do irish periodic paralysis patients have a common genetic ...do irish periodic paralysis patients...

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Do Irish periodic paralysis patients have a common genetic origin? Jessica Neville 1 , David A. Shilling 1 , Aisling M. Ryan 2 and Collette K. Hand 1 1 Department of Pathology, University College Cork, 2 National Neuroscience Centre, Cork University Hospital and University College Cork Abstract Introduction: Periodic Paralyses (PPs) are rare autosomal dominantly inherited skeletal muscle channelopathies characterised by episodic weakness secondary to abnormal muscle excitability. PPs are broadly classified into hyperkalaemic (HyperPP) or hypokalaemic (HypoPP) based on serum potassium (K + ) levels. HypoPP is caused by mutations in CACNA1S and SCN4A while the less frequent HyperPP is generally caused by SCN4A gene mutations. We have recruited a growing cohort of Irish PP patients for which comprehensive clinical and genetic data has been gathered. We believe that this group of PP patients are phenotypically and genetically distinct. Firstly, contrary to publications, we have detected more HyperPP than HypoPP. Secondly, we have detected only one of the common SCN4A gene mutations and finally each of the patients is unusual clinically with attacks of longer duration and increased severity. Aims: To investigate this group of Irish periodic paralysis patients in which the same gene defect has been described to determine whether there is a common genetic background by performing haplotype analysis of polymorphic microsatellite markers in the SCN4A gene region. Results: We studied a haplotype of the SCN4A gene region on chr17q in 10 PP patients carrying a heterozygous SCN4A M1592V mutation and 6 M1592V negative controls from the Irish population. Study of 10 microsatellites revealed a common region among affected mutation‐positive individuals that is absent in controls. Conclusions: The Irish PP cohort recruited to date is unique in its clinical and genetic profile. This study provides evidence that the SCN4A M1592V mutation carriers share a genomic region and suggests a common genetic background. These results will influence the diagnosis and management of these patients. Introduction Periodic paralyses (PPs) are inherited skeletal muscle channelopathies characterised by episodic flaccid weakness secondary to abnormal muscle excitability. Features Symptoms generally begin in the first 2 decades Autosomal dominant inheritance, high penetrance Triggers include diet and rest after exercise Often changes in extracellular potassium Initially normal strength between attacks, but late development of a fixed proximal myopathy may occur The treatment of PP may be influenced by available genotype data. Classification Hypokalaemic periodic paralysis (HypoPP) Hyperkalaemic periodic paralysis (HyperPP) Andersen‐Tawil syndrome (ATS) Irish Periodic Paralysis Cohort To date we have recruited 8 distinct families (16 individuals) affected with PP. The cohort comprises 2 HypoPP families (2 individuals) and 6 HyperPP families (14 individuals). Point 1: Published data indicates that HypoPP is more common than HyperPP Of the 6 HyperPP families, a confirmed SCN4A mutation has been detected in 4 families (10 individuals); all carry a heterozygous M1592V mutation. Point 2: Published data indicates that T704M is 23 times more common than M1592V mutation. None of our samples carry T704M mutation. The phenotype of our HyperPP patients is unusual clinically in the severity and longevity of attacks. Point 3: Unusual phenotype. This phenotypegenotype correlation appears to be particular to this cohort raising questions regarding the origins of the mutation in the population. Aim The aim of this study is to analyse the genomic region containing the SCN4A gene to determine if the M1592V positive patients share a common genetic background. Methods Study was approved by the Clinical Research Ethics Committee of the Cork Teaching Hospitals. Informed consent obtained from all participants. Clinical Patients were previously recruited through Cork University Hospital ‐ a national referral centre for neuromuscular channelopathies. Clinical details, family history, age at onset, type and duration of attacks, laboratory investigations and genetic testing results were collated. Genetics Genomic DNA extracted from blood Ten microsatellite polymorphic markers in the region of the SCN4A gene were selected with one primer fluorescently tagged. PCR‐amplification of gene fragments in 10 M1592V positive, 6 M1592V negative and 2 CEPH control samples. Fragment analysis to genotype samples for each polymorphism (ABI3130). Haplotype analysis and comparison of mutation positive and negative samples. Results Clinical The phenotype of all SCN4A M1592V heterozygous HyperPP patients showed unusual prolonged attack duration (days rather than hours) and severity (bedbound with tetraparesis). Genetics Genotypes were generated for 16 PP samples across 10 markers. Using CEPH samples as references, alleles were recorded according to the CEPH database. Samples which carry a single copy of the SCN4A M1592V mutation share a region that spans from D17S1604 to D17S1351 and contains the SCN4A gene. The shared haplotype is 14.5 cM, 12.7 Mb in size and is not present in controls (M1592V negative). Table with genotype and haplotype results. Ten mutation positive samples and 6 mutation negative controls (grey boxes) were analysed. There is a shared genomic region (highlighted in dark green) in the heterozygous M1592V samples that is not present in the controls, although some carry individuals alleles of the haplotype (pale green). The haplotype is defined by D17S1604 and D17S1351, (common alleles in pale blue). Some genotypes could not be determined (). Discussion The cohort of Irish hyperkalaemic periodic paralysis patients recruited to date have a number of features that suggest they may share a common genetic background. We have previously reported that in the Irish population, HyperPP is more common than HypoPP and that the SCN4A M1592V mutation is the predominant cause of the disease, associated with an unusual clinical presentation. Here we present evidence that patients carrying the mutation share a 14.5 cM / 12.7 Mb haplotype containing the SCN4A gene that is absent in mutation‐negative controls which provides evidence that this mutation originated in the population as a single event in a common ancestor. Of the 7 markers within the disease haplotype, in only 2 (D17S808, D17S2193) is the allele in the haplotype the most common allele in the CEPH database. SCN4A encodes a voltage gated sodium channel and mutations are identified in ~50% of HyperPP cases. The most common mutations are T704M (~60%), M1592V (~25%) and I693T (~15%) with 6 other minor mutations reported. Families and patients originate from different areas of Ireland and are not known to be related. Control samples are SCN4A M1592V‐negative Irish individuals; two carry HypoPP mutations, two are relatives of HyperPP patients and two are affected by HyperPP but as yet do not have a confirmed gene mutation . This work indicates that the SCN4A M1592V mutation is the main cause of HyperPP in the Irish population due to a common ancestral haplotype and this information should lead to more accurate management, targeted gene screening and potential participation in therapeutic studies. Acknowledgements We thank the patients and families for participation in this study. This work is supported by the UCC School of Medicine Translational Research Access Programme (TRAP) and by a Wellcome Trust Summer Vacation Scholarship.

