kandaswamy D,

Raghunathan R, Jeyakanthan J, Rayala SK, Ganesh V. β-lactam substituted polycyclic fused

pyrrolidine/pyrrolizidine derivatives eradicate C. albicans in an ex vivo human dentinal tubule model

by inhibiting sterol 14-α demethylase and cAMP pathway. Biochim Biophys Acta- General Subjects.

1860(4). pp:636-647. 2016.

27. Gogoi, P., Srivastava, A., Jayaprakash, P., Jeyakanthan, J. and Kanaujia, S.P. In silico analysis suggests

that PH702 and PH0208 encode for methylthioribose-1-phosphate isomerase and ribose-1,5-

bisphosphate isomerase, respectively, rather than aIF2Bβ and aIF2Bδ. Gene, 575, pp:118-126, 2016.

28. Ravi M, Tentu S, Baskar G, Rohan Prasad S, Raghavan S, Jayaprakash P, Jeyakanthan J, Rayala SK,

Venkatraman G. Molecular mechanism of anti-cancer activity of phycocyanin in triple-negative breast

cancer cells. BMC Cancer. 15(1) PP:768. 2015.

29. Meiyazhagan G, Raju R, Winfred SB, Mannivanan B, Bhoopalan H, Shankar V, Sathiya S, Deepa

Parvathi V, Ravishankar P, Venkatesh babu N, Malini T, Kandaswamy D, Jeyakanthan J, Raghunathan

R, Ganesh V. Bioactivity Studies of β-Lactam Derived Polycyclic Fused Pyrroli-Dine/Pyrrolizidine

Derivatives in Dentistry: In Vitro, In Vivo and In Silico Studies. PLoS ONE 10(7): e0131433.

doi:10.1371/journal. pone.0131433, 2015.

30. K. Manjunath, J. Jeyakanthan and K. Sekar. Catalytic pathway, substrate binding and stability in

SAICAR synthetase: A Structure and Molecular dynamics study. Journal of Structural Biology 191(1)

PP:22-31, 2015.

31. Seenivasan K Devi, Vishnu Priyanka R Chichili, Jeyakanthan J, D. Velmurugan, J. Sivaraman.

Structural basis for the hydrolysis of ATP by a nucleotide binding subunit of an amino acid ABC

transporter from Thermus thermophilus. Journal of Structural Biology 190(3) PP:367-72, 2015.

32. Surekha K, Nachiappan M, Prabhu D, Muthukumaran J, Krishna R, Jeyakanthan J. Exploring the

structural features of Aspartate Trans Carbamoylase (TtATCase) from Thermus thermophilus HB8

through in silico approaches: A potential drug target for inborn error of pyrimidine

metabolism. Journal of Biomolecular Structure & Dynamics 32(4), PP: 591-601, 2014.

33. L. Karthik, M. Nachiappan, D. Velmurugan, J. Jeyakanthan, K. Gunasekaran. Crystal structure analysis

of L-fuculose-1-phosphate aldolase from Thermus thermophilus HB8 and its catalytic action: as

explained through in silico. J. Struct. Funct. Genomics 14(2) PP:59-70, 2013

34. Santosh Kumar Chaudhary, J.Jeyakanthan, K.Sekar. Cloning, expression, purification, crystallization

and preliminary X-ray crystallographic study of thymidylate kinase(TTHA1607) from Thermus

thermophillus HB8. Acta Cryst. F69, PP: 118-121, 2013.

35. T. Balakrishnan, K. Ramamurthi, J.Jeyakanthan and S. Thamotharan.catena-Poly[[[aqua(glycine-

κO)lithium]-µ-glycine-κ2O:O′] bromide]. Acta Cryst. E69, m60–m61, 2013.

36. Kavyashree Manjunath, Shankar prasad kanaujia, K.Surekha, J.Jeyakanthan, K.Sekar. Structure of

SAICAR synthetase fromPyrococcus horikoshii OT3:Insights into thermal stability. International

Journal of Biological Macromolecules. 53, pp:7-19, 2013.

37. Saranya N, Jeyakanthan J, Selvaraj S. Impact of protein binding cavity volume (PCV) and ligand

volume (LV) in rigid and flexible docking of Protein-ligand complexes. Bioorganic & Medicinal

Chemistry Letters. 22(24) pp:7593-7597, 2012.

38. Grover, A., Katiyar, S.P., Jeyakanthan, J., Dubey, V. and Sundar, D. Blocking Protein Kinase C signaling

pathway: mechanistic insights into the anti-leishmanial activity of prospective herbal drugs

from Withania somnifera. BMC Genomics 13(7): S20, 2012.

39. M. Uthayakumar, B. Benazir, Sanjeev Patra, M. Kirti Vaishnavi, M. Gurusaran, K. Sureka, Jeyaraman

Jeyakanthan and K. Sekar. Homopeptide Repeats: Implications in protein structure, function and

evolution. Genomics, Proteomics and Bioinformatics.10(4), pp: 217-225, 2012.

40. Abhinav Grover, Shashank Prakash Katiyar, Jeyaraman Jeyakanthan, Vikash Kumar Dubey and

Durai Sundar. Mechanistic insights into the dual inhibition strategy for checking

Leishmaniasis. Journal of Biomolecular Structure and Dynamics. 30(4), pp:439–452, 2012.

41. Anita R. Chacko, J. Jeyakanthan, G. Ueno, K. Sekar, C. Durga Rao, Eleanor J. Dodson, Kaza Suguna and

Randy J. Read. A new pentameric structure of rotavirus NSP4 revealed by molecular

replacement. Acta Crystallographica Section D, D68, pp: 57–61, 2012.

42. Kh. Dhanachandra Singh, Palani Kirubakaran, Shanthi Nagarajan, Sugunadevi Sakkiah, Karthikeyan

Muthusamy, D.Velmurgan, Jeyaraman Jeyakanthan. Homology Modeling, Molecular Dynamics, e-

Pharmacophore mapping and Docking Study of Chikungunya Virus nsP2 Protease. Journal of

molecular modeling, 18(1), pp: 39-51, 2012.

