evolution of the androgen receptor pathway during progression … · the androgen receptor pathway...

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Evolution of the Androgen Receptor Pathway during Progression of Prostate Cancer Peter J.M. Hendriksen, 1,2 Natasja F.J. Dits, 1 Koichi Kokame, 3 Antoine Veldhoven, 1 Wytske M. van Weerden, 1 Chris H. Bangma, 1 Jan Trapman, 2 and Guido Jenster 1 Departments of 1 Urology and 2 Pathology, Josephine Nefkens Institute, Erasmus Medical Center, Rotterdam, the Netherlands and 3 National Cardiovascular Center Research Institute, Osaka, Japan Abstract The present work focused on the potential involvement of selective adaptations of the androgen receptor pathway in the initiation and progression of prostate cancer. We defined the androgen receptor pathway by selecting 200 genes that were androgen responsive in prostate cancer cell lines and/or xenografts. This androgen receptor pathway gene signature was then used for profiling prostate cancer xeno- grafts and patient-derived samples. Approximately half of the androgen receptor pathway genes were up-regulated in well-differentiated prostate cancer compared with normal prostate. Functionally distinct parts of the androgen receptor pathway were specifically down-regulated in high-grade can- cers. Unexpectedly, metastases have down-regulated the vast majority of androgen receptor pathway genes. The signifi- cance of this progressive down-regulation of androgen receptor pathway genes was shown for a few androgen receptor–regulated genes. Lower mRNA expression of HER- PUD1, STK39, DHCR24, and SOCS2 in primary prostate tumors was correlated with a higher incidence of metastases after radical prostatectomy. HERPUD1 mRNA expression predicted the occurrence of metastases almost perfectly. In vitro experiments showed that overexpression of the stress response gene HERPUD1 rapidly induces apoptosis. Based on the func- tions of the genes within the distinct subsets, we propose the following model. Enhanced androgen receptor activity is involved in the early stages of prostate cancer. In well- differentiated prostate cancer, the androgen receptor acti- vates growth-promoting as well as growth-inhibiting and cell differentiation genes resulting in a low growth rate. The progression from low-grade to high-grade prostate carcinoma and metastases is mediated by a selective down-regulation of the androgen receptor target genes that inhibit prolifera- tion, induce differentiation, or mediate apoptosis. (Cancer Res 2006; 66(10): 5012-20) Introduction The androgen receptor plays a pivotal role in the growth and survival of both normal prostate epithelium and prostate carcinoma. Both normal and malignant prostate tissues regress on androgen deprivation, although this effect on prostate carcinoma is only temporary (1). The function of the androgen receptor, however, markedly differs between the normal prostate and prostate carcinoma. Whereas the androgen receptor is a key regulator for prostatic function and survival in the normal prostate epithelium, the androgen receptor has been converted into an inducer of uncontrolled cell growth in prostate carcinoma (1, 2). The recent identification of frequent chromosomal rearrangement in prostate cancer that results in fusion of TMPRSS2 with ETS transcription factor genes explains this conversion (3). The ETS family members ERG and ETV1 are normally not or lowly expressed in prostate tissues. Fusion of these genes to the strong androgen-regulated TMPRSS2 promoter results in androgen- induced expression of these proto-oncogenes, which likely cause prostate tumorigenesis. That enhanced androgen receptor activity of itself is unlikely to be sufficient for causing aggressive growth could already be deduced from our knowledge on androgen receptor function in the normal prostate. In vitro experiments indicated that androgens induce differentiation and thereby inhibit growth of prostate epi- thelial cells (4, 5). In a transgenic mouse model, overexpression of the wild-type (WT) androgen receptor in prostatic epithelial cells resulted in intraepithelial neoplasia but not in carcinomas (6). The growth-stimulating effect of androgens on normal epithelial cells is at least partly mediated by the prostatic stromal cells, which produce and secrete growth factors, the andromedins, in response to androgen exposure (1, 2, 7). During prostatic carcinogenesis, the balance between the differentiation- and proliferation-inducing functions of the androgen receptor might be disturbed. Such a transition would likely be reflected by changes within the andro- gen receptor pathway genes. Therefore, we studied the expression levels of androgen receptor pathway genes during progression of prostate carcinoma. Many gene expression profiling studies have been published for prostate carcinoma as well as for other types of cancers. This has led to the identification of gene sets specific for localized prostate carcinoma and metastases or related to the occurrence of relapse after radical prostatectomy (8–14). The functions of the genes within these sets are very diverse. Although these gene sets might have diag- nostic and prognostic prospects, their effect on our understanding of the biological mechanisms involved in cancer progression is limited. The use of ‘‘functional gene sets,’’ such as target genes from a transcription factor, might be a more valuable tool to enhance this understanding. This was tested in the present study using an androgen receptor pathway gene signature. To identify androgen receptor pathway genes, expression mi- croarray analyses were done on the prostate carcinoma cell line LNCaP and on a panel of 13 prostate carcinoma xenografts. In total, 200 androgen receptor pathway genes were identified. To test whether the androgen receptor pathway is changed during prostate carcinoma progression, the expression of these 200 genes Note: Supplementary data for this article are available at Cancer Research Online (http://cancerres.aacrjournals.org/). Requests for reprints: Guido Jenster, Department of Urology, Josephine Nefkens Institute Be362a, Erasmus Medical Center, P.O. Box 3000 DR Rotterdam, the Netherlands. Phone: 31-10-408-7672; Fax: 31-10-408-9386; E-mail: g.jenster@ erasmusmc.nl. I2006 American Association for Cancer Research. doi:10.1158/0008-5472.CAN-05-3082 Cancer Res 2006; 66: (10). May 15, 2006 5012 www.aacrjournals.org Research Article Research. on March 2, 2020. © 2006 American Association for Cancer cancerres.aacrjournals.org Downloaded from

