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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health [email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health Fundamentals of Hypothesis Testing: One-Sample Tests Prof. dr. Siswanto Agus Wilopo, M.Sc., Sc.D. Department of Biostatics, Epidemiology and Population Health Faculty of Medicine Universitas Gadjah Mada 9/22/2017 Biostatistics I: 2017-18 1

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Page 1: Fundamentals of Hypothesis Testing: One-Sample Testsweb90.opencloud.dssdi.ugm.ac.id/.../10/Lecture-7.pdf · 1 • Is the opposite of the null hypothesis –e.g., The average number

[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population [email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Fundamentals of Hypothesis

Testing: One-Sample Tests

Prof. dr. Siswanto Agus Wilopo, M.Sc., Sc.D.Department of Biostatics, Epidemiology

and Population HealthFaculty of Medicine

Universitas Gadjah Mada

9/22/2017Biostatistics I: 2017-18

1

Page 2: Fundamentals of Hypothesis Testing: One-Sample Testsweb90.opencloud.dssdi.ugm.ac.id/.../10/Lecture-7.pdf · 1 • Is the opposite of the null hypothesis –e.g., The average number

[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Learning Objectives

In this lecture, you learn:

• The basic principles of hypothesis testing

• How to use hypothesis testing to test a mean or proportion

• The assumptions of each hypothesis-testing procedure, how to evaluate them, and the consequences if they are seriously violated

• How to avoid the pitfalls involved in hypothesis testing

• The ethical issues involved in hypothesis testing

Biostatistics I: 2017-189/22/2017 2

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

What is a Hypothesis?

• A hypothesis is a claim (assumption) about a population parameter:

– population mean

– population proportion

Biostatistics I: 2017-18

Example: The mean of systolic blood pressure

among adults of this city is μ = 120 mmHg

Example: The proportion of adults in this city

with hypertension is π = 0.118

9/22/2017 3

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

The Null Hypothesis, H0

• States the claim or assertion to be

tested

Example: The average number of children in NTT

woman is equal to three ( )

• Is always about a population

parameter, not about a sample statistic

3μ:H0

3μ:H0 3X:H0

9/22/2017 Biostatistics I: 2017-18 4

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

The Null Hypothesis, H0

• Begin with the assumption that the null

hypothesis is true

– Similar to the notion of innocent untilproven guilty

• Refers to the status quo

• Always contains “=” , “≤” or “” sign

• May or may not be rejected

Biostatistics I: 2017-18

(continued)

9/22/2017 5

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

The Alternative Hypothesis, H1

• Is the opposite of the null hypothesis– e.g., The average number of children in NTT

woman is not equal to 3 ( H1: μ ≠ 3 )

• Challenges the status quo

• Contains the “=” , “≤” or “” sign

• May or may not be proven

• Is generally the hypothesis that the researcher is trying to prove

Biostatistics I: 2017-189/22/2017 6

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Biostatistics I: 2017-18

Population

Claim: the

population

mean age is 50.

(Null Hypothesis:

REJECT

Suppose

the samplemean age

is 20: X = 20

SampleNull Hypothesis

20 likely if μ = 50?Is

Hypothesis Testing Process

If not likely,

Now select a

random sample

H0: μ = 50 )

X

9/22/2017 7

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Reason for Rejecting H0

Biostatistics I: 2017-18

Sampling Distribution of X

μ = 50If H0 is true

If it is unlikely that

we would get a

sample mean of

this value ...

... then we

reject the null

hypothesis that

μ = 50.

