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Early Warning: Climatic, Ecological Indicators and Risk Mapping Rift Valley Fever Workshop A I t t d A h t An Integrated Approach to Controlling Rift Valley Fever in Africa and the Middle East Assaf Anyamba and the Middle East NASA/Goddard Space Flight Center Biospheric Sciences Branch, Code 614.4, Greenbelt, MD 20771

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Page 1: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

Early Warning: Climatic, Ecological y g , gIndicators and Risk Mapping

Rift Valley Fever WorkshopA I t t d A h t An Integrated Approach to

Controlling Rift Valley Fever in Africa and the Middle East

Assaf Anyamba

and the Middle East

yNASA/Goddard Space Flight Center

Biospheric Sciences Branch, Code 614.4, Greenbelt, MD 20771

Page 2: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

Components of Early Warning SystemGlobal Climate Indicators: SSTs, OLR

Outbreak Evaluation Rainfall

Vector Ecology – RVF CycleInformation Dissemination

Ecological Dynamics – Vegetation IndexField Surveillance Support

Risk Mapping

Page 3: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

1a. Southern Oscillation Index

Page 4: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

1b. Sea Surface Temperatures

1c. Outgoing Longwave Radiation

Page 5: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

1d. SST Indicators: NINO3.4 SST, WIO

Page 6: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

2a. Rainfall – Total + Anomalies

Page 7: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

2b. Rainfall -- Cumulative

Page 8: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

2c. Rainfall Time Series

Page 9: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

3a. Vector Dynamics and Ecology

• Emergence and population expansion of a number of disease vectors (mosquitoes, mice, locusts) often tends to follow the trajectory of the green flush of vegetation in semi-arid landssemi-arid lands•Dry – Wet cycles appear to maintain the virus cycle through time

Page 10: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

3b. RVF Life CycleClimatic factors (heavy C at c acto s ( ea yand widespread rainfall)

Dry Season

Deposit RVF Infected Eggs

Aedes mcintoshi infectedwith RVF virus transovarially

Floodwater Aedes & Culex mosquitoes + direct transmission (aerosol, contact)

Rain

Endemic CycleVirus persists during dry

season/inter-epizootic period through vertical

Epidemic CycleFlooding results in mass

hatching of infected Aedeseggs and subsequent CulexRVF Virus introduced into domestic period through vertical

transmission in Aedesmosquito eggs

mosquitoes leading to RVF outbreak

Rainy SeasonRainRVF virus can be

introduced into domestic animals but

minimal

animals and humans, and extensiveamplification and secondary

transmission

Culex species - important secondary vectors of RVF

amplification and secondary

transmission

Anopheles mosquitoes not involved RVF transmission

Aedes species followed by Culex produced in large numberss

Only Aedes species produced during limited flooding

Page 11: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

3c. Moisture/Ecological Fluxes = Vector AbundanceSk k S th Af i (31 50E 25 02S)Skukuza, South Africa (31.50E, 25.02S)

MA

LY

mal

ies (

o C)

1

2

3

4

20

40

60

80 NINO 3.4 SST

NDVI ANOMALY

ND

VI %

AN

O

NIN

O 3

.4 S

ST a

no

4

-3

-2

-1

0

80

-60

-40

-20

0

-4-8081 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 00 01

Page 12: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

4a. Ecological Indicators: NDVI + anomalies

-

=

Page 13: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

4b. NDVI Time Series

Page 14: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

5a. RVF Risk Mapping: Setup• RVF – epizootics occur under favorable and persistent eco-

climatic conditionsC b d ith i f ll t ti th h • Can be mapped – either as rainfall or vegetation – through NDVI integrates all the required conditions

• Algorithm: – Mapping of potential epizootic areas – based on

literature survey and climate variable thresholding= potential epizootic area mask (PEAM) – (C. J. Peters & K.J. Linthicum in Handbook of Zoonoses)

– A given pixel is included within the potential epizootic area if and only if it satisfies one of the following rules for Africa and SW Arabia: o o g u es o ca a d S ab a(1)[(longitude between 25 and 33 E) OR (latitude < than 25 N and longitude > 33 E) OR (latitude < 20 N and longitude < 25 E) AND (mean monthly NDVI between 0.15 and 0.5 NDVI units) AND (mean annual total precipitation between 100 and 850 p pmm)]; OR (2)[(latitude between 24 and 36 N) AND (longitude between 30 and 35 E) AND (mean monthly NDVI between 0.15 and 0.5 NDVI units)].