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Page 1: Evolution of the Androgen Receptor Pathway during Progression … · the androgen receptor pathway by selecting 200 genes that were androgen responsive in prostate cancer cell lines

Evolution of the Androgen Receptor Pathway during

Progression of Prostate Cancer

Peter J.M. Hendriksen,1,2Natasja F.J. Dits,

1Koichi Kokame,

3Antoine Veldhoven,

1

Wytske M. van Weerden,1Chris H. Bangma,

1Jan Trapman,

2and Guido Jenster

1

Departments of 1Urology and 2Pathology, Josephine Nefkens Institute, Erasmus Medical Center, Rotterdam,the Netherlands and 3National Cardiovascular Center Research Institute, Osaka, Japan

Abstract

The present work focused on the potential involvement ofselective adaptations of the androgen receptor pathway inthe initiation and progression of prostate cancer. We definedthe androgen receptor pathway by selecting 200 genesthat were androgen responsive in prostate cancer cell linesand/or xenografts. This androgen receptor pathway genesignature was then used for profiling prostate cancer xeno-grafts and patient-derived samples. Approximately half ofthe androgen receptor pathway genes were up-regulated inwell-differentiated prostate cancer compared with normalprostate. Functionally distinct parts of the androgen receptorpathway were specifically down-regulated in high-grade can-cers. Unexpectedly, metastases have down-regulated the vastmajority of androgen receptor pathway genes. The signifi-cance of this progressive down-regulation of androgenreceptor pathway genes was shown for a few androgenreceptor–regulated genes. Lower mRNA expression of HER-PUD1, STK39, DHCR24, and SOCS2 in primary prostate tumorswas correlated with a higher incidence of metastases afterradical prostatectomy. HERPUD1 mRNA expression predictedthe occurrence of metastases almost perfectly. In vitroexperiments showed that overexpression of the stress responsegene HERPUD1 rapidly induces apoptosis. Based on the func-tions of the genes within the distinct subsets, we proposethe following model. Enhanced androgen receptor activityis involved in the early stages of prostate cancer. In well-differentiated prostate cancer, the androgen receptor acti-vates growth-promoting as well as growth-inhibiting andcell differentiation genes resulting in a low growth rate. Theprogression from low-grade to high-grade prostate carcinomaand metastases is mediated by a selective down-regulationof the androgen receptor target genes that inhibit prolifera-tion, induce differentiation, or mediate apoptosis. (Cancer Res2006; 66(10): 5012-20)

Introduction

The androgen receptor plays a pivotal role in the growth andsurvival of both normal prostate epithelium and prostatecarcinoma. Both normal and malignant prostate tissues regresson androgen deprivation, although this effect on prostate

carcinoma is only temporary (1). The function of the androgenreceptor, however, markedly differs between the normal prostateand prostate carcinoma. Whereas the androgen receptor is a keyregulator for prostatic function and survival in the normal prostateepithelium, the androgen receptor has been converted into aninducer of uncontrolled cell growth in prostate carcinoma (1, 2).The recent identification of frequent chromosomal rearrangementin prostate cancer that results in fusion of TMPRSS2 with ETStranscription factor genes explains this conversion (3). The ETSfamily members ERG and ETV1 are normally not or lowlyexpressed in prostate tissues. Fusion of these genes to the strongandrogen-regulated TMPRSS2 promoter results in androgen-induced expression of these proto-oncogenes, which likely causeprostate tumorigenesis.That enhanced androgen receptor activity of itself is unlikely

to be sufficient for causing aggressive growth could already bededuced from our knowledge on androgen receptor function in thenormal prostate. In vitro experiments indicated that androgensinduce differentiation and thereby inhibit growth of prostate epi-thelial cells (4, 5). In a transgenic mouse model, overexpression ofthe wild-type (WT) androgen receptor in prostatic epithelial cellsresulted in intraepithelial neoplasia but not in carcinomas (6). Thegrowth-stimulating effect of androgens on normal epithelial cellsis at least partly mediated by the prostatic stromal cells, whichproduce and secrete growth factors, the andromedins, in responseto androgen exposure (1, 2, 7). During prostatic carcinogenesis,the balance between the differentiation- and proliferation-inducingfunctions of the androgen receptor might be disturbed. Such atransition would likely be reflected by changes within the andro-gen receptor pathway genes.Therefore, we studied the expression levels of androgen receptor

pathway genes during progression of prostate carcinoma. Manygene expression profiling studies have been published for prostatecarcinoma as well as for other types of cancers. This has led to theidentification of gene sets specific for localized prostate carcinomaand metastases or related to the occurrence of relapse after radicalprostatectomy (8–14). The functions of the genes within thesesets are very diverse. Although these gene sets might have diag-nostic and prognostic prospects, their effect on our understandingof the biological mechanisms involved in cancer progression islimited. The use of ‘‘functional gene sets,’’ such as target genes froma transcription factor, might be a more valuable tool to enhancethis understanding. This was tested in the present study using anandrogen receptor pathway gene signature.To identify androgen receptor pathway genes, expression mi-

croarray analyses were done on the prostate carcinoma cell lineLNCaP and on a panel of 13 prostate carcinoma xenografts. Intotal, 200 androgen receptor pathway genes were identified. Totest whether the androgen receptor pathway is changed duringprostate carcinoma progression, the expression of these 200 genes

Note: Supplementary data for this article are available at Cancer Research Online(http://cancerres.aacrjournals.org/).

Requests for reprints: Guido Jenster, Department of Urology, Josephine NefkensInstitute Be362a, Erasmus Medical Center, P.O. Box 3000 DR Rotterdam,the Netherlands. Phone: 31-10-408-7672; Fax: 31-10-408-9386; E-mail: [email protected].