43. Anita R.Chacko, Mohammed Arifullah, Narayan P. Sastri, Jeyaraman Jeyakanthan, Go Ueno,

Kanagaraj Sekar, Randy J. Read, Eleanor J. Dodson, Durga C. Rao and Kaza Suguna. A Novel

Pentameric Structure of the Diarrhea-inducing Region of the Rotavirus Enterotoxigenic Protein

NSP4. Journal of Virology, 85(23), pp: 12721-12732, 2011.

44. J. Muthukumaran, P. Manivel, M. Kannan, J. Jeyakanthan and R. Krishna. Advancement in

computational analysis methods of plant antifreeze proteins (AFPs): An application towards

classification and gene expression studies of leucine rich repeat (LRR) and ice-recrystallization

inhibition domain (IRI) containing AFPs. Journal of Computational Biology and Bioinformatics

Research, 3(6), pp: 63-82, 2011.

45. Srinivasan P, Prasanth Kumar S, Karthikeyan M, Jeyakanthan J, Jasrai YT, Pandya HA, Rawal RM and

Patel SK. Epitope-based immunoinformatics and molecular docking studies of Nucleocapsid protein

(NP) and Ovarian Tumor (OTU) domain of Crimean-Congo haemorrhagic fever virus

(CCHFV). Frontiers in Genetics, Vol. 2, pp: 2-9, 2011.

46. Kojiro Mimura, Shinya Hosokawa, Naohisa Happo, Wen Hu, Kouichi Hayashi, Kazuki Wakita, Hirofumi

Ishii, Masato Yoshimura, Jeyaraman Jeyakanthan and Nazim Mamedov. Three Dimensional Atomic

Image of TlInSe2 by X-ray Fluorescence Holography. e-J. Surf. Sci. Nanotech. Vol. 9, pp: 273-276,

2011.

47. J. Muthukumaran, M. Nachiappan, S. Chitra, S. Muthusubramanian, Suman Bhattacharya, P.

Manisankar, R. Krishna and J. Jeyakanthan. 1-(2-Naphthyl)-3-phenyl-3-(4,5,6,7-tetrahydro-1,2,3-

benzoselenadiazol-4-yl)-propan-1-one. Acta Cryst.E67, pp: o2010-o2011, 2011.

48. J. Muthukumaran, M. Nishandhini, S. Chitra, P. Manisankar, S. Bhattacharya, S. Muthusubramanian, R.

Krishna and J. Jeyakanthan. 3-(4-Methylphenyl)-1-phenyl-3-(4,5,6,7-tetrahydro-1,2,3-benzoselenad

iazol- 4-yl)-1-propanone. Acta Cryst. E67, pp: o1660-o1661, 2011.

49. Shinya Hosokawa, Naohisa Happo, Kouichi Hayashi, Kojiro Mimura, Kazuki Wakita, Wen Hu, Hirofumi

Ishii, Masato Yoshimura, Jeyaraman Jeyakanthan, and Nazim Mamedov. Three-Dimensional Atomic

Images of TlInSe2 Thermoelectric Material Obtained by X-ray Fluorescence Holography. Jpn. J. Appl.

Phys. 50, pp: 05FC06, 2011.

50. J. Muthukumaran, P. Manivel, M. Kannan, J. Jeyakanthan and R. Krishna. A framework for

classification of antifreeze proteins in over wintering plants based on their sequence and structural

features. Journal of Bioinformatics and Sequence Analysis Vol. 3(4), pp: 70-88, 2011. ISSN 2141-

2464

51. J. Muthukumaran, M. Nishandhini, S. Chitra, S. Muthusubramanian, P. Manisankar, S. Bhattacharya, R.

Krishna and J. Jeyakanthan. 4-{(4-Chlorophenyl)[4-(4-methylphenyl)-1,2,3-selenadiazol-5-yl]methyl

}-4,5,6,7-tetrahydro-1,2,3-benzoselenadiazole. Acta Cryst. E67, pp: o1421-o1422, 2011.

52. Malathy Sony Subramanian Manimekalai, Anil Kumar, Jeyaraman Jeyakanthan and Gerhard Grüber.

Insights into the chemical mechanism of the transition like state of the biological engine A-ATP

synthase. J.Mol.Biol.,V408, pp: 736-754,2011.

53. Shankar Prasad Kanaujia, Jeyaraman Jeyakanthan, Akeo Shinkai, Seiki Kuramitsu Shigeyuki

Yokoyama and Kanagaraj Sekar. Crystal structures, dynamics and functional implications of

molybdenum cofactor biosynthesis protein MogA from two thermophilic organisms. Acta Cryst. F67,

pp: 2-16, 2011.

54. Kanaujia SP, Jeyakanthan J, Nakagawa N, Balasubramaniam S, Shinkai A, Kuramitsu S, Yokoyama S,

Sekar K. Structures of apo and GTP-bound molybdenum cofactor biosynthesis protein MoaC

from Thermus thermophilus HB8. Acta Cryst. D66, pp: 821-33, 2010.

55. Kumar A, Manimekalai MS, Balakrishna AM, Priya R, Biuković G, Jeyakanthan J, Grüber G. The Critical

Roles of Residues P235 and F236 of Subunit A of the Motor Protein A-ATP Synthase in P-Loop

Formation and Nucleotide Binding. J. Mol. Biol. Vol 492, pp: 892-905, 2010.

56. Asha Manikkoth Balakrishna, Malathy Sony Subramanian Manimekalai, Cornelia Hunke, Shovanlal Ga,

Manfred Roessle,Jeyaraman Jeyakanthan and Gerhard Gruber. Crystal and solution structure of the

C-terminal part of theMethanocaldococcus jannaschii A1AO ATP synthase subunit E revealed by X-ray

diffraction and small-angle X-ray scattering. J Bioenerg Biomembr. Vol 42, pp: 311-320, 2010.

