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DMD #21956
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Identification of stereoisomeric metabolites of meisoindigo in rat liver
microsomes by achiral and chiral LC-MS/MS
Meng Huang, Lin Tang Goh, and Paul C. Ho
Department of Pharmacy, Faculty of Science, National University of Singapore,
Singapore (M. H., P.C.H.); Market Development & Applications, Waters Asia
Headquarter, Waters Asia Limited, Singapore (L.T.G.)
DMD Fast Forward. Published on August 18, 2008 as doi:10.1124/dmd.108.021956
Copyright 2008 by the American Society for Pharmacology and Experimental Therapeutics.
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Running title: In vitro metabolism of meisoindigo
Address correspondence to: Paul C. Ho, Department of Pharmacy, National
University of Singapore, 18 Science Drive 4, Singapore 117543 Tel: +(65)
65162651 Fax: +(65) 67791554 Email: [email protected]
Number of text pages: 29
Number of tables: 4
Number of figures: 9
Number of references: 15
Number of words in the Abstract: 178
Number of words in the Introduction: 662
Number of words in the Discussion: 1208
Abbreviations: CML, chronic myelogenous leukemia; HPLC, high
performance liquid chromatography; UPLC, ultra performance liquid
chromatography; MS, mass spectrometry; MS/MS, tandem mass spectrometry;
ESI, electrospray ionization; QTRAP, hybrid triple quadrupole linear ion trap;
QTOF, hybrid quadrupole time of flight; NMR, nuclear magnetic resonance; IR,
infrared.
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ABSTRACT:
N-methylisoindigotin, abbreviated as meisoindigo, has been a routine
therapeutic agent in the clinical treatment of chronic myelogenous leukemia in
China since the 1980s. However, information relevant to in vitro metabolism of
meisoindigo is limited. In this study, in vitro stereoisomeric metabolites of
meisoindigo in rat liver microsomes were identified for the first time, by achiral
and chiral liquid chromatography / tandem mass spectrometry, together with
proton NMR spectroscopy and synchrotron infrared spectroscopy. The major
in vitro phase I metabolites of meisoindigo were tentatively identified as
stereoselective reduced-meisoindigo, which comprised a pair of (3-R, 3’-R)
and (3-S, 3’-S) enantiomers with lower abundance, as well as another pair of
(3-R, 3’-S) and (3-S, 3’-R) enantiomers with higher abundance. One type of
minor in vitro metabolites were tentatively identified as stereoselective
N-demethyl-reduced-meisoindigo including a pair of (3-R, 3’-R) and (3-S, 3’-S)
enantiomers, as well as one meso compound. Another type of minor in vitro
metabolites were tentatively identified as both stereoselective and
regioselective monohydroxyl-reduced-meisoindigo. Based on the metabolite
profiling, three parallel metabolic pathways of meisoindigo in rat liver
microsomes were proposed.
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Introduction
Meisoindigo(3-(1,2-Dihydro-2-oxo-3H-indol-3-ylidene)-1,3-dihydro-1-methyl-2
H-indol-2-one), a synthetic derivative of indirubin from a traditional Chinese
medicine recipe, has been a routine therapeutic agent in the clinical treatment
of chronic myelogenous leukemia (CML) in China since 1980s (Cooperative
Group of Clinical Therapy of Meisoindigo, 1988; Xiao et al., 2000; Xiao et al.,
2002). A recent study indicated that the anti-angiogenesis effect of
meisoindigo may contribute to the anti-leukemic effect of this drug (Xiao et al.,
2006). Meisoindigo was equally efficient for both treated and previously treated
CML patients. The hematological complete response (CR) and partial
response (PR) rates were 45.0% and 39.3% for newly diagnosed patients and
35.9% and 41.4% for pretreated patients (Cooperative Group of Phase III
Clinical Trial on Meisoindigo, 1997). In addition, based on retrospective
analysis on the efficiency of different treatments for 274 CML patients followed
over a period of 5 years, meisoindigo in combination with hydroxyurea
significantly prolonged median duration of chronic phase and median survival,
as well as reduced incidence of blast crisis compared with meisoindigo or
hydroxyurea alone, which strongly indicated that meisoindigo has a synergistic
effect with hydroxyurea (Liu et al., 2000; Xiao et al., 2000). Meisoindigo was
generally well tolerated. The most frequent side effects were bone, joint and /
or muscle pain of varying degrees when the dosage was more than the
suitable dose. Approximately 30% of patients had mild nausea and vomiting.
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(Cooperative Group of Clinical Therapy of Meisoindigo, 1988; Cooperative
Group of Phase III Clinical Trial on Meisoindigo, 1997; Liu et al., 2000; Xiao et
al., 2000).