I2006 American Association for Cancer Research.doi:10.1158/0008-5472.CAN-05-3082

Cancer Res 2006; 66: (10). May 15, 2006 5012 www.aacrjournals.org

Research Article

Research. on March 2, 2020. © 2006 American Association for Cancercancerres.aacrjournals.org Downloaded from

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was assessed in both xenografts and clinical prostate carcinomaspecimens. The results indicate that prostate carcinomas down-regulate part of the androgen receptor pathway before acquiringthe ability to metastasize. This finding was further supported byquantitative reverse transcription-PCR (RT-PCR) on a selection ofgenes on an independent set of prostate carcinoma samples.

Materials and Methods

Prostate carcinoma xenografts, cell lines, and patient-derivedtissues. Thirteen prostate carcinoma xenografts have been established at

our laboratory (15–17), and their main characteristics are given in Table 1.

Additional information about the xenografts is provided in Supplementary

Data. Xenografts were collected either from intact male mice or 7 to 14 daysafter castration. Tissues were frozen at �80jC. The xenograft PC329 hasbeen lost, and tissues taken from castrated mice are not available anymore.

The prostate carcinoma cell line LNCaP has been well described (18). TheLNCaP cell line was maintained in RPMI 1640 with 5% FCS and penicillin/

streptomycin (Invitrogen, Merelbeke, Belgium). Before R1881 treatment,

cells were androgen deprived for 72 hours in medium containing 5%

dextran-filtered, charcoal-stripped FCS with a medium replacement after36 hours. After androgen deprivation, the medium was supplemented for

2, 4, 6, or 8 hours with 1 nmol/L R1881 or ethanol vehicle.

Normal and tumor specimens from patients used for quantitative real-

time RT-PCR analysis were obtained from the frozen tissue bank of theErasmus Medical Center (Rotterdam, the Netherlands). The specimens were

collected between 1984 and 2001. Additional information about these

specimens is provided in Supplementary Data.RNA amplification, cDNA labeling, and cDNA microarray hybrid-

izations. Total RNA (3 Ag) was used for a T7-based linear mRNA

amplification protocol (19). Amplified RNA (2 Ag) was used to produce Cy3-or Cy5-labeled cDNA. The cDNA microarrays were manufactured at theCentral Microarray Facility at the Netherlands Cancer Institute (Amster-

dam, the Netherlands) and contained >18,000 features that have been

selected from the Research Genetics Human Sequence Verified Library

(Invitrogen). Xenograft cDNA was labeled with Cy3 and cohybridizedwith Cy5-labeled cDNA prepared from RNA extracted from 13 cell lines,

including the 2 prostate carcinoma cell lines Du145 and LNCaP. Four

microarrays were used per xenograft on tissue samples collected in separate

experiments. Two samples were taken from intact male mice and anothertwo after castration.

The normalization and flagging procedure is provided in Supplementary

Data.

The programs Cluster and Treeview were used for hierarchical cluster-ing (20). Comparisons with other microarray databases were done using

Sequence Retrieval System 7 (Lion Bioscience AG, Heidelberg, Germany)

as published recently (21).

Quantitative real-time RT-PCR analysis. Quantitative real-time RT-PCR analysis was done with a ABI Prism 7700 Sequence Detection System

using AmpliTaq Gold according to the manufacturer’s specifications

(Applied Biosystems, Foster City, CA). The probes and primers werevalidated with Taqman Gene Expression Assays (Applied Biosystems). The

assay identification numbers and PCR settings are given in Supplementary

Data. The amount of target gene expressed was normalized to an endo-

genous reference and relative to a calibrator. The endogenous referencewas glyceraldehyde-3-phosphate dehydrogenase; a mixture of cDNAs of the

prostate carcinoma xenografts was used as the calibrator.

Criteria for up-regulation and down-regulation in the microarrayanalyses and statistics. For the LNCaP time series, spots were consideredto be up-regulated or down-regulated by R1881 when both dye swaps gave a

ratio >1.62 (2 log 0.7) for at least one time point. For the xenografts, spots

were considered to be up-regulated or down-regulated by castration whenthe average ratios of two experiments between the intact and castrated

mice were >2 (2 log 1). Additionally, both individual comparisons between

xenografts grown on an intact mouse versus castrated mouse had to yield a

ratio >1.62 (2 log 0.7). The significant analysis of microarrays method (SAM;version 1.21; ref. 22) was used to detect significantly differentially expressed

spots between normal prostate and prostate carcinoma samples of patients.

m2 analyses were used for comparisons of proportions as indicated in

Results. The significance of overlap between the recurrence-associated geneset published by Henshall et al. (14) and our androgen receptor pathway

genes was determined by Venn Mapper (23).

Box plots, Mann-Whitney U test, Kaplan-Meier test, log-rank test, andCox regression analyses on quantitative real-time RT-PCR results were done

using SPSS11 software (Chicago, IL). Ps < 0.05 were considered significant.

HERPUD1 overexpression. LNCaP and the liver cancer cell line Hep3Bwere transfected with HERPUD1 constructs using Fugene (Roche,Mannheim, Germany) according to the manufacturer’s specifications. The

HERPUD1 expression constructs are described in Supplementary Data.

HERPUD1-transfected cells were detected with either anti-HERPUD1 (24) or

FITC-labeled anti-MYC-Tag (Invitrogen). A rabbit anti-caspase-3 active wasobtained from R&D Systems (Minneapolis, MN). Nuclei of the cells were

counterstained with 0.5 Ag/mL Hoechst 33342 (Invitrogen). The terminal

deoxynucleotidyl transferase–mediated dUTP nick end labeling (TUNEL)

reaction was done on pDsRed2-mHERPf transiently transfected cells usingthe DeadEnd Fluorometric TUNEL kit (Promega, Madison, WI). To

determine the proportion of apoptotic cells, at least 100 transfected cells

per treatment were counted. The transfection experiments were done intriplicate.