57. Jeyakanthan J, Kanaujia SP, Nishida Y, Nakagawa N, Praveen S, Shinkai A, Kuramitsu S, Yokoyama S,

Sekar K. Free and ATP-bound structures of Ap4A hydrolase from Aquifex aeolicus V5. Acta Cryst.

D66, pp: 116-24, 2010.

58. Alikhajeh J, Khajeh K, Ranjbar B, Naderi-Manesh H, Lin YH, Liu E, Guan HH, Hsieh YC, Chuankhayan P,

Huang YC,Jeyakanthan J, Liu MY, Chen CJ. Structure of Bacillus amyloliquefaciens alpha-amylase at

high resolution: implications for thermal stability. Acta Cryst. F66, pp: 121-129, 2010.

59. J. Jeyakanthan, Randy M. Drevland, D. Gayathri, D. Velmurugan, S. Kuramitsu, A. Shinkai, Shigeyuki

Yokoyama and David E. Graham. Substrate specificity determinants of the methanogen

homoaconitase enzyme: structure and function of small subunit residues. Biochemistry. 30; Vol 49,

12, pp: 2687-2696, 2010.

60. Ardina Grüber, Malathy Sony Subramanian Manimekalai, Asha M. Balakrishna, Cornelia

Hunke, Jeyaraman Jeyakanthan, Peter Rainer Preiser and Gerhard Grüber. The first structural and

mechanistic determination of functional units of the nucleotide binding domain (NDB94) of the

reticulocyte binding protein Py235 of Plasmodium yoelii. PLoS, V5, 2, e9146, 2010.

61. Vikas Gupta, N. A. Udayaprakash, V. Lakshmi, R. Boopathy, J. Jeyakanthan, D.Velmurugan and K.

Sekar. Recognition of active and in-active catalytic triads: A template based approach Int. J. Biological

Macromolecules, V46, Vol 3, pp: 317-323, 2010.

62. Jeyaraman Jeyakanthan, Subbiah Thamotharan, Santosh Panjikar, Yoshiaki Kitamura, Nakagawa

Noriko, Akeo Shinkai, Seiki Kuramitsu and Shigeyuki Yokoyama. Expression, purification and X-ray

analysis of 1, 3-Propanediol Dehydrogenase (Aq_1145) from Aquifex aeolicus VF5. Acta Cryst. F66,

pp: 184-186, 2010.

63. Kavyashree Manjunath, Jeyaraman Jeyakanthan, Noriko Nakagawa, Akeo Shinkai, Masato

Yoshimura, Seiki Kuramitsu, Shigeyuki Yokoyama and Kanagaraj Sekar. Cloning, expression,

purification, crystallization and preliminary X-ray crystallographic study of putative SAICAR

synthetase (PH0239) from Pyrococcus horikoshii OT3. Acta Cryst. F66, pp: 180-183, 2010.

64. Anil Kumar, Malathy Sony Subramanian Manimekalai, Asha Manikkoth Balakrishna, Jeyaraman

Jeyakanthan and Gerhard Grüber. Nucleotide-binding states of subunit A of the A-ATP synthase and

the implication of P-loop switch in evolution. J. Mol.Biol. Vol 396, pp: 301-320, 2010.

65. K. Hemavathi, M. Kalaivani, A. Udayakumar, G. Sowmiya, J. Jeyakanthan and K.Sekar. MIPS: Metal

Interactions in Protein Structures. J. of Appl. cryst. Vol 43, pp: 196-199, 2010.

66. Hong Hsiang Guan, King Siang Goh, Fabian Davamani, Po Long Wu, Yen Wei Huang, Jeyakanthan

Jeyaraman, Wen guey Wu, and Chun Jung Chen. Structures of two elapid snake venom

metalloproteases with distinct activities highlight the disulfide patterns in the D domain of

ADAMalysin family proteins. J. Struct. Biol. Vol 169, pp: 294-303, 2010.

67. Yuan-Lan Chiang, Yin-Cheng Hsieh, Jou-Yin Fang, En-Hong Liu, Yen-Chieh Huang, Phimonphan

Chuankhayan,Jeyakanthan Jeyaraman, Ming-Yih Liu, Sunney I. Chan and Chun-Jung Chen. Crystal

Structure of Adenylylsulfate Reductase from Desulfovibrio gi 1 gas suggests a Potential Self-regulation

Mechanism Involving the C-terminus of the β-subunit. J. Bacteriol, Vol 191, Issue 24, pp: 7597-7608,

2009.

68. Jeyaraman Jeyakanthan, Subbiah Thamotharan, Devadasan Velmurugan, Vaijayanthimala Surya

Narayna Rao, Shanthi Nagarajan, Akeo Shinkai, Seiki Kuramitsu and Shigeyuki Yokoyama. New

Structural Insights and Molecular Modeling Studies of 4-Methyl-5-hydroxyethylthiazole Kinase

from Pyrococcus horikoshii OT3 (PhThiK). Acta Cryst. F65, pp: 978-986, 2009.

69. Jeyaraman Jeyakanthan, Katsumi Takada, Masahide Sawano, Kyoko Ogasahara, Hisashi Mizutani,

Naoki Kunishima, Shigeyuki Yokoyama, and Katsuhide Yutani. Crystal Structural and functional

analysis of the Putative Dipeptidase from Pyrococcus horikoshii OT3. J. Biophysics. pp: 1-12, 2009.

70. Jey-Jau Lee, S. Thamotharan, J. Jeyakanthan, R. Bansal and R. Yadav. Structure determination on

Asthmatic Drugs by synchrotron powder diffraction, Acta Cryst. A65, S324, 2009.