20

... if in fact this were

the population mean…

X

9/22/2017 8

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Level of Significance,

• Defines the unlikely values of the sample statistic if the null hypothesis is true

– Defines rejection region of the sampling distribution

• Is designated by , (level of significance)

– Typical values are 0.01, 0.05, or 0.10

• Is selected by the researcher at the beginning

• Provides the critical value(s) of the test

Biostatistics I: 2017-189/22/2017 9

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Level of Significance and the Rejection Region

Biostatistics I: 2017-18

H0: μ ≥ 3

H1: μ < 3

0

H0: μ ≤ 3

H1: μ > 3

Representscritical value

Lower-tail test

Level of significance =

0Upper-tail test

Two-tail test

Rejection

region is

shaded

/2

0

/2H0: μ = 3

H1: μ ≠ 3

9/22/2017 10

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Errors in Making Decisions

• Type I Error

– Reject a true null hypothesis

– Considered a serious type of error

The probability of Type I Error is

• Called level of significance of the test

• Set by the researcher in advance

Biostatistics I: 2017-18

The probability of Type I Error is

9/22/2017 11

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Errors in Making Decisions

• Type II Error

– Fail to reject a false null hypothesis

The probability of Type II Error is β

Biostatistics I: 2017-18

The probability of Type II Error is β

(continued)

9/22/2017 12

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Outcomes and Probabilities

Biostatistics I: 2017-18

Actual situation

Decision

Do Not

Reject

H0

No error

(1 - )

Type II Error

( β )

Reject

H0

Type I Error

( )

Possible Hypothesis Test Outcomes

H0 FalseH0 True

Key:

Outcome

(Probability) No Error

( 1 - β )

9/22/2017 13

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Type I & II Error Relationship

Biostatistics I: 2017-18

Type I and Type II errors cannot happen atthe same time

Type I error can only occur if H0 is true

Type II error can only occur if H0 is false

If Type I error probability ( ) , then

Type II error probability ( β )

9/22/2017 14

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Factors Affecting Type II Error

• All else equal,

– β when the difference between

hypothesized parameter and its true value

– β when

– β when σ

– β when n

Biostatistics I: 2017-189/22/2017 15

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Hypothesis Tests for the Mean

Biostatistics I: 2017-18

Known Unknown

Hypothesis

Tests for

(Z test) (t test)

9/22/2017 16

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Z Test of Hypothesis for the Mean (σKnown)

• Convert sample statistic ( ) to a Z test

statistic

Biostatistics I: 2017-18

X

The test statistic is:

n

σ

μXZ

σ Known σ Unknown

Hypothesis

Tests for

Known Unknown(Z test) (t test)

9/22/2017 17

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Critical Value Approach to Testing

• For a two-tail test for the mean, σ known:

• Convert sample statistic ( ) to test statistic (Z statistic )

• Determine the critical Z values for a specified level of significance from a table or computer

• Decision Rule: If the test statistic falls in the rejection region, reject H0 ; otherwise do not reject H0

Biostatistics I: 2017-18

X

9/22/2017 18

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Two-Tail Tests

Biostatistics I: 2017-18

Do not reject H0 Reject H0Reject H0

There are two

cutoff values

(critical values),

defining the

regions of

rejection

/2

-Z 0

H0: μ = 3

H1: μ 3

+Z

/2

Lower

critical

value

Upper

critical

value

3

Z

X

9/22/2017 19

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

6 Steps in Hypothesis Testing

1. State the null hypothesis, H0 and the alternative hypothesis, H1

2. Choose the level of significance, , and the sample size, n

3. Determine the appropriate test statistic and sampling distribution

4. Determine the critical values that divide the rejection and nonrejection regions

Biostatistics I: 2017-189/22/2017 20

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

6 Steps in Hypothesis Testing

5. Collect data and compute the value of the test statistic

6. Make the statistical decision and state the managerial conclusion.

If the test statistic falls into the non-rejection region, do not reject the null hypothesis H0.

If the test statistic falls into the rejection region, reject the null hypothesis.

Express the managerial conclusion in the context of the problem

Biostatistics I: 2017-18

(continued)

9/22/2017 21

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Hypothesis Testing Example

Biostatistics I: 2017-18

Test the claim that the true mean of

children in NTT woman is # equal to 3.(Assume σ = 0.8)

1. State the appropriate null and alternative hypotheses

H0: μ = 3 H1: μ ≠ 3 (This is a two-tail test)

2. Specify the desired level of significance and the

sample size

Suppose that = 0.05 and n = 100 are chosen for

this test

9/22/2017 22

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Hypothesis Testing Example

Biostatistics I: 2017-18

2.0.08

.16

100

0.8

32.84

n

σ

μXZ

3. Determine the appropriate technique

σ is known so this is a Z test.