Results

Using expression microarray analyses, we followed two strategiesto identify androgen receptor pathway genes. First, LNCaP cellswere treated with R1881 to detect genes that were up-regulatedwithin 8 hours by androgen. Secondly, we assessed which geneswere down-regulated by androgen deprivation in androgenreceptor–expressing prostate carcinoma xenografts.R1881-induced genes in LNCaP. LNCaP cells were treated

with R1881 for short times (2, 4, 6, and 8 hours) to enrich forgenes directly regulated by the androgen receptor. RNA from

Table 1. Panel of prostate cancer xenografts

Tumor model Androgen dependence AR status* Origin

PC82 Androgen dependent AR+ Prostate

PC295 Androgen dependent AR+ Lymph nodePC310 Androgen dependent AR+ Prostate

PC329 Androgen dependent AR+ Prostate

PC346 Androgen responsive AR+ TURP

PC346B Androgen independent AR+ TURPPC346I Androgen independent AR+ TURP

PC346BI Androgen independent AR+ TURP

PC374 Androgen independent AR+ SkinPC133 Androgen independent AR� Bone

PC135 Androgen independent AR� Prostate

PC324c

Androgen independent AR� TURP

PC339 Androgen independent AR� TURP

Abbreviations: AR, androgen receptor; TURP, transurethral resection

of the prostate.

*Xenografts are designated as AR+ when the androgen receptor isdetectable by immunoblotting and the xenograft expresses prostate-

specific antigen.cPC324 shows some androgen receptor expression but does not

express prostate-specific antigen. Although no mutations in theandrogen receptor have been detected, PC324 is considered to have a

nonfunctional androgen receptor pathway.

Androgen Receptor Pathway in Prostate Cancer

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R1881-treated and control cells were compared directly byhybridization to the same microarray. This was done in duplicatewith reversed Cy dye labeling. Spots were considered to be up-regulated or down-regulated by R1881 when both dye swaps gave aratio >1.62 (2 log 0.7) for at least one time point. One hundredthirty-six up-regulated genes (represented by 163 spots) and 60down-regulated genes (represented by 60 spots) were detected(Supplementary Fig. S1; Supplementary Table S1).Genes affected by castration in prostate carcinoma xeno-

grafts. We assessed the expression profiles of 12 xenograftscollected either from intact male mice or 7 to 14 days aftercastration. Eight xenografts have functional androgen receptorexpression. Three of these xenografts depend on androgens forgrowth, whereas four xenografts grow androgen independently(Table 1; see Materials and Methods). One xenograft (PC346) ishormone responsive. It shows reduced albeit continuous growthafter castration, which is stimulated by administration ofandrogens. Four other xenografts lack expression of a functionalandrogen receptor and grow independently of androgens.We did two castration experiments per xenograft yielding two

samples taken from intact male mice and another two aftercastration. Based on the selection criteria given in Materials andMethods, 293 spots were up-regulated or down-regulated bycastration in at least 1 of the 12 xenografts. A hierarchicalclustering of these 293 spots showed the overlap in castration-affected genes among the xenografts (Fig. 1A). A high number ofgenes were up-regulated or down-regulated in the androgen-dependent and hormone-responsive xenografts. Few genes wereaffected by castration in the androgen receptor–expressing,androgen-independent xenografts. As expected, very few geneswere affected by castration in the xenografts lacking androgenreceptor expression. Another observation is that a subset of thegenes are up-regulated or down-regulated in the majority ofandrogen receptor–expressing xenografts, whereas other genes arecastration responsive in only one or two xenografts. Evidently,xenograft-specific androgen receptor pathway genes exist inaddition to common androgen receptor pathway genes.Because androgen-dependent xenografts regress after androgen

deprivation, castration was expected to affect both cell cycle–related and androgen-regulated genes. We tested this assumptionby selecting all spots down-regulated by castration in at least oneandrogen-dependent xenograft (n = 132; Fig. 1A) and clusteredthese spots based on expression levels in the xenografts (Fig. 1B).The clustering discriminated two groups of genes. The genes ofgroup I (n = 65; 71 spots) showed highest expression in theandrogen-dependent xenografts and also, for a part, in androgenreceptor–expressing, androgen-independent xenografts. In con-trast, the genes of group II (n = 59; 61 spots) showed low expressionlevels in androgen-dependent xenografts compared with all others.The two groups clearly differed in proportion of spots that were up-regulated by R1881 in LNCaP: 19 from 71 in group I and 4 from 61in group II (P = 0.002, m2 analysis). To acquire more insight in thefunctions of these two groups of genes, we made use of a data set ofgenes that are differentially expressed during the cell cycle in HeLacells and for which the expression is related to the cell proliferationrate (25). The proportion of cell cycle–related genes was muchhigher within group II [(26 of 59 genes (44%)] than within group I[4 of 65 genes (6%); P = 10�6, m2 analysis; Fig. 1B). The genes ofgroup II therefore very likely represent cell proliferation–relatedgenes that are down-regulated as a second-term effect of castrationdue to the cease of cell division. Their higher expression levels in

Figure 1. Castration-affected genes in xenografts. A, hierarchical clusteringof castration-affected spots. A total of 293 spots were affected by castration inat least one xenograft. The 293 spots were clustered on the differences inexpression levels between intact and castrated mice. Red, down-regulationby castration; green, up-regulation by castration; blue box, a group of 132spots taken for Fig. 2B . B, expression of castration-down-regulated genesin prostate cancer xenografts. Genes were selected on down-regulation bycastration in androgen-dependent (A-dep ) xenografts (blue box in A).Hierarchical clustering on expression in xenografts separated these genesin two groups with high (Group I; n = 71) and low (Group II; n = 61)expression levels in the androgen-dependent xenografts. Right, up-regulation(red ) or down-regulation (green ) of these genes in LNCaP. Red, cellcycle–associated expression based on results published by Whitfield et al.(25). AI, androgen independent; HR, hormone responsive; AR, androgenreceptor.