71. L. -C. Chen, S. -C. Huang, P. Chuankhayan, C. -D. Chen, Y. -C. Huang, J. Jeyakanthan, H.-F. Pang, L.-C.

Men, Y.-C. Chen, Y.-K. Wang, M.-Y. Liu, T.-K. Wu and C.-J. Chen. Purification, crystallization and

preliminary X-ray crystallographic analysis of xylose reductase from Candida tropicalis. Acta

Cryst. F65, pp: 419-42, 2009.

72. Jeyaraman Jeyakanthan, Masato Yoshimurura, Go Ueno, Yu-Shan Huang, Chi-Yi Huang, Masaki

Yamamoto, Ku-Ding Tsuei and Hirofumi Ishii. Installation of High Throughput Protein

Crystallography Data Collection at SPring-8 BL12B2. Acta Cryst. A61, C173-174, 2008.

73. Jeyaraman Jeyakanthan, Sarani Rangarajan, P. Mridula, Yoshitsugu Shiro, Seiki Kuramitsu,

Shigeyuki Yokoyama, Kanagaraj Sekar. Observation of a calcium-binding site in the γ-class Carbonic

anhydrases from Pyrococcus horikoshii. Acta Cryst. D64, pp: 1012-1019, 2008.

74. Hideaki Mizuno, Tapas Kumar Mal, Markus Walchli, Akihiro Kikuchi, Takashi Fukanao, Ryoko

Ando, Jeyaraman Jeyakanthan, Junichiro Taka Yoshitsugu Shio, Mitsuhiko Iku and Atsushi

Miyawaki. Light-dependent regulation of structural flexibllity in a photochromic fluorescent

protein. PNAS. Vol 105, pp: 9227-9232, 2008.

75. Rangarajan Sarani, Jeyaraman Jeyakanthan, Palappetty Mridula, Keiko Sakamoto, Yoshiaki

Kitamura, Yoshihiro Agari, Akeo Shinkai, Akio Ebihara, Seiki Kuramitsu, Shigeyuki Yokoyama,

Kanagaraj Sekar. Crystallization and preliminary crystallographic studies of L30e, a ribosomal

protein from Methanocaldococcus jannaschii (MJ1044). Acta Cryst. F64, pp: 102-104, 2008.

76. Shankar B A G, Sarani R, Michael D, Mridula P, Ranjani V, Sowmiya G, Vasundhar B, Sudha

P, Jeyakanthan J, Velmurugan D and Sekar K. Ion pairs in non-redundant protein structures J.

Biosci. Vol 32, pp: 693–704, 2007.

77. Shankar Prasad Kanaujia, Chellamuthu Vasuki Ranjani, Jeyaraman Jeyakanthan, Miwa Ohmori,

Kazuko Agari, Yoshiaki Kitamura, Seiki Baba, Akio Ebihara, Akeo Shinkai, Seiki Kuramitsu, Yoshitsugu

Shiro, Kanagaraj Sekar, Shigeyuki Yokoyama. Cloning, expression, purification, crystallization and

preliminary X-ray crystallographic study of molybdopterin synthase from Thermus

thermophilus HB8. Acta Cryst. F63, pp: 324-326, 2006.

78. Shankar Prasad Kanaujia, Chellamuthu Vasuki Ranjani, Jeyaraman Jeyakanthan, Masami Nishida,

Yoshiaki Kitamura, Seiki Baba, Akio Ebihara, Nobutaka Shimizu, Noriko Nakagawa, Akeo Shinkai,

Masaki Yamamoto, Seiki Kuramitsu, Yoshitsugu Shiro, Kanagaraj Sekar, Shigeyuki Yokoyama.

Preliminary X-ray crystallographic study of glucose dehydrogenase from Thermus

thermophilus HB8 Acta Cryst. F63, pp: 450-453, 2006.

79. Shankar Prasad Kanaujia, Chellamuthu Vasuki Ranjani, Jeyaraman Jeyakanthan, Seiki Baba, Akio

Ebihara, Akeo Shinkai, Seiki Kuramitsu, Yoshitsugu Shiro, Kanagaraj Sekar, Shigeyuki Yokoyama.

Cloning, expression, purification, crystallization and preliminary X-ray crystallographic Study of

DHNA synthetase from Geobacillus kaustophilus. Acta Cryst. F63, pp: 103-105, 2006.

80. Shankar Prasad Kanaujia, Chellamuthu Vasuki Ranjani, Jeyaraman Jeyakanthan, Seiki Baba, Lirong

Chen, Zhi-Jie Liu, Bi-Cheng Wang, Masami Nishida, Akio Ebihara, Akeo Shinkai, Seiki Kuramitsu,

Yoshitsugu Shiro, Kanagaraj Sekar, Shigeyuki Yokoyama. Crystallization and preliminary

crystallographic analysis of Molybdenum cofactor biosynthesis protein C fromThermus

thermophilus. Acta Cryst. F63, pp: 27-29, 2006.

81. K. Sekar, D. Gayathri, D.Velmurugan, J. Jeyakanthan, T. Yamane, M.-J. Poi and M.-D. Tsai. Third

calcium ion found in an inhibitor-bound phospholipase A2. Acta Cryst. D62, pp: 392-397, 2006.

82. Jeyaraman Jeyakanthan, A. Kikuchi, J. Taka, S. Karasawa, A. Miyawaki and Y. Shiro. Crystal structure

of novel cyan-emitting fluorescent protein from Acropara stony coral. Acta Cryst. A61, C263, 2005.

83. Jeyaraman Jeyakanthan, Junichiro Taka, Akihiro Kikuchi, Chizu Kuroishi, Katsuhide Yutani and

Yoshitugu Shiro. Purification, crystallization and preliminary X-ray crystallographic study of the L-

fuculose-1-phosphate aldolase (FucA) from Thermus thermophilus HB8. Acta Cryst. F61, pp: 1075-

1077, 2005.

