dynamical system of a two dimensional stoichiometric discrete producer-grazer model : chaotic,...

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Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor Yang Kuang and Professor Ying-chen Lai , Supported by Professor Carlos Castillo-Chavez (MTBI) and Professor Tom Banks (SAMSI)

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Page 1: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer

Model : Chaotic, Extinction and Noise Effects

Yun KangWork with Professor Yang Kuang and

Professor Ying-chen Lai ,Supported by Professor Carlos Castillo-Chavez

(MTBI) and Professor Tom Banks (SAMSI)

Page 2: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Outline of Today’s Talk Introduce LKE – model, and its corresponding discrete

case; Mathematical Analysis: bifurcation study Biological Meaning of Bifurcation Diagram; Chaotic behavior and Extinction of grazer; Nature of Carry Capacity K and Growth Rate b, and

their fluctuation by environments: adding noise Interesting Phenomenal by adding noise: promote

diversity of nature Conclusion and Future Work

Page 3: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Stoichiometry It refers to patterns of mass balance in chemical

conversions of different types of matter, which often have definite compositions

Page 4: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

most important thing about stoichiometry

we can not combine things in arbitary proportions; e.g., we can’t change the proportion of water and dioxygen produced as a result of making glucose.

Page 5: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Energy flow and Element cycling are two fundamental and unifying principles in ecosystem theory

Using stoichiometric principles, Kuang’s research group construct a two-dimensional Lotka–Volterra type model, we call it LKE-model for short

Page 6: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Assumptions of LKE Model

Assumption One: Total mass of phosphorus in the

entire system is closed, P (mg P /l) Assumption Two: Phosphorus to carbon ratio (P:C) in the

plant varies, but it never falls below a minimum q (mg P/mg C); the grazer maintains a constant P:C ratio, denoted by (mg P/mg C)

Assumption Three: All phosphorus in the system is divided into two pools: phosphorus in the plant and phosphorus in the

grazer.

Page 7: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Continuous Model

p is the density of plant (in milligrams of carbon per liter, mg C/l); g is the density of grazer (mg C/l); b is the intrinsic growth rate of plant (day−1); d is the specific loss rate of herbivore that includes metabolic losses (respiration)

and death (day−1); e is a constant production efficiency (yield constant); K is the plant’s constant carrying capacity that depends on some external factors

such as light intensity; f(p) is the herbivore’s ingestion rate, which may be a Holling type II functional

response.

Page 8: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Biological Meaning of Minimum Functions

),min(q

gPK

)/)(

,1min( pgP

e

K controls energy flow and (P − y)/q is the carrying capacity of the plant determined by phosphorus availability;

e is the grazer’s yield constant, which measures the conversion rate of ingested plant into its own biomass when the plants are P rich ( ); If the plants are P poor ( ),

then the conversion rate suffers a reduction.

pgP /)(

1

pgP /)(

1

Page 9: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Continuous Case:b=1.2 and b=2.9

Page 10: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Discrete Model From Continuous One

Motivation: Data collect from discrete time, e.g., interval for collecting data is a year.

Biological Meaning of Parameters : Modeling the dynamics of populations with non-overlapping generations is based on appropriate modifications of models with overlapping generations.

Choose

pa

cppf

)(

Page 11: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor
Page 12: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Mathematical Analysis

We study the local stability of interior equilibrium E*=(x*,y*)

Page 13: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Bifurcation Diagram and Its Biological Meaning

For continuous case: K=1.5

Page 14: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Bifurcation Diagrams on Parameter b

Page 15: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Bifurcation Diagrams on Parameter b

Page 16: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Bifurcation Diagrams on Parameter K

Page 17: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Relationship Between K and b:

From these figures, we can see that there is nonlinear relationship between K and b which effect the population of plant and grazer:For bifurcation of K, increasing the value of b,

the diagram of b seems shrink.For bifurcation of b, increasing the value of K,

bifurcation diagram seems move to the left

Page 18: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Extinction of Grazer

From bifurcation diagram, we can see that for some range of K and b, grazer goes to extinct. What are the reasons?

Page 19: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Basin Boundary For Extinction

Page 20: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Global Stability Conjecture

We know that Discrete Rick Model :

x(n+1)=x(n)exp{b(1-x(n)/K)} has global stability for b<2, does our system also has this properties

More general, if we have u(n+1)=u(n)exp{f(u(n),0} with global stability, then the following discrete system:

x(n+1)=x(n)exp{f(x(n),y(n))+g(x(n),y(n))}, of g(x,y) goes to zero as y tending to zero, in which condition has global stability

Page 21: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Nature of K and b

K is carrying capacity of plant, and it is usually limited by the intensity of light and space. Since K is easily affected by the environment, it will not be always a constant ;

b is maximum growth rate of plant, it will fluctuates because of environment changing.

Page 22: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Adding Noise

Because of the nature of biological meaning of K and b, it makes perfect sense to think these parameters as a random number.

We let K=K0+ w*N(0,1)

b=b0+w*N(0,1)

Page 23: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Then Most Interesting thing on parameter K :

Prevent extinction of grazer :

Page 24: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Time Windows

Page 25: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Scaling

Define the degree of existence :

R=average population of graze/ average population of plant

Then try different amplititute of noise w, then do the log-log scaling, it follows the scaling law.

Page 26: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor

Future Work

We would like to use “snapshot” method to see how noise effects the population of grazer and producer;

Try to different noise, e.g. color noise, to see how the ‘color’ effect the extinction of the grazer;

Page 27: Dynamical System of a Two Dimensional Stoichiometric Discrete Producer-Grazer Model : Chaotic, Extinction and Noise Effects Yun Kang Work with Professor