Cancer Research

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hormone refractory than androgen-dependent xenografts simplyreflect the higher proliferation rate of hormone refractory xeno-grafts. Group I likely represents genes that are more directlyassociated with the androgen pathway. Forty-nine genes of group Iwere not present in the set of 136 R1881 up-regulated genes inLNCaP and included in the androgen receptor pathway signatureset. Fifteen additional genes were selected based on their down-regulation by castration in the androgen receptor–expressing,androgen-independent xenografts of the PC346 group whose growthis unaffected by castration. Combining this gave a set of 200androgen receptor pathway genes. We investigated the expression ofthese genes in xenografts and clinical prostate carcinoma samplesto assess the changes of the androgen receptor pathway duringprostate carcinoma progression. The complete microarray resultshave been submitted to GEO (accession GSE4048).Expression levels of the androgen receptor pathway genes

in prostate carcinoma xenografts. The 200 androgen receptorpathway genes were hierarchically clustered on expression in thexenografts (Fig. 2). As expected, most androgen receptor pathwaygenes were much higher expressed in the androgen-dependentxenografts than in the androgen-independent xenografts lackingandrogen receptor expression. The androgen receptor–expressing,androgen-independent xenografts showed high expression for only afraction of the androgen receptor pathway genes, indicating inter-ference of other pathways/mechanisms that prevent transcriptionalactivation of the majority of these genes by the androgen receptor.Expression levels of the androgen receptor pathway

signature genes in primary prostate carcinoma and metasta-ses in patients. Expression levels of the androgen receptorpathway genes were also evaluated in clinical tumor samples.From the 200 androgen receptor pathway genes, 171 wererepresented in a microarray study on 41 normal prostate speci-mens, 62 primary prostate tumors, and 9 lymph node metastasespublished by Lapointe et al. (13). The prostate carcinoma samplesin this study contained at least 90% tumor tissue. The metastaseshave not been subjected to androgen ablation therapy. The 171androgen receptor pathway genes were sufficient to separatenormal prostate, low-grade prostate carcinoma, and high-gradeprostate carcinoma and metastases in discrete groups byunsupervised hierarchical clustering (Fig. 3A). Data reported byStuart et al. (26) were used to indicate genes for which theexpression levels are associated with the content of either stroma,benign prostatic hyperplasia (BPH), or tumor tissue. Subsets ofandrogen receptor pathway genes were differentially expressedamong the sample groups (Fig. 3A). One subset was higherexpressed in normal prostate (Fig. 3A, green), and nearly all geneswithin this subset were stroma associated. Approximately half ofthe 171 androgen receptor pathway genes were highly expressed inwell-differentiated prostate carcinoma (Fig. 3A, blue and red), andmost of these genes were tumor associated. This implies that theup-regulation of these androgen-up-regulated genes in prostatecarcinoma is due not only to a higher content of epithelial cells butalso to an increased expression in tumor cells compared withnormal epithelial cells. A subset of these genes is down-regulated inhigh-grade prostate carcinoma (Fig. 3A, red). Only a few genesremain relatively highly expressed in metastases (Fig. 3A, orange).The metastases showed also low expression for the well-knownandrogen receptor target gene prostate-specific antigen (KLK3).In marked contrast, the androgen receptor itself is higher expressedin the metastases than in the majority of primary prostatecarcinomas (Fig. 3A).

The expression of the set of 200 androgen receptor pathwaygenes in prostate carcinoma samples was also assessed usingmicroarray data published by Dhanasekaran et al. (8). Again,approximately half of the androgen receptor pathway genes wereup-regulated in primary prostate carcinoma, whereas only fewgenes were relatively high expressed in metastases (SupplementaryFig. S2). All androgen receptor pathway genes that according toSAM were differentially expressed between primary prostatecarcinoma and metastases in Lapointe et al. and/or Dhanasekaranet al. are listed in Supplementary Table S2. Fifty-nine genes weremore highly expressed in primary prostate carcinoma than inmetastases, whereas only two genes were more highly expressed inmetastases (lymph node) than in primary prostate carcinoma.Taken together, this confirms our results with the xenografts thatmain parts of the androgen receptor pathway are down-regulatedin more advanced stages of prostate carcinoma.We verified this analysis with alternative sets of androgen

receptor pathway genes that were selected on up-regulation by

Figure 2. Expression of androgen receptor pathway genes in prostate cancerxenografts. Two hundred genes were selected on up-regulation in LNCaP and/ordown-regulation in androgen receptor–expressing xenografts by castration.Genes (n = 165) with unflagged expression value for at least 50% of thexenografts were hierarchically clustered on expression in xenografts grown onintact mice. Thereafter, expression values of xenografts 1 to 2 weeks aftercastration were added.

Androgen Receptor Pathway in Prostate Cancer

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androgens at later time points in either LNCaP or other androgen-dependent prostate carcinoma cell lines (27). The expressions ofthese gene sets in normal prostate and prostate carcinoma sam-ples were essentially the same as that of our set of 200 genes (seeSupplementary Fig. S3). We then confirmed that the expressionpatterns of the androgen receptor pathway genes did not simplyreflect the general variation in gene expression. Compared with allspots of the Lapointe database, the androgen receptor pathwaygene sets selected on prostate carcinoma cell lines had muchhigher proportions of spots (P < 10�6) that were either (a) up-regulated in primary prostate carcinoma versus normal prostate,(b) down-regulated in lymph node metastases versus primaryprostate carcinoma or normal prostate, or (c) down-regulated inhigh-grade prostate carcinoma versus low-grade prostate carcino-ma (see Supplementary Fig. S4).Down-regulation of androgen receptor pathway genes in

primary prostate carcinoma predicts development of distantmetastases. The down-regulation of the majority of androgen