84. K. Saikrishnan, G. P. Manjunath, P. Singh, J. Jeyakanthan, Z. Dauter, K. Sekar, K.Muniyappa and M.

Vijayan. Structure ofMycobacterium smegmatis single-stranded DNA-binding protein and a

comparative study involving homologus SSBs: biological implications of structural plasticity and

variability in quaternary association. ActaCryst. D61, pp: 1140-1148, 2005.

85. Taka J, Ogasahara K, Jeyakanthan J, Kunishima N, Kuroishi C, Sugahara M, Yokoyama S, Yutani K.

Stabilization due to dimer formation of phosphoribosyl anthranilate isomerase from Thermus

thermophilus HB8: X-ray Analysis and DSC experiments. J. Biochem. pp: 569-578, 2005.

86. Jeyaraman Jeyakanthan, Eiji Inagaki, Chizu Kuroishi and Tahir H. Tahirov. Structure of PIN-domain

protein PH0500 from Pyrococcus horikoshii OT3. Acta Cryst. F61, pp: 463-468, 2005.

87. K. Saikrishnan, J. Jeyakanthan, J. Venkatesh, N. Acharya, K. Purnapatre, K. Sekar, U.Varshney and M.

Vijayan. Structure ofMycobacterium tuberculosis single-stranded DNA-binding protein. Variability in

Quaternary Structure and its Implications.J.Mol.Biol. pp: 385-393, 2003.

88. V. Rajakannan, M. Yogavel, Ming-Jye Poi, A. Jeya Prakash, J. Jeyakanthan, D.Velmurugan, Ming-Daw

Tsai and K. Sekar. Observation of Additional Calcium Ion in the Crystal Structure of the Triple Mutant

of Bovine Pancreatic Phospholipase A2. J. Mol. Biol.pp: 755-762, 2002.

89. A.S.Z. Hussain, V.Shanthi, S.S.Sheik, J. Jeyakanthan, P.Selvarani and K. Sekar. PDB Goodies – a Web-

based GUI to manipulate the Protein DATA Bank File. Acta Cryst. D58, pp: 1385-1386, 2002.

90. M. Vijayan, J. Jeyakanthan, J. Venkatesh, N. Acharya, K. Sekar, U. Varshney and K.Saikrishnan. The

Crystal structure of the single-stranded DNA-binding protein from Mycobacterium tuberculosis. Acta

Cryst. A58, C275, 2002.

91. K. Saikrishnan, J. Jeyakanthan, J. Venkatesh, N. Acharya, K. Purnapatre, K. Sekar, U.Varshney and M.

Vijayan. Crystallization and preliminary X-ray studies of the single-stranded DNA-binding protein

from Mycobacterium tuberculosis. Acta Cryst. D58, pp:327-329, 2002.

92. M. Kanthimathi, D. Sebanesan, B.U. Nair and J. Jeyakanthan. Effect of molecular association and

reactivity on substitution in chromium (II)-salprn Complexes, Transition Metal Chemistry, V27, pp:

895-901, 2002.

93. J. Jeyakanthan, M. Yogavel T. J. Rajan, D. Velmurugan and K. Sekar. 10-(4-hydroxybenzoylamino)-3,

4, 6, 7, 9, 10-hexahydro-1, 8-(2H, 5H) acridinedione. Crystal Research Technology, Vol 37, pp: 1029-

1037, 2002.

94. J. Jeyakanthan, D.Velmurugan, R. Selvi and P.T.Perumal. 1-(2, 4-dinitrophenyl)-3-(5-methyl-2-

hydroxyphenyl)-1H-pyrazolecarboxaldehyde.Acta Cryst. E57, pp: 474- 476, 2001.

95. Mookandi Kanthimathi, Balachandran Unni Nair and Thirumalachari Ramasami, Jeyaraman

Jeyakanthan and Devadasan Velmurugan. Synthesis, crystal structure and reactivity of trans-diaquo

N, N'-ethylenebis (3-methoxysalicylideneiminato) chromium (III). Transition Metal Chemistry. Vol

25, pp: 145-149, 2000.

96. J. Jeyakanthan, S. Shanmuga Sundara Raj, D.Velmurugan, H.K.Fun, T.Joseph Rajan and

V.T.Ramakrishnan. 10-(benzoylamino)-3,4,6,7,9,10-hexahydro-1,8-(2H,5H)-acridinedione and 10-(4-

methylbenzoylamino)-3,4,6,7,9,10-hexahydro-1,8-(2H,5H)- acridinedione, Acta Cryst. C56, pp: 1109-

1112, 1999. 97. J. Jeyakanthan, D.Velmurugan, R.Selvi and P.T.Perumal. 1-(2, 4-dinitrophenyl)-3-(2-hydroxyphenyl)-

4-methyl-1H-pyrazole Acta Cryst. C55, pp: 1926-1928, 1999.

98. S. Shanmuga Sundara Raj, J. Jeyakanthan, D. Velmurugan, H. K. Fun, R. Selvi and P. T. Perumal. 1-(2,

4-dinitrophenyl)-3-(2-hydroxyphenyl)-1H-pyrazole-4-carboxaldehyde. Acta Cryst. C55, pp: 1667-

1669, 1999.

99. J. Jeyakanthan and D.Velmurugan. The Crystals and Molecular Structures of 1,8- Dioxo-9-(O-

nitrophenyl)-1,2,3,4,5,6,7,8-octahydroxanthene. Crystal Research Technology. Vol. 34, pp: 1339,

1999.

100. J. Jeyakanthan, S.Shanmuga Sundara Raj, D.Velmurugan, H.K.Fun and P.Murugan. Two

tetramethylxanthenediones. Acta Cryst. C55, 1999.

101. J. Jeyakanthan, D.Velmurugan, K. Panneerselvam, Manuel Soriano-Garcia, S.Perumal and

R.Chandrasekaran. Three Diphenyl Sulfones. Acta Cryst. C54, pp: 630-633, 1998.