4. Determine the critical values

For = 0.05 the critical Z values are ±1.96

5. Collect the data and compute the test statistic

Suppose the sample results are

n = 100, X = 2.84 (σ = 0.8 is assumed known)

So the test statistic is:

(continued)

9/22/2017 23

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Hypothesis Testing Example

6. Is the test statistic in the rejection region?

Biostatistics I: 2017-18

Reject H0 Do not reject H0

= 0.05/2

-Z= -1.96 0

Reject H0 if

Z < -1.96 or

Z > 1.96;

otherwise

do not

reject H0

(continued)

= 0.05/2

Reject H0

+Z= +1.96

Here, Z = -2.0 < -1.96, so the

test statistic is in the rejection

region9/22/2017 24

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Hypothesis Testing Example

6(continued). Reach a decision and interpret the result

Biostatistics I: 2017-18

-2.0

Since Z = -2.0 < -1.96, we reject the null hypothesis and

conclude that there is sufficient evidence that the mean

number of children of NTT woman is not equal to 3

(continued)

Reject H0 Do not reject H0

= 0.05/2

-Z= -1.96 0

= 0.05/2

Reject H0

+Z= +1.96

9/22/2017 25

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

p-Value Approach to Testing

• p-value: Probability of obtaining a

test statistic more extreme ( ≤ or )

than the observed sample value

given H0 is true

– Also called observed level of significance

– Smallest value of for which H0 can be rejected

Biostatistics I: 2017-189/22/2017 26

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

p-Value Approach to Testing

Biostatistics I: 2017-18

X(continued)

• Convert Sample Statistic (e.g., ) to

Test Statistic (e.g., Z statistic )

• Obtain the p-value from a table or

computer

• Compare the p-value with

– If p-value < , reject H0

– If p-value , do not reject H0

9/22/2017 27

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

p-Value Example

• Example: How likely is it to see a sample mean

of 2.84 (or something further from the mean, in

either direction) if the true mean is = 3.0?

Biostatistics I: 2017-18

0.0228

/2 = 0.025

-1.96 0

-2.0

0.02282.0)P(Z

0.02282.0)P(Z

Z1.96

2.0

X = 2.84 is translated

to a Z score of Z = -2.0

p-value

= 0.0228 + 0.0228 = 0.0456

0.0228

/2 = 0.025

9/22/2017 28

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

p-Value Example

• Compare the p-value with

– If p-value < , reject H0

– If p-value , do not reject H0

Biostatistics I: 2017-18

Here: p-value = 0.0456 = 0.05

Since 0.0456 < 0.05,

we reject the null

hypothesis

(continued)

0.0228

/2 = 0.025

-1.96 0

-2.0

Z1.96

2.0

0.0228

/2 = 0.025

9/22/2017 29

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Biostatistics I: 2017-18

Connection to Confidence Intervals

For X = 2.84, σ = 0.8 and n = 100, the 95%

confidence interval is:

2.6832 ≤ μ ≤ 2.9968

Since this interval does not contain the hypothesized

mean (3.0), we reject the null hypothesis at = 0.05

100

0.8 (1.96) 2.84 to

100

0.8 (1.96) - 2.84

9/22/2017 30

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

One-Tail Tests

• In many cases, the alternative hypothesis focuses on a particular direction

Biostatistics I: 2017-18

H0: μ ≥ 3

H1: μ < 3

H0: μ ≤ 3

H1: μ > 3

This is a lower-tail test since the

alternative hypothesis is focused on

the lower tail below the mean of 3

This is an upper-tail test since the

alternative hypothesis is focused on

the upper tail above the mean of 3

9/22/2017 31

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Lower-Tail Tests

Biostatistics I: 2017-18

Reject H0 Do not reject H0

There is only one

critical value, since

the rejection area is

in only one tail

-Z 0

μ

H0: μ ≥ 3

H1: μ < 3

Z

X

Critical value

9/22/2017 32

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Upper-Tail Tests

Biostatistics I: 2017-18

Reject H0Do not reject H0

Zα0

μ

H0: μ ≤ 3

H1: μ > 3 There is only one

critical value, since

the rejection area is

in only one tail

Critical value

Z

X_

9/22/2017 33

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Example: Upper-Tail Z Test for Mean ( Known)