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Page 1: Do Irish periodic paralysis patients have a common genetic ...Do Irish periodic paralysis patients have a common genetic origin? Jessica Neville 1, David A. Shilling 1, Aisling M

DoIrishperiodicparalysispatientshaveacommongeneticorigin?

Jessica Neville1, David A. Shilling1, Aisling M. Ryan2 and Collette K. Hand1

1Department of Pathology, University College Cork, 2National Neuroscience Centre, Cork University Hospital and University College Cork

AbstractIntroduction: Periodic Paralyses (PPs) are rare autosomal dominantly inherited skeletalmuscle channelopathies characterised by episodic weakness secondary to abnormalmuscle excitability. PPs are broadly classified into hyperkalaemic (HyperPP) orhypokalaemic (HypoPP) based on serum potassium (K+) levels. HypoPP is caused bymutations in CACNA1S and SCN4A while the less frequent HyperPP is generally caused bySCN4A gene mutations.We have recruited a growing cohort of Irish PP patients for which comprehensive clinicaland genetic data has been gathered. We believe that this group of PP patients arephenotypically and genetically distinct. Firstly, contrary to publications, we have detectedmore HyperPP than HypoPP. Secondly, we have detected only one of the common SCN4Agene mutations and finally each of the patients is unusual clinically with attacks of longerduration and increased severity.Aims: To investigate this group of Irish periodic paralysis patients in which the samegene defect has been described to determine whether there is a common geneticbackground by performing haplotype analysis of polymorphic microsatellite markers inthe SCN4A gene region.Results:We studied a haplotype of the SCN4A gene region on chr17q in 10 PP patientscarrying a heterozygous SCN4A M1592V mutation and 6 M1592V negative controls fromthe Irish population. Study of 10 microsatellites revealed a common region amongaffectedmutation‐positive individuals that is absent in controls.Conclusions: The Irish PP cohort recruited to date is unique in its clinical and geneticprofile. This study provides evidence that the SCN4A M1592V mutation carriers share agenomic region and suggests a common genetic background. These results will influencethe diagnosis and management of these patients.

IntroductionPeriodic paralyses (PPs) are inherited skeletal muscle channelopathiescharacterised by episodic flaccid weakness secondary to abnormal muscleexcitability.Features• Symptoms generally begin in the first 2 decades• Autosomal dominant inheritance, high penetrance• Triggers include diet and rest after exercise• Often changes in extracellular potassium• Initially normal strength between attacks, but late development of

a fixed proximal myopathy may occur• The treatment of PP may be influenced by available genotype data.Classification• Hypokalaemic periodic paralysis (HypoPP)• Hyperkalaemic periodic paralysis (HyperPP)• Andersen‐Tawil syndrome (ATS)

Irish Periodic Paralysis Cohort• To date we have recruited 8 distinct families (16 individuals) affected with PP.