102. J. Jeyakanthan and D. Velmurugan. 4-Chlorophyenyl 2, 6-DimethylphenylSulfone. Acta Cryst.

C53, pp: 1344-1345, 1997.

103. J. Jeyakanthan, R. Saravanan and S.K. Mohanlal. Temperature Dependence of Core and

valence Thermal Vibrations in Germanium. Physica Status Solidi (b), Vol 190, pp: 415, 1995.

BOOK CHAPTERS / CONTRIBUTION

1. P. Shanmugavel & J. Jeyakanthan. Molecular Interactions. 2015.

PROTEIN DATA BANK CONTRIBUTIONS (PDB’S)

Protein Data Bank Codes (More than 125 Protein Structures) 1GH4, 1UE1, 1UE5, 1UE6, 1UE7, etc., http://www.rcsb.org/pdb/home/home.do

DETAILS OF IMPACT FACTOR, CITATIONS AND H-INDEX

Cumulative Impact Factor : 268.105

H-index : 13

i10 index : 21

Total Citations : 834

EXTERNAL THESIS EXAMNIER / DOCTORAL COMMITTEE MEMBER Thesis Evaluated - 25

All India Institute of Medical Sciences, New Delhi. Bharathidasan University, Tiruchirappalli. Bharathiar University, Coimbatore. Kalasalingam University, Srivilliputhur. Karpagam University, Coimbatore. Karunya University, Coimbatore. Madurai Kamaraj University, Madurai Osmania University, Hyderabad.

Pondicherry University, Puducherry. Sathyabama University, Chennai. University of Mysore, Mysore. VIT University, Vellore.

INAUGURAL/SPECIAL/INVITED LECTURES/ CONFERENCE PRESENTATION

Total No. of Conferences: 100

• Delivered an Invited talk in the Conference on Role of Biophysics in Academia and

Industry organized by the Department of Biophysics, Panjab University, Chandigarh

(October 12th – 13th, 2017).

• Thematic address in the World Animal Day Celebration organized by the Department of

Animal Health and Management (4th October, 2017)

• Felicitation address in the Inaugural Function of National Theme on University –

Industry Interface 2017 (NTM U2I-2017) organized by the Industry and Consultancy

Cell & Department of Physics (20th September, 2017)

• Valedictory address in the Valedictory Function of UGC Sponsored One Day Orientation

Programme on “Know Your Rights – Empower Yourself” (13th September, 2017)

• Delivered an Invited talk in the International Conference on “Frontier Areas in

Chemical Technologies (FACTs)” organized by Department of Industrial Chemistry,

Alagappa University, Karaikudi (July 6th -8th, 2017).

• Felicitation address in UGC Sponsored National Conference on Futuristic Materials

(NCFM-2017) organized by the Department of Physics, Alagappa University, Karaikudi.

(27th March, 2017)

• Valedictory address in Three Days Zonal Level Orientation Training Programme for

YRC Volunteers and YRC Programme Officers organized by the Youth Red Cross,

Alagappa University & Alagappa Chettiar College of Engineering and Technology,

Karaikudi. (22nd March, 2017)

• Felicitation address in Two day training Programme on Campus Interview Skills

organized by the Equal Opportunity and Placement cell, Alagappa University,

Karaikudi. (02nd March, 2017)

• Felicitation address in Business Oriented Hands-on Training on Analytical

Instrumentation (HI-BOAT), Dept. of Physics & Business Collaboration Centre &

Consultancy Cell, Alagappa University, Karaikudi (02nd March, 2017)

• Felicitation address in Two day Workshop on Career Prospects & Developments in

Computer Science organized by the University Business Collaboration Centre & Dept. of

Computer Science, Alagappa University, Karaikudi (27th February, 2017)

• Welcome address in 9th National Symposium cum Workshop on “Recent Trends in

Structural Bioinformatics and Computer Aided Drug Design” organized by the

Department of Bioinformatics, Alagappa University (14th – 17th February, 2017)

• Felicitation address in Awareness Program on First Aid and Basic Life Support

organized by Alagappa University Health Care Centre & Alagappa University College of

Physical Education, Alagappa University, Karaikudi (10th February, 2017)

• Special address in One day Training Program on “LATEX” – A Mathematical Document

Preparation Tool organized by the Department of Mathematics & University Business

Collaboration Centre, Alagappa University, Karaikudi (10th February, 2017)

• Felicitation address in Two-day Workshop on ICT Based Innovative Teaching Methods

in Business Studies (24th January, 2016)

• Inaugural address in Recent Trends in Microbiology organized by Department of

Microbiology, Alagappa University, Karaikudi (20th – 21st November, 2016)

• Inaugural address in Winter Schools organized by National Centre of Excellence

(MHRD), Thiagarajar College, Madurai (21st November, 2016).

• Keynote address in National Workshop on Computational Analysis of Molecular Data”

organized by School of Bio Sciences and Technology, VIT University, Vellore (17th

November, 2016).

• Felicitation address in World Habitat Day Celebration organized by Department of

Bioinformatics and Department of Botany, Alagappa University, Karaikudi (03rd

October, 2016).

• Felicitation address in International Workshop on Data Science and Analytics

organized by Department of Computer Science, Alagappa University, Karaikudi (27th

September, 2016).

• International Workshop on “Molecular Physiology, Therapeutics and Experimental

Medicine organized by Department of Animal Health and Management, Alagappa

University, Karaikudi (06th - 07th September, 2016).

• International Conference on Recent advances in modern medicine: molecular signalling

scenarios in tissues and diseases organized by Sree Balaji Medical College and Hospital,

Chennai (03rd - 04th September, 2016).

• 44th National Seminar on Crystallography (NSC INDIA 2016)” held at Indian Institute of

Science, Education and Research, Pune (10th - 13th July, 2016).

• Chairperson for the Technical Session in the International Conference on Frontier

Areas in chemical technologies-2016 (FACTs-2016) organized by Alagappa University

(21st – 23rd March, 2016).