In order to improve the understanding of its efficacy and safety characteristics,
investigation of meisoindigo metabolism in animals or humans plays a critical
role. However, few publications relevant to this topic have been reported so far.
According to the literature survey information, only one individual study was
highly relevant to meisoindigo metabolism (Peng and Wang, 1990). In that
study, in vitro metabolism of meisoindigo in male rat liver microsomes was
investigated by reversed-phase high performance liquid chromatography
(RP-HPLC) with diode array detector (DAD). Based on the UV chromatogram
comparison of control and sample with parallel preparation, it was proposed
that ten chromatographic peaks were potential in vitro metabolites of
meisoindigo. Among them, two major chromatographic peaks were purified by
preparative thin layer chromatography (TLC) and predicted to be monohydroxy
metabolites based on preliminary electron impact (EI) MS results. However,
there are a few severe drawbacks with regard to its experimental design. The
substrate concentration adopted in that study far exceeded the upper limit of
the typical concentration range (10-50 μM) in metabolite identification
experiments (Chen et al., 2007). In addition, liquid-liquid extraction (LLE)
performed in that study was likely to cause the metabolites loss (Clarke et al.
2001), due to the fact that physicochemical properties of metabolites present
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are unknown in a certain extraction solvent or a mixed extraction solvent
system. Therefore, in vitro metabolism of meisoindigo in male rat liver
microsomes still need to be investigated with an appropriate experimental
design.
Diverse bioanalytical technologies have been applied in the field of drug
metabolism, such as radioimmunoassay (RIA), gas chromatography/mass
spectrometry (GC/MS), liquid chromatography (LC) with UV, fluorescence,
radioactivity or tandem mass spectrometry (MS/MS). Among these
technologies, liquid chromatography coupled with tandem mass spectrometry
(LC-MS/MS) has now become the most powerful tool owing to its superior
specificity, sensitivity and efficiency (Kostiainen et al., 2003). However,
LC-MS/MS alone does not always provide sufficient information for structural
characterization of metabolites, particularly in the aspects of identifying the
exact position of oxidation, differentiating isomers, or providing the precise
structure of unusual and/or unstable metabolites (Prakash et al., 2007). In
these cases, other analytical technologies such as nuclear magnetic
resonance (NMR), infrared (IR) or even chiral chromatography analysis have
to be utilized to supplement additional information.
In light of these considerations mentioned above, the purpose of the present
study was to qualitatively identify the in vitro metabolites of meisoindigo in rat
liver microsomes utilizing online LC-MS/MS and other relevant techniques if
necessary.
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Materials and Methods
Chemicals. All chemicals were of analytical grade and used without further
purification. Meisoindigo was provided by Institute of Materia Medica, Chinese
Academy of Medical Sciences and Peking Union Medical College, Beijing,
China. Bradford reagent, bovine serum albumin (BSA), β-NADPH, Dimethyl
sulfoxide (DMSO), ammonium acetate, palladium on carbon (Pd/C) and
Deuterochloroform (CDCl3) were purchased from Sigma Chemical Co. (St.
Louis, Mo, USA). HPLC grade methanol and acetonitrile were purchased from
Fisher Scientific Co. (Fair Lawn, NY, USA). Milli-Q water was obtained from a
Millipore water purification system (Billerica, MA, USA) and used to prepare
buffer solutions and other aqueous solutions.
Liver microsomal preparation. Pooled rat liver microsomes were prepared
according to the method reported previously (Gibson and Skett, 1994). Male
Sprague-Dawley (SD) rats were obtained from Animal Holding Unit, National
University of Singapore. Three rats were euthanized with CO2 after a 24-h
fasting period. The pooled extracted liver microsomes were suspended in
0.1M Tris buffer (PH 7.4) and stored at -80℃ before use. The microsomal
protein contents were determined by Bradford assay method, using BSA as
the standard protein (Bradford, 1976).
Liver microsomal incubations. Meisoindigo stock solution in DMSO was
added to 0.1M Tris buffer (pH 7.4) with rat liver microsomes. The mixture was
first shaken for 5min for equilibration in a shaking water bath at 37℃. The
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incubation was then initiated by adding β-NADPH solution. The final
concentrations of meisoindigo, NADPH and the microsomal protein were
50μM, 1mM and 1mg/mL, respectively in a typical incubation mixture (1mL).
The percentage of DMSO in the incubation mixture was kept less than 0.2 %
(v/v). Controls were prepared either by substituting microsomal protein
previously heated to 70-100℃ for 10 min or by replacing NAPDH with water.