The cohort comprises 2 HypoPP families (2 individuals) and 6 HyperPP families(14 individuals).Point 1: Published data indicates that HypoPP is more common than HyperPP

• Of the 6 HyperPP families, a confirmed SCN4A mutation has been detected in 4families (10 individuals); all carry a heterozygous M1592V mutation.Point 2: Published data indicates that T704M is 2‐3 times more common thanM1592V mutation. None of our samples carry T704M mutation.

• The phenotype of our HyperPP patients is unusual clinically in the severity andlongevity of attacks.Point 3: Unusual phenotype.

This phenotype‐genotype correlation appears to be particular to this cohortraising questions regarding the origins of the mutation in the population.

AimThe aim of this study is to analyse the genomic region containing the SCN4A geneto determine if the M1592V positive patients share a common genetic background.

Methods• Study was approved by the Clinical Research Ethics Committee of the Cork

Teaching Hospitals. Informed consent obtained from all participants.Clinical• Patients were previously recruited through Cork University Hospital ‐ a national

referral centre for neuromuscular channelopathies.• Clinical details, family history, age at onset, type and duration of attacks,

laboratory investigations and genetic testing results were collated.Genetics• Genomic DNA extracted from blood• Ten microsatellite polymorphic markers in the region of the SCN4A gene were

selected with one primer fluorescently tagged.• PCR‐amplification of gene fragments in 10 M1592V positive, 6 M1592V negative

and 2 CEPH control samples.• Fragment analysis to genotype samples for each polymorphism (ABI3130).• Haplotype analysis and comparison of mutation positive and negative samples.

ResultsClinical• The phenotype of all SCN4A M1592V heterozygous HyperPP patients showed

unusual prolonged attack duration (days rather than hours) and severity(bedbound with tetraparesis).

Genetics• Genotypes were generated for 16 PP samples across 10 markers. Using CEPH

samples as references, alleles were recorded according to the CEPH database.• Samples which carry a single copy of the SCN4A M1592V mutation share a

region that spans from D17S1604 to D17S1351 and contains the SCN4A gene.• The shared haplotype is 14.5 cM, 12.7 Mb in size and is not present in controls

(M1592V negative).

Table with genotype and haplotype results. Ten mutation positive samples and 6 mutationnegative controls (grey boxes) were analysed. There is a shared genomic region(highlighted in dark green) in the heterozygous M1592V samples that is not present in thecontrols, although some carry individuals alleles of the haplotype (pale green). Thehaplotype is defined by D17S1604 and D17S1351, (common alleles in pale blue). Somegenotypes could not be determined (‐).

DiscussionThe cohort of Irish hyperkalaemic periodic paralysis patients recruited to datehave a number of features that suggest they may share a common geneticbackground. We have previously reported that in the Irish population, HyperPP ismore common than HypoPP and that the SCN4A M1592V mutation is thepredominant cause of the disease, associated with an unusual clinical presentation.Here we present evidence that patients carrying the mutation share a 14.5 cM /12.7 Mb haplotype containing the SCN4A gene that is absent in mutation‐negativecontrols which provides evidence that this mutation originated in the populationas a single event in a common ancestor.Of the 7 markers within the disease haplotype, in only 2 (D17S808, D17S2193) isthe allele in the haplotype the most common allele in the CEPH database.SCN4A encodes a voltage gated sodium channel and mutations are identified in~50% of HyperPP cases. The most common mutations are T704M (~60%),M1592V (~25%) and I693T (~15%) with 6 other minor mutations reported.Families and patients originate from different areas of Ireland and are not knownto be related. Control samples are SCN4A M1592V‐negative Irish individuals; twocarry HypoPP mutations, two are relatives of HyperPP patients and two areaffected by HyperPP but as yet do not have a confirmed gene mutation .This work indicates that the SCN4A M1592V mutation is the main cause ofHyperPP in the Irish population due to a common ancestral haplotype and thisinformation should lead to more accurate management, targeted gene screeningand potential participation in therapeutic studies.

AcknowledgementsWe thank the patients and families for participation in this study. This work issupported by the UCC School of Medicine Translational Research AccessProgramme (TRAP) and by a Wellcome Trust Summer Vacation Scholarship.