• Delivered Inaugural address and plenary lecture in the UGC Sponsored National

Seminar on Bio-Cheminformatics organized by Bharathiar University, Coimbatore (26th

February, 2016).

• 6th International Symposium on Current Trends in Drug Discovery Research (CTDDR-

2016) organized by CSIR-Central Drug Research Institute, Lucknow (25th -28th

February, 2016)

• DBT Sponsored Workshop on Application of Bioinformatics in the Control of Infectious

Disease by in silico & in vitro approach organized by Presidency College, Chennai (01st

February, 2016).

• DBT Sponsored Workshop on Biomolecular Modeling & Dynamics organized by Lady

Doak College, Madurai (28th January, 2016).

• Workshop on Structural biology an Introduction to Protein Crystallography,

Department of Biophysics, NIMHANS Bangalore, (April 15th -18th 2015)

• Chairperson for the Technical Session in the National Seminar on Frontier Areas in

Chemical Technologies - 2015 (FACTs - 2015) organized by Alagappa University (06th

March, 2015).

• State Level Seminar on "Beginning PERL for Bioinformatics" organized by Department

of Botany, VHNSN College, Virudhunagar (28th February, 2015).

• UGC Sponsored State level Seminar on Progress in Condense Matter Physics organized

by The Madura College, Madurai (07th January, 2015).

• International Conference on “Computational Intelligence: Health and Disease” and “

DNA 2014: Next Generation DNA Led Technologies, Institute of Bioinformatics and

Computational Biology (IBCB), Viskhapatnam (27th – 28th December, 2014) (Structural

Biology and its importance in drug discovery)

• Karpagam University Annual research Congress-2014 (KUARC-2014) organized by

Karpagam University, Coimbatore (05th December, 2014).

• 43rd National Seminar on Crystallography- 2014, held at CSIR-Central Drug Research

Institute, Lucknow (12th -14th November, 2014).

• Inaugural function of Physics Association organized by Kandaswami Kandar’s College,

Velur (26th September, 2014)

• State level Conference on Advanced Bio Chem Development (ABCD-2014) organized by

Sri Sarada Niketan College for Women, Karaikudi (11th August, 2014).

• National Workshop on Essentials of Bioinformatics organized by Dr. Umayal

Ramanathan College for Women, Karaikudi (04th August, 2014).

• National Seminar on “Recent Trends in Macromolecular Crystallography” organized by

the Centre for Bioinformatics, Pondicherry University, Pondicherry (13th March, 2014).

• National Conference on “Evolutionary Trends in Biological and Pharmaceutical

Chemistry” (NCETBP-2014) held at Holy Cross College, Trichy (31st January, 2014).

• National Workshop on Molecular Modeling and Drug Design, University of Madras,

Chennai (25th -26th January, 2014)

• 6th International Symposium on “Recent Trends in Macromolecular Structure and

Function-2014”, held at University of Madras, Chennai (22nd -24th January, 2014).

• 42nd National seminar on Crystallography, 08th-10th November 2013, All India Institute

of Medical Sciences, New Delhi.

• Chaired a scientific session as Chairperson in World Food Day Celebration organized by

Department of Economics and Rural Development, Alagappa University, Karaikudi

(October 16th, 2013).

• 2nd IIT Madras-Tokyo Tech Joint Symposium on “Techniques and Applications of

Bioinformatics-2013”, held at IIT-Madras, Chennai (27th -28th September, 2013).

• Conference on “Recent Advances in Computational Drug Design-2013”, held at Indian

Institute of Science, Bangalore, Karnataka (16th -17th September, 2013).

• Delivered an Invited Lecture on High Throughput X-ray Crystallography and Bio-

Computing at Department of Zoology, Periyar University, Salem (11th September,

2013).

• Two-Day State level seminar on Advanced Bio Chem Development (ABCD-2013)

organized by Sri Sarada Niketan College for Women, Karaikudi (21th August, 2013).

• REFRESHER COURSE on High throughput X-Ray Crystallography at UGC-Academic Staff

College Bharathiyar University, Coimbatore (05th July, 2013).

• Delivered an Invited Lecture on High throughput X-Ray Crystallography at State level

Seminar on Advanced BioChem Development (ABCD-2013), Sri Sarada Niketan College

for Women, Karaikudi

• Delivered an Invited Lecture on High throughput X-Ray Crystallography at National

Seminar cum Workshop on Fundamentals of Biochematics (Phytochemistry and

Bioinformatics) NSWFB’13, Department of Bioinformatics, Bharathiar University,

Coimbatore (13th February, 2013).

• Delivered an Invited Lecture on High throughput X-Ray Crystallography at UGC

Sponsored National Seminar on Materials Research (NSMR-2013), Virudhanaga Hindu

Nadar’s Senthikumara Nadar College, Virudhanagar (08th February, 2013).

• International Conference on Biomolecular Forms and Functions-2013 organized by

Molecular Biophysics Unit, Indian Institute of Science, Bangalore (January 08th - 11th,

2013).

• International Conference on “Structural and Functional Genomics (ICSAFG)”

organized by School of Chemical and Biotechnology, SASTRA University, Thanjavur

(January 06th - 07th, 2013).

• International conference on Bio-engineering (ICBE-2013) organized by Department of

Biotechnology, Rajalakshmi Engineering College, Chennai (02nd -04th January, 2013).

• REFRESHER COURSE on Nanosciences on 20.12.2012 at UGC-Academic Staff College

Bharathiyar University, Coimbatore.

• EMBO Global Exchange Lecture Course on “Structural and biophysical methods for

biological macromolecules in solution” held at the CSIR-Centre for Cellular and

Molecular Biology (CCMB), Hyderabad (29th November – 06th December 2012).

• Delivered an Invited Lecture on High Throughput X-ray Crystallography at Department

of Bioinformatics, Karunya University, October 24th, 2012.

• International Symposium on Protein Folding and Dynamics organized by NCBS,

Bangalore, October 15th -17th, 2012.