– NDVI anomaly calculation -- + anomalies > 0.025 threshold (desert calibration) over 3 month periodthreshold (desert calibration) over 3 month period

– Persistently + anomalies must have three month mean > 0.1

– All “pixels” that meet this criteria and are within the PEAM are mapped to have conditions necessary for th f RVF ti itthe occurrence of RVF activity

Page 15: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

5b.RVF Risk Mapping – Dynamic Implementation

Page 16: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

3c. RVF Potential Risk Products

Page 17: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

6. Supporting Field Surveillance

USAMRU/GEIS-K Mosquito samplings sitesMosquito samplings sites

Page 18: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

7a. Information Dissemination Infrastructure

NASA/GSFC

http://www.geis.ha.osd.mil/RVFWeb/index.htm

GEIS-Hub

USAMRU-K FAO NAMRU3WHO

Early warnings incremental monthly publicKEMRI-KENYA REGIONS & COUNTRIES MIDDLE EAST

Early warnings – incremental monthly public domain, Alerts – customized e.g. EMPRES

Page 19: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

7b. FAO Alerts: Emergency Prevention System (EMPRES) for Transboundary Animal and Plant Pests and Diseasesy

http://www.fao.org/ag/againfo/programmes/en/empres/home.asp

Page 20: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

8a. Outbreak Validation and Assessment - Field Data

Collaboration with Partners: WHO, FAO, CDC, GEIS, NCID

Page 21: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

8b. Prediction vs. Outbreak Timing – 2006 - 2008Kenya Tanzania Somalia: 4-5 monthsKenya, Tanzania, Somalia: 4-5 months

Sudan: 5-6 months

Southern Africa: 2-3 Months

Anyamba et al (In Review AJTMH)Anyamba et al (In Review AJTMH)

Page 22: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

Conclusions• Early warning provided framework for response 1.5 – 2 months y g p p

compared to 1997-98, mid-Dec vs. mid-Feb• An unusual event in the WIO region developed leading to excess

rainfall over Sudan and the Sahel region in the summer of 2007 rainfall over Sudan and the Sahel region in the summer of 2007 leading to the potential for a RVF outbreak

• Forecasting conditions associated with vector-borne disease tb k i iti l f ti l d ffi i t l i f ti l outbreaks is critical for timely and efficient planning of operational

control programs• Global and resultant regional, local climate anomalies can be used g ,

to forecast potential disease risks that will give decision makers additional tools to make rational judgments concerning disease prevention and mitigation strategiesprevention and mitigation strategies

• Public Health & Trade – Economy Sectors of the economy that can benefit most from climate/environmental and short term climate forecastsclimate forecasts.

Page 23: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

Conclusions

• Good Early Warnings/Predictions are not Good Enough without Field Surveillance and Response Planningp g

• Early Warnings should be used to structure systematic response planning i e what can be done with a 3 4 5 response planning i.e. what can be done with a 3, 4, 5 month early warning – social mobilization, vector control, vaccination resource mobilization etcvaccination, resource mobilization etc

• Need for enhanced cooperation between MoH, Met Services and Livestock Development use of customized Services and Livestock Development – use of customized regional and country level seasonal climate forecasts

Page 24: Earlyyg , g Warning: Climatic, Ecological Indicators and ... › meetings › rvf2009 › ... · domestic animals but minimal animals and humans, and extensive amplification and secondary

Contributors• Assaf, Jennifer Small, Compton J. Tucker & Ed Pak: NASA/Goddard Space Flight Center, Biospheric Sciences

Branch, Code 614.4, GIMMS Group, Greenbelt, Maryland.p y• Kenneth J. Linthicum & Seth Britch: Center for Medical, Agricultural & Veterinary Entomology, Agricultural

Research Service, United States Department of Agriculture, Gainesville, Florida.• Clair Witt, Jean-Paul Chretien - Department of Defense, Global emerging Infections System, Division of

Preventive Medicine, Walter Reed Army Institute of Research, Washington, DC.• NOAA Climate Prediction Center, Camp Springs, Maryland.• USDA Foreign Agricultural Service (FAS), Washington D.C.

Field Surveillance & Data Supportpp• Jason Richardson, David Schnabel & USMARU/GEIS-K Entomological Team• Rosemary Sang & KEMRI Field Team• Robert Breiman, Allan Hightower CDC Team – Kenya

Pierre Formenty WHO;

Collaborators

• Pierre Formenty, WHO; • Stephan De La Rocque, FAO• Bob Swanepoel, NCID, South Africa

• Department of Defense, Global Emerging Infections Surveillance & Response System (DoD-GEIS)• World Health Organization – Pandemic Alert and Response Department, Geneva• Food and Agricultural Organization (FAO), Rome.

Collaborators