receptor pathway genes in metastases is intriguing. We addressedthe important issue whether this down-regulation occurs afterdevelopment of the metastasis or that the primary prostatecarcinoma down-regulates the androgen receptor pathway genesbefore acquiring the ability to metastasize. Support for the latterhypothesis was found in the results published previously byHenshall et al. (14) who compared the expression profiles ofprimary prostate carcinomas that did or did not relapse afterradical prostatectomy. For 152 genes represented by 181 spots,relatively low expression in primary prostate carcinoma was foundto be associated with fast relapse (14). Ten of these genes werepresent within our set of 200 androgen-up-regulated genes, whichwas significantly (P < 10�5) more than expected by random chance.Nine of these 10 genes were included in the data set of Lapointe etal. and all up-regulated in the majority of primary prostatecarcinoma compared with normal prostate (Fig. 3B). Interestingly,most of these genes had low expression levels in metastases(Fig. 3B). Taken together, this indicates down-regulation of part

Figure 3. Expression of androgenreceptor pathway genes in prostate cancerspecimens from patients. A, expressiondata were taken from Lapointe et al. (13),which included 171 genes from ourandrogen receptor pathway signature set.A hierarchical clustering was done on bothgenes and samples. Bottom, androgenreceptor and KLK3; right, genessignificantly up-regulated (red ) ordown-regulated (green ) according to SAM.Association with proportion of stroma,BPH, or tumor as published by Stuart et al.(26). PC I, II, and III, three clusteringgroups from primary prostate carcinoma(PC ) samples on 5,153 variably expressedgenes as described by Lapointe et al. (13).PC II and III, relatively high-grade andadvanced-stage tumors. All prostatecarcinoma samples with early recurrenceof metastases after radical prostatectomy(n = 7) clustered within this high-grade PCII and III group. B, selection of nine genesincluded in (A) for which down-regulation inprimary prostate cancer has been reportedto be associated with fast relapse afterradical prostatectomy (14). LN metast,lymph node metastases; normal, normalprostate.

Cancer Research

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of the androgen pathway to be associated with an enhanced metas-tatic potential.To verify these findings, we did quantitative real-time RT-PCR for

five androgen receptor pathway genes on normal prostate andprostate carcinoma specimens obtained at our institute. STK39,SOCS2, HERPUD1, and 24-dehydrocholesterol reductase (DHCR24)or Seladin-1 were selected based on down-regulation in high-gradeprostate carcinomas and lymph node metastases within theLapointe data set. STK39, SOCS2 , and DHCR24 were among the10 genes for which down-regulation was correlated with fast tumorrelapse according to Henshall et al. (Fig. 3B). The fifth androgenreceptor pathway gene, a-methylacyl-CoA racemase (AMACR), is awell-known marker for prostate carcinoma for which a reducedexpression in primary prostate carcinoma has been correlated withrecurrence before (28). We included AMACR together with anotherwell-known prostate carcinoma marker Hepsin as positive con-trols. Compared with normal prostate and nonmetastatic primaryprostate carcinoma, HERPUD1, STK39, and SOCS2 were signifi-cantly down-regulated in metastatic prostate carcinoma (Fig. 4A).The expression of HERPUD1, but not STK39, remained low inlymph node metastases. AMACR and Hepsin were the only twogenes with significantly higher expression in prostate carcinomathan normal prostate. The Kaplan-Meier results of the quartiles forthe occurrence of metastases after radical prostatectomy areshown in Fig. 4B . For HERPUD1 and STK39, none of the primaryprostate carcinomas within the three or two quartiles with highestexpression were metastatic (Fig. 4B). When the most optimalthreshold level per gene was selected on receiver operatorcharacteristic curves, low expression levels in primary prostatecarcinoma were significantly correlated with an increased rate ofdevelopment of a distant metastasis for all five androgen receptorpathway genes but not for Hepsin (P < 0.00005 for HERPUD1,P = 0.0001 for STK39, P = 0.02 for DHCR24 and SOCS2, P = 0.03for AMACR, and P = 0.11 for Hepsin, log-rank test). Low or highHERPUD1 expression almost perfectly predicted recurrence orno recurrence. The HERPUD1 expression value correctly classifiedthe 2 of 24 prostate carcinomas with Gleason score 6 and 2 of 14prostate carcinomas with Gleason score 7 that developed metas-tases. In addition, it also correctly classified the 2 of 8 prostatecarcinomas with Gleason score 8 that did not develop metastases.Peculiarly, the only misclassified tumor had a Gleason score 10from which a metastasis became apparent 4 months after radicalprostatectomy already. The hazard ratio (and 95% confidenceinterval) was 1.13 (0.22-5.88; P = 0.88) for the Gleason score and0.26 (0.11-0.64; P = 0.03) for HERPUD1 mRNA expression (Cox mul-tivariate regression analysis), indicating HERPUD1 to be a betterpredictor for recurrence than the Gleason score.Overexpression of HERPUD1 induces apoptosis. HERPUD1

(alias HERP, Mif1, SUP, and KIAA0025) is an endoplasmic reticulum(ER)–resident protein that is up-regulated during a variety of stressconditions (24, 29). We selected HERPUD1 to test whetheroverexpression affects cell viability. Overexpression of HERPUD1efficiently induced cell death (apoptotic nuclei) in both LNCaP andHep3B cells (Fig. 5A). The presence of apoptotic nuclei co-occurredwith a localization of HERPUD1 in the entire cytoplasm instead ofthe ER (Fig. 5A). Two deletion mutants of HERPUD1 were tested ascomparison. HERPUD1 lacking a transmembrane domain inducedapoptosis even more rapidly than WT HERPUD1 (Fig. 5B). Incontrast, HERPUD1 lacking the ubiquitin-like domain had a de-creased ability to induce apoptosis (Fig. 5B). These findings pointto a mechanism, in which release of HERPUD1 from the ER to the

cytoplasm induces apoptosis, which is mediated by the ubiquitin-like domain. We confirmed that HERPUD1 induced cell death viaactivation of apoptosis. HERPUD1 overexpression resulted in theactivation of caspase-3 (Fig. 5C and D) and DNA degradation asdetected by the TUNEL assay (data not shown).