An investigator thinks that annual health expenditure have increased, and now average over $52 per year. The investigator wishes to test this claim. (Assume = 10 is known)

Biostatistics I: 2017-18

H0: μ ≤ 52 the average is not over $52 per month

H1: μ > 52 the average is greater than $52 per year(i.e., sufficient evidence exists to support the invitagotor’s claim)

Form hypothesis test:

9/22/2017 34

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

• Suppose that = 0.10 is chosen for this test

Find the rejection region:

Biostatistics I: 2017-18

Reject H0Do not reject H0

= 0.10

1.280

Reject H0

Reject H0 if Z > 1.28

Example: Find Rejection Region(continued)

9/22/2017 35

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Review:One-Tail Critical Value

Biostatistics I: 2017-18

Z .07 .09

1.1 .8790 .8810 .8830

1.2 .8980 .9015

1.3 .9147 .9162 .9177z 0 1.28

.08

Standardized Normal

Distribution Table (Portion)What is Z given = 0.10?

= 0.10

Critical Value

= 1.28

0.90

.8997

0.10

0.90

9/22/2017 36

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Example: Test Statistic

Obtain sample and compute the test statistic

Suppose a sample is taken with the following results: n = 64, X = 53.1 (=10 was assumed known)

– Then the test statistic is:

Biostatistics I: 2017-18

0.88

64

10

5253.1

n

σ

μXZ

(continued)

9/22/2017 37

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Example: Decision

Reach a decision and interpret the result:

Biostatistics I: 2017-18

Reject H0Do not reject H0

= 0.10

1.280

Reject H0

Do not reject H0 since Z = 0.88 ≤ 1.28

i.e.: there is not sufficient evidence that themean bill is over $52

Z = 0.88

(continued)

9/22/2017 38

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

p -Value Solution

Calculate the p-value and compare to (assuming that μ = 52.0)

Biostatistics I: 2017-18

Reject H0

= 0.10

Do not reject H0 1.28

0

Reject H0

Z = 0.88

(continued)

0.1894

0.810610.88)P(Z

6410/

52.053.1ZP

53.1)XP(

p-value = 0.1894

Do not reject H0 since p-value = 0.1894 > = 0.109/22/2017 39

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t Test of Hypothesis for the Mean (σUnknown)

• Convert sample statistic ( ) to a t test

statistic

Biostatistics I: 2017-18

X

The test statistic is:

n

S

μXt 1-n

Hypothesis

Tests for

σ Known σ Unknown Known Unknown(Z test) (t test)

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Example: Two-Tail Test( Unknown)

The average height of male in Indonesia is said to be 168 cm. A random sample of 25 male resulted in

X = 172.50 cm and

S = 15.40 cm.

Test at the = 0.05 level.(Assume the population distribution is normal)

Biostatistics I: 2017-18

H0: μ = 168

H1: μ 168

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Example Solution: Two-Tail Test

• = 0.05

• n = 25

• is unknown, so

use a t statistic

• Critical Value:

t24 = ± 2.0639

Biostatistics I: 2017-18

Do not reject H0: not sufficient evidence that

true mean height is different than 168 cm

Reject H0Reject H0

/2=.025

-t n-1,α/2

Do not reject H0

0

/2=.025

-2.0639 2.0639

1.46

25

15.40

168172.50

n

S

μXt 1n

1.46

H0: μ = 168

H1: μ 168

t n-1,α/2

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Biostatistics I: 2017-18

Connection to Confidence Intervals

For X = 172.5, S = 15.40 and n = 25, the 95%

confidence interval is:

