dr. albert rovira - diagnostic view of porcine epidemic diarrhea virus
DESCRIPTION
Diagnostic View of Porcine Epidemic Diarrhea Virus - Dr. Albert Rovira, Assistant Clinical Professor, Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, from the 2013 Allen D. Leman Swine Conference, September 14-17, 2013, St. Paul, Minnesota, USA. More presentations at http://www.swinecast.com/2013-leman-swine-conference-materialTRANSCRIPT
Porcine Epidemic Diarrhea Virus (PEDV)
Albert Rovira, DVM, MS, PhD Veterinary Diagnostic Laboratory
Porcine Epidemic Diarrhea
• PED is caused by a coronavirus (PEDV)
• PEDV causes diarrhea and vomiting in swine of all ages
• High mortality in piglets under 2 weeks of age
Porcine Epidemic Diarrhea
• PEDV first described in Europe in the 70s
• PED currently not a problem in Europe
• PED is an important problem in Asia
Porcine Epidemic Diarrhea
• PEDV replicates in the epithelial cells of the small intestine
• Incubation period: 1-2 days
• Shedding in feces: 7-11 days
• Immune response: mucosal and serological: serum antibodies at 7-14 dpi
Source: AASV
Diagnostics
• Same basic guidelines of diarrhea diagnostic workups
• Select live, acutely affected pigs with diarrhea
• Perform necropsy and collect samples within 15 minutes of euthanasia
• Gross lesions: liquid intestinal contents, thin-walled intestines?
Sample collection
• Small intestine:
– 6 sections representing the whole length of the small intestine
– 10 cm segments fresh and 2 cm segments fixed
• Other tissues for a complete workup and to rule out differential diagnoses
– Stomach, colon, tonsil, lymph node, lung, heart, spleen, liver, kidney -- fresh and fixed
Other sample types
• Feces
• Fecal swabs
• Oral fluids
• Feedback material
• Environmental swabs
• Feed
PEDV diagnostic tests• Virus isolation:
– Difficult to grow in vitro
• Electron Microscopy: – low sensitivity
• Histopathology:
– atrophic enteritis
– same as TGEV and Rotavirus
• Real time PCR:
– sensitive and specific
– available in US laboratories
PEDV diagnostic tests
• IHC, ISH:
– less sensitive than PCR
– good for research, retrospective studies
• Serology:
– Indicative of previous exposure
– IFA/IPMA: will be available first
– ELISA: available in Asia, under development in the US
Testing protocols
• Diagnostic investigation in farms with diarrhea:
– Tissues from acutely affected pigs
– Fecal samples: 15 samples in pools of 5 (3 PCRs)
– Oral fluid samples from 2 pens
• Monitoring the status of farms with no diarrhea:
– Fecal samples: 15 samples in pools of 5
– 2 oral fluid samples
– 10-15 serum samples for serology
Testing protocols
• Monitoring the status of positive sow farms after herd
closure
– Fecal samples: 30 samples in pools of 5
– Serology on sentinels?
• Example:
– 8 wks after clinical signs: 10/10 positives
– 12 wks after clinical signs: 7/30 positives
– 14 wks after clinical signs: 1/30 positives
First cases observed in May
0
5
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351
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7-M
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9-M
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2-M
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-May
6-M
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Negative
POSITIVE
>100 positive submissions in 2 months
0
100
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6001
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7-M
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9-M
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1-M
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12
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4-A
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16
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8-A
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20
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2-A
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24
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6-A
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28
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2-M
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-May
6-M
ay8
-May
10
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3-J
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5-J
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7-J
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9-J
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of
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Negative
POSITIVE
Were we ready for a foreign animal
disease outbreak?
• VDLs:
– Early identification of the disease
– PCR test available within days
– Real-Time PCR test available within 2 wk
(results in 24h)
• Immediate involvement of Universities,
USDA-APHIS, AASV, NPB
Sharing of lab results to obtain a
national monitoring system for PED
• U of Minnesota and ISU combined results -
database maintained at ISU
• Combined database transferred to USDA-APHIS–
NAHLN
• Weekly summary
• Collaboration Universities–USDA–AASV-NPB
MN VDL + ISU + SDSU + KSU + OHADDL
Distribution of PED positives
Courtesy of Dr. Dane Goede
Limitations of current national
monitoring system for PED
• Detail of the data: state, farm type, sample type,
result
• Quality of the data: missing/wrong data
• Quality of the data: reported by submission, not by
premise
• Include premises ID in submission form and give
permission to VDLs to share that info with national
database
Where did PED come from?
• Asia, Europe,…???
• How did it get here?
– Pigs
– People
– Feed
– Wildlife,…
• U of M, AAVLD and USDA-CEAH:
epidemiological study to answer these
questions
Courtesy of Doug Marthaler
Sequencing of
Spike gene
Did it come from feed products?
• Some feed ingredients tested positive by PCR
• We performed a bioassay to figure out is it was live
virus
• 3 pigs inoculated with PBS (negative controls)
• 3 pigs inoculated with PCR-positive feed products
(bioassay)
• 3 pigs inoculated with PCR-positive fecal samples
(positive controls)
Results bioassay
Vomit Diarrhea PED PCR Atrophic
enteritis
NEG Control No 1/3 0/3 0/3
Bioassay No No 0/3 0/3
POS Control YES 2/3 3/3 3/3
CONCLUSION: feed can contain PEDV nucleic acid
that is not infectious but can test positive by PCR