Discussion

The current study shows that focusing on a set of target genesfrom one transcription factor can be a very valuable tool inunraveling the biological changes occurring during cancerprogression. The focus on the expression of androgen receptorpathway genes yielded new insights in the role of the androgenreceptor in the progression of prostate carcinoma. Our resultsindicate that changes in the androgen receptor pathway ratherthan a generally enhanced androgen receptor activity play a criticalrole in the development of more aggressive prostate carcinoma.Specific sets of androgen receptor pathway genes are down-regulated during the progression from well-differentiated prostatecarcinoma to high-grade prostate carcinoma, and this might bea prerequisite to acquire the ability to metastasize. Only fewandrogen receptor pathway genes remained highly expressed inmetastases compared with primary prostate carcinoma.Adaptations of the androgen receptor pathway between

normal prostate and primary prostate carcinoma. We selected200 androgen receptor pathway genes up-regulated by androgensin the prostate cancer cell line LNCaP and/or down-regulated oncastration in prostate cancer xenografts. We then assessed theexpression of these genes in clinical prostate carcinoma samples.A proportion of the androgen receptor pathway geneswere stroma

associated. Because prostate carcinoma contains less stromal cellsthan normal prostate, these stroma-associated genes were down-regulated in prostate carcinoma. The majority of the genes up-regulated in primary prostate carcinomawere tumor associated. Thisimplies that these androgen receptor pathway genes are up-regulatedin the malignant epithelial cells rather than simply reflecting theincrease of percentage of epithelial cells (26). Approximately half ofthe androgen receptor pathway genes are up-regulated in prostatecarcinoma, indicating an enhanced androgen receptor activity thathowever does not up-regulate all target genes. Apparently, prostatecarcinoma cells activate androgen receptor pathway genes that areless or not androgen responsive in normal prostate epithelial cells.Adaptations of the androgen receptor pathway between

low- and high-grade primary prostate carcinoma. The expres-sion levels of the androgen receptor pathway signature within thedata set of Lapointe et al. clearly differed between low- and high-grade prostate carcinoma (13). A subset of 33 androgen receptorpathway genes was higher expressed in low-grade prostatecarcinoma than in most of the high-grade tumors. A functionhas been ascribed to 28 from the 33 genes (see SupplementaryTable S3). Thirteen genes have been described to affect cell growthfrom which 6 act as proliferation inhibitors, 1 as proliferationinducer, and 3 as mediators of apoptosis. Six genes are a marker orinducer of differentiation, whereas two genes are involved in celladhesion. Down-regulation of these 33 genes therefore is expectedto be beneficial for cell proliferation and prevention of apoptosis,and this likely explains the difference in proliferation rate betweenlow- and high-grade prostate carcinoma.Adaptations of the androgen receptor pathway between

high-grade primary prostate carcinoma and metastases.Fifteen genes up-regulated in low-grade prostate carcinoma

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remained highly expressed in high-grade prostate carcinoma andwere down-regulated in metastases (see Supplementary Table S3).Twelve of these 15 genes have a known function, and most areinvolved in metabolism, exocytosis, transport, protein folding, orsignal transduction. DHCR24 has recently been shown to be a keymediator of Ras-induced senescence (30). Tumor protein D52

(TPD52) has been reported previously to be up-regulated inprostate carcinoma (31, 32). Apparently, high TPD52 expression isnot beneficial for growth of metastases.Eleven androgen receptor pathway genes remained highly

expressed in lymph node metastases as indicated by their higherexpression levels in these samples compared with normal prostate

Figure 4. Expression of five androgen receptor pathway genes as measured by quantitative real-time RT-PCR on an independent set of prostate cancer samples.A, box plots, expression of five androgen receptor pathway genes in prostate cancer samples. Well-known prostate cancer marker gene Hepsin was included ascomparison. Top, significant differences (P < 0.05, Mann-Whitney U test); boxes, interquartile range, which contains 50% of values; o or *, whiskers extending fromthe highest to lowest values, excluding outliers; line across the box, median; PC ! no MET or PC ! MET, primary prostate cancers that did or did not developdistant metastases; LN-MET, prostate cancer metastases in the lymph node. Expression in lymph node metastases was not assessed for SOCS2, DHCR24, andHepsin. X axis, number of patients per sample group. B, Kaplan-Meier curves for the metastasis-free time of patients with different expression levels in the primaryprostate cancer. 1st quartile, comprises the 25% of the patients with the lowest expression. RP, radical prostatectomy.

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(see Supplementary Table S2). SIM2 and AMACR have beenreported to positively affect prostate carcinoma growth (33, 34).Within our xenograft panel, both genes have a low expression levelin all xenografts lacking functional androgen receptor, suggesting

the androgen receptor as an important inducer for their expressionin prostate carcinoma. Only two genes, NOL8 and G1P2 , are higherexpressed in lymph node metastases than in primary prostatecarcinoma. However, both genes are highly expressed in lympho-cytes, and their high expression in lymph node metastases mighttherefore be due to contaminating lymphocytes.Down-regulation of androgen receptor pathway genes is