172.5 - (2.0639) 15.4/ 25 to 172.5 + (2.0639) 15.4/ 25

166.14 ≤ μ ≤ 178.86

Since this interval contains the Hypothesized mean (168),

we do not reject the null hypothesis at = 0.05

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Hypothesis Tests for Proportions

• Involves categorical variables

• Two possible outcomes

– “Success” (possesses a certain characteristic)

– “Failure” (does not possesses that characteristic)

• Fraction or proportion of the population

in the “success” category is denoted by

π

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Proportions

• Sample proportion in the success category is denoted by p

• When both nπ and n(1-π) are at least 5, pcan be approximated by a normal distribution with mean and standard deviation

Biostatistics I: 2017-18

sizesample

sampleinsuccessesofnumber

n

Xp

pμ n

)(1σ

p

(continued)

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[email protected] Universitas Gadjah Mada, Faculty of Medicine, Department of Biostatistics, Epidemiology and Population Health

Hypothesis Tests for Proportions

• The sampling distribution of p is approximately normal, so the test statistic is a Z value:

Biostatistics I: 2017-18

n

)(1

pZ

ππ

π

nπ 5

and

n(1-π) 5

Hypothesis

Tests for p

nπ < 5

or

n(1-π) < 5

Not discussed

in this chapter

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Z Test for Proportionin Terms of Number of Successes

• An equivalent

form to the last

slide, but in terms

of the number of

successes, X:

Biostatistics I: 2017-18

)(1n

nXZ

X 5

and

n-X 5

Hypothesis

Tests for X

X < 5

or

n-X < 5

Not discussed

in this chapter

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Example: Z Test for Proportion

A researcher claims

that it receives 8%

responses from its

mailing. To test this

claim, a random

sample of 500 were

surveyed with 25

responses. Test at the

= 0.05 significance

level.

Biostatistics I: 2017-18

Check:

nπ = (500)(.08) = 40

n(1-π) = (500)(.92) = 460

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Z Test for Proportion: Solution

= 0.05

n = 500, p = 0.05

Biostatistics I: 2017-18

Reject H0 at = 0.05

H0: π = 0.08

H1: π 0.08

Critical Values: ± 1.96

Test Statistic:

Decision:

Conclusion:

z0

Reject Reject

.025.025

1.96

-2.47

There is sufficient

evidence to reject the

researcher claim of 8%

response rate.

2.47

500

.08).08(1

.08.05

n

)(1

pZ

-1.96

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p-Value Solution

Calculate the p-value and compare to (For a two-tail test the p-value is always two-tail)

Biostatistics I: 2017-18

Do not reject H0

Reject H0Reject H0

/2 = .025

1.960

Z = -2.47

(continued)

0.01362(0.0068)

2.47)P(Z2.47)P(Z

p-value = 0.0136:

Reject H0 since p-value = 0.0136 < = 0.05

Z = 2.47

-1.96

/2 = .025

0.00680.0068

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Potential Pitfalls and Ethical Considerations

• Use randomly collected data to reduce selection

biases

• Do not use human subjects without informed

consent

• Choose the level of significance, α, and the type of

test (one-tail or two-tail) before data collection

• Do not employ “data snooping” to choose between

one-tail and two-tail test, or to determine the level of

significance

• Do not practice “data cleansing” to hide

observations that do not support a stated hypothesis

• Report all pertinent findings

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Chapter Summary

• Addressed hypothesis testing

methodology

• Performed Z Test for the mean (σ

known)

• Discussed critical value and p–value

approaches to hypothesis testing

• Performed one-tail and two-tail tests

Biostatistics I: 2017-189/22/2017 52

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Chapter Summary

• Performed t test for the mean (σ

unknown)

• Performed Z test for the proportion

• Discussed pitfalls and ethical issues

Biostatistics I: 2017-18

(continued)

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