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Plant Name Reconciliationand
Data Extension
Matthew BlissettLead Biodiversity Informatician – Royal Botanic Gardens, Kew
8 December 2014
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Dataset with plant names
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…and taxonomic status from TPL
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How?
for i in $(< dataset ); do r=$(curl http://www.thep
lantlist.org/tpl1.1/ search?q=$i);
echo r | grep status >> output;
done
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Complications…
• Spreadsheet: Schinus longifolius var. paraguariensis (Hassler) F. Barkley
• The Plant List: Schinus longifolia var. paraguariensis F.A. Barkley
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How?
for i in $(< dataset ); do r=$(curl http://www.thep
lantlist.org/tpl1.1/ search?q=$i);
echo r | grep status >> output;
done
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Better way
Schinus longifolius var. paraguariensis(Hassler) F. Barkley
Taxonomic status of 229196-2?
229196-2
Synonym
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IPNI Reconciliation Service
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IPNI Reconciliation Service
![Page 10: Taxonomic Name Reconciliation and Data Extension (2014 Kew Science Away Day)](https://reader036.vdocuments.site/reader036/viewer/2022062711/55c064babb61ebd07c8b4592/html5/thumbnails/10.jpg)
IPNI Reconciliation Service
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OpenRefine
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Better way
Schinus longifolius var. paraguariensis(Hassler) F. Barkley
229196-2
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