correlated to the ability to metastasize. Ten of the androgenreceptor pathway genes with high expression in primary prostatecarcinoma and low expression in metastases were included in a setof 152 genes (181 spots) for which down-regulation in primaryprostate carcinoma was associated with fast relapse after radicalprostatectomy (14). We confirmed this correlation for fiveandrogen receptor pathway genes using quantitative real-timeRT-PCR on an independent set of prostate carcinoma samples.For AMACR, this correlation has been reported recently usingimmunohistochemistry on tissue microarrays as well (28). In ourexperiments, HERPUD1 and STK39 were better predictors fordevelopment of metastases than AMACR . When using the mostoptimal threshold level of 3, low or high expression of HERPUD1mRNA in primary prostate carcinomas correlated perfectly withthe occurrence or nonoccurrence of distant metastases with theexception of one prostate carcinoma with Gleason score 10. Noneof the prostate carcinomas with STK39 mRNA relative expressionhigher than 7.8 developed a metastasis. Both HERPUD1 and STK39are stress response proteins and have been reported before to beup-regulated by androgens in LNCaP cells (24, 35–37). HERPUD1 isan ER-resident protein that is up-regulated during the unfoldedprotein response and after cellular stresses, such as amino aciddeprivation and oxidative stress. The unfolded protein responseresults in a temporary inhibition of protein synthesis. For chronicstress, this leads to activation of apoptotic pathways (38, 39).Interestingly, the HERPUD1 gene is localized at chromosome 16q,a region with high frequency of copy number losses in prostatecarcinoma and other types of cancer (40). HERPUD1 is consideredto be a protein that protects against apoptosis because knockoutof this gene causes cells to become less tolerant to stress (39). Ourtransfection experiments in both LNCaP and Hep3B cells indicatethat also high expression of HERPUD1 is not favorable to cells.HERPUD1 expression induces apoptosis, and this apoptoticpotential is affected by domain mutations of HERPUD1, showinga functional significance. Therefore, we expect that HERPUD1 actsas an apoptosis inhibitor on a shorter term and as an apoptosisinducer on a longer term.In summary, our results point out that prostate carcinoma cells

disable the HERPUD1- and STK39-related stress responses toacquiring the potency to metastasize. The HERPUD1 statuspromises to have high clinical utility as a biomarker to predicttumor recurrence. Its expression level might become a valuablecriterion for decisions about ‘‘watchful-waiting’’ protocols oraggressiveness of therapy. Because down-regulation can only bedetected when occurring in the majority of the cells, our findingson HERPUD1 also supports the earlier proposed view that thecharacteristics of the bulk of the tumor rather than that of a smallsubset of cells determine the metastatic capability (41).Evolution of the androgen receptor pathway during

prostate carcinoma progression. Our results lead to the fol-lowing model. In nonmalignant prostatic epithelial cells, the an-drogen receptor regulates genes that are mainly involved in thedifferentiation into a secretory epithelial cell and in this cell’sfunction of production of prostate fluid with all its components,

Figure 5. Overexpression of HERPUD1 induces apoptosis. A, green, Hep3Bcells transiently transfected for 1 day with HERPUD1; arrows, condensedapoptotic nuclei in the cells with HERPUD1 distributed over the entire cytoplasminstead of localized at the ER. B, deletion of the transmembrane domain (delTM) accelerates induction of apoptosis, whereas deletion of the ubiquitin-likedomain (del Ub-like domain) slows down induction of apoptosis by HERPUD1overexpressed in Hep3B cells. Representative of three experiments. a, b, and c,significant differences daily between a and b, b and c , and a and c (P < 0.01,Bonferroni). C, overexpression of HERPUD1 (green ) results in activation ofcaspase-3 (red). Hep3B cells were transiently transfected for 2 days withHERPUD1. Left, counterstaining of the nuclei with Hoechst 33342. D, activationof caspase-3 in HERPUD1-transfected Hep3B cells during time. a and b,significant differences between days (P < 0.01, Bonferroni).

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such as vesicles, proteins, and metabolites. Cell growth andapoptosis of normal epithelium are likely regulated indirectly bystromal-epithelial interactions. Tumorigenesis and androgen-dependent growth of prostate cancer are acquired traits oftencaused by chromosomal rearrangements leading to a fusion geneof the androgen-regulated TMPRSS2 promoter to the oncogenicETS family members (3). Androgen regulation in early-stage cancercells will drive not only growth but also differentiation and normalprostate functions. These cells will become more aggressive byselective down-regulation of androgen receptor pathway genes thatinhibit proliferation, induce differentiation, or mediate stressresponses and apoptosis. This down-regulation results in a higherproliferation rate and enhances the potency to metastasize.The present results provide novel insight and are expected to

have important consequences for the direction of future research.Taking advantage of the differentiation-promoting and cell growth–inhibiting effects of the androgen receptor might be a more pro-mising route to therapy development than attempts to fully blockandrogen receptor activity. For this, it will be essential to reveal

the mechanisms that mediate the selective down-regulation ofthe differentiation-promoting and proliferation-inhibiting genes.Eventually, this may lead to development of drugs that prevent orreverse the down-regulation of differentiation-promoting and cellgrowth–inhibiting genes.

Acknowledgments

Received 8/29/2005; revised 3/8/2006; accepted 3/17/2006.Grant support: Dutch Cancer Society (Amsterdam, the Netherlands) grant DDHK

2001-2455.The costs of publication of this article were defrayed in part by the payment of page

charges. This article must therefore be hereby marked advertisement in accordancewith 18 U.S.C. Section 1734 solely to indicate this fact.

We thank Drs. Hans C. Romijn and Theo H. van der Kwast for their participationin the development of the xenografts; Drs. Marcel Smid, Marion Meijer-van Gelder,and Mark Wildhagen for the support with statistical analyses; the Central Micro-array Facility (http://microarrays.nki.nl/) of the Dutch Cancer Institute for providingthe expression microarrays; Wilma Teubel, Monique Oomen, and Dr. Peter H.J.Riegman for providing the prostate carcinoma tissues (Erasmus Medical Center fro-zen tissue bank); and Dr. Michael J. Moorhouse and his mother for careful editing ofthe article.

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