• 41st National seminar on Crystallography, 8th- 10th October 2012, Center of Advanced

study in Crystallography and Biophysics, University of Madras, Chennai.

• National Seminar on Emerging Trends in Structural Biology and Bioinformatics

organized by Bioinformatics Centre, Pondicherry University (September 26th -28th,

2012).

• Delivered Inaugural address and plenary lecture in the Biochemistry Exhibition

BYOKEM “X” BIT organized by Sri Saradha Niketan College for Women,

Amaravathipudur (September 09th, 2012).

• REFRESHER COURSE on Physics on 08.09.2012 at CAS in Crystallography and

Biophysics, University of Madras.

• DBT Sponsored National Conference on “High Throughput Technologies in

Bioinformatics” [HT2B’12] organized by Department of Bioinformatics, Karunya

University, 23rd - 24th August, 2012.

• National Seminar and Workshop on Bioinformatics and Three-Dimensional Structure

and Determination of Biomolecules 27th -28th February, 2012, Dept. of Physics, Ethiraj

College for Women, Chennai (Plenary lecture: High Throughput X-ray Crystallography)

• High Throughput X-Ray Crystallography at International Conference on Recent

Perspectives in Macro Molecular Structures and Functions (ICMSF-2012), 27th -28th

January, 2012, Central Agricultural Research Institute, Port Blair, Andaman &

Nicobar Islands.

• 5th International Symposium on Recent Trends in Macromolecular Structure and

Function ISRTMSF-2012 23rd-25th January, 2012 CAS in Crystallography and

Biophysics, University of Madras, Chennai.

• Refresher Course on Physics on 22nd September, 2011, CAS in Crystallography and

Biophysics, University of Madras, Chennai.

• National Conference on Recent trends in Green Synthesis – 2011, 05th - 06th August

2011, Department of Industrial Chemistry, School of Chemistry, Alagappa

University, Karaikudi.

• Symposium on Trends in Bioinformatics and Molecular Modeling July 30th - August 1st

2010, University of Madras.

• High throughput X-Ray Crystallography, Department of Bioinformatics, Bharathidasan

University, Trichy, 18.12.2010

• Fundamentals of Bioinformatics, Thiagarajar College Madurai, 18.10.2010

• High throughput X-ray Crystallography, Dept. of Biophysics, Madras University, 04.08.2010

• Current status of the Spring-8 BL12B2 PX station The Annual meeting 2009 and

general Assembly by CrsJ, Nishinomiya, December 5th -6th, 2009, Japan

• Beamline Automation and High Throughput Data Collection at SPring-8 Structural

Biology Beamline BL12B2. Fifteenth Users Meeting & Workshop, October 14th -16th ,

2009, NSRRC, Hsinchu, Taiwan.

• Beamline Automation and High Throughput Data Collection at SPring-8 Structural

Biology Beamline BL12B2. SRI 2009, September 27th to 2nd October, Australia.

• Structure determination on three asthmatic drug targets by Synchrotron powder

diffraction. 25th ECM, August 16th -21st , 2009, Istanbul.

• Crystal structures of Thymidylate Kinase from Sulfolobus tokodaii and Aquifex aeolicus.

ISMBECCB, June 27th -July 2nd , 2009, Stockholm

• Upgrade of the SPring-8 BL12B2 Protein Crystallography (PX) station The 22nd

Symposium of the JSSR, Jan.9-12 2009. Japan.

• Installation of High Throughput Protein Crystallography Data Collection at SPring-8

BL12B2. Fourteenth Users Meeting & Workshop, October 8th -9th, 2008, NSRRC,

Hsinchu, Taiwan.

• Installation of High Throughput Protein Crystallography Data Collection at SPring-8

BL12B2. XXI Congress of the IUCr, August 23rd -31st 2008, Osaka, Japan.

• International Symposium on Recent Trends in Macromolecular Structure and Function,

January 7th -11th 2008, Chennai, India.

• The Second International Symposium on Diffraction Structural Biology 2007,

September 10th -13th 2007, Nagoya, Japan

• American Crystallographic Association 2006 Annual Meeting, 22nd -27th, July 2006,

Honolulu, Hawaii, USA.

• 20th IUBMB International Congress of Biochemistry and Molecular Biology and 11th

FAOBMB Congress. 18th -23rd, June 2006, Kyoto, Japan.

• XX IUCr Congress and General Assembly 23rd -31st August 2005, at Florence, Italy.

• International Conference on Structural Genomics (November 16th -23rd , 2004),

Washington, USA.

• International Symposium on “Current Trends in Drug Discovery Research”

(February 17th -20th, 2004), Lucknow.

• Discussion Meeting on Structural Biology and Symposium on Biophysics, Jan 21st -

• 23th, 2002, University of Madras, Chennai, India.

• International Symposium on Crystallography and Bioinformatics in Structural Biology,

November 22nd -25th, 2001, Bangalore, India.

• AsCA 4th conference of the Asian Crystallography Association. India, November, 18

21th, 2001, Bangalore, India.

• XXX National Seminar on Crystallography June 28th-30th, 2000, Sri Venkateswara

University, Tirupati, India.

• XVIIIth IUCr Congress and General Assembly 4th -13th August 1999. Glasgow, Scotland, UK.

• XXIX National Seminar on Crystallography, December 1998, Chennai, India.

• AscA'98 3rd conference of the Asian Crystallography Association. October 13th-15th,

1998, Malaysia.

• XVIII National Seminar on Crystallography, September 1997, Kottayam, India.

• XXVII National Seminar on Crystallography, January 1996, Varanasi, India.

• Centenary Seminar on Applied X-rays, 18th-19th December 1995. Madurai.

• XXVI National Seminar on Crystallography, 16th-18th. January 1995. Mysore, India.

Signature J. Jeyakanthan

profilejjeyakanthan.bioinfoau.org/[email protected] research forebearance...

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