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NCBO BioPortalNCBO BioPortal
Mark Musen, Benjamin Dai, Mark Musen, Benjamin Dai, and the BioPortal Teamand the BioPortal Team
February 26, 2008February 26, 2008
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NCBO BioPortal• The National Center for Biomedical Ontology (http:
//bioontology.org) is developing BioPortal, an open-source repository of ontologies, terminologies, and thesauri of importance in biomedicine.
• An early version of BioPortal is accessible at http://bioportal.bioontology.org. Users can access the BioPortal content interactively via Web browsers or programmatically via Web services.
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BioPortaladopts alayered architecture
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NCBO Products and Technologies Landscape
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New BioPortal prototype• New features include:
– Visualization– Mappings between ontologies– “Marginal notes” to annotate ontologies
• To join the testing team, visit our Web site:– URL: http://alpha.bioontology.org– Email Feedback: [email protected]
• An active BioPortal user group is providing feedback on new features and guiding future development work
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Feature: Browse Ontologies
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Feature: Multiple Ontology Navigation
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Feature: Mappings between Ontologies
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Feature: Create Mapping
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Feature: Links to Online Data Repositories
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Feature: Marginal Notes
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Feature: BioPortal Ontology Developer Home Page
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BioPortal will offer
• Ontology repository functionality• Linkages among different ontologies• Community-based peer review and ontology
annotation• Linkages between ontology content and
related online data repositories• Support for communities of ontology users
and developers