Samples were incubated for 60 min and the reaction was terminated with the
same volume of ice-cold acetonitrile to precipitate proteins. Samples were
subsequently centrifuged at 14000 rpm for 15 min. The supernatant was taken
and analyzed by LC-MS/MS. All experiments were carried out in duplicate.
Achiral LC-MS/MS analysis.
HPLC-QTRAP. 5 μL of controls and samples were analyzed on a Q TRAP™
2000 LC-MS/MS system from Applied Biosystems / MDS Sciex (Concord,
Ontario, Canada) coupled to an Agilent 1100 HPLC system (Agilent
Technologies, Palo Alto, CA, USA). Separations were accomplished on a
Agilent hypersil ODS column (100 ×2.1 mm, 5 μm) (Agilent Technologies, Palo
Alto, CA, USA) with a guard cartridge at ambient temperature of about 22℃.
The mobile phase consisted of 10mM ammonium acetate in water (solvent A)
and methanol (solvent B) and was delivered at a flow rate of 0.2 mL/min. The
linear gradient elution program was as follows: 30% to 100% B over 12 min,
followed by an isocratic hold at 100% B for another 3 min. At 15 min, B was
returned to 30% in 1 min and the column was equilibrated for 19 min before the
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next injection. The total run time was 35 min. During LC-MS/MS analysis, up to
3 min of the initial flow was diverted away from the mass spectrometer before
evaluation of metabolites. The mass spectrometer was operated in the positive
ion mode with a TurboIonSpray source. The parameter conditions were
optimized as follows: curtain gas (CUR), 30 (arbitrary units); ion source gas 1
(GS1), 50 (arbitrary units); ion source gas 2 (GS2), 60 (arbitrary units); source
temperature (TEM), 300℃; declustering potential (DP), 26V; collision energy
(CE), 35eV; entrance potential (EP), 4.5V. Enhanced Q3 Single MS (EMS) and
Enhanced Product Ion (EPI) were utilized to obtain structural information of the
metabolites. The MS full scan range was set to m/z 50-350. The mass
spectrometer and the HPLC system were controlled by Analyst 1.4.1 software
from Applied Biosystems / MDS Sciex.
UPLC-QTOF. Accurate mass spectral data for the metabolites were obtained
with a Q-TOFTM Premier mass spectrometer (Waters Micromass, Manchester,
UK) coupled to an ACQUITY UPLCTM system (Waters Corporation, Milford,
MA, USA). The separations were performed on an ACQUITY UPLC BEH C18
column (100 × 2.1 mm, 1.7 μm). The column was maintained at 40 ℃ and
eluted with a mobile phase consisting of 0.1% formic acid in water (solvent A)
and 0.1% formic acid in methanol (solvent B) at 0.4 mL/min. The gradient
elution program was as follows: 30% to 95 % B over 6 min, followed by
increasing to 99 % B over 0.1 min. Then B was returned to 30 % in 0.1 min and
the column was equilibrated for 1.8 min before the next injection. The total run
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time was 8 min. The autosampler chamber was maintained at 10 ℃ and the
injection volume was 4 μL. The column eluent was directed to the mass
spectrometer for analysis. The mass spectrometer was equipped with an
electrospray ionization source and operated in the positive ionization mode.
Full-scan spectra were acquired from 50 to 1000 m/z with a scan time of 0.3 s.
The capillary and cone voltages were 3.0 kV and 25 V, respectively. The
source and desolvation temperatures were 90°C and 180°C, respectively. The
desolvation gas flow rate was 400 L/h and the cone gas flow rate was 10 L/h.
The collision energy was set at 4 eV. All analyses were acquired using an
independent reference spray via the LockSprayTM interference to ensure
accuracy and reproducibility. The [M+H]+ ion of sulfadimethoxine was
employed as the lock mass (m/z 311.0814). The LockSpray frequency was set
at 15 s. The accurate masses and compositions for the precursor ions were
calculated using the MassLynx V4.0 software incorporated in the instrument.
Search for metabolites. The total ion chromatograms (TIC) of controls and
samples for the EMS were first compared. The search for structure-related
metabolites of meisoindigo was performed manually by interpretation of mass
spectra and chromatograms. The possible molecular masses of metabolites
were screened out based on known mass shift of metabolites such as +16 for
hydroxylation. The corresponding EPI (MS/MS) of potential metabolites were
subsequently compared with that of meisoindigo to investigate the
fragmentation patterns and obtain information on the metabolite structures.
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Besides, MS/MS/MS of certain product ions gave more evidence about the
deduction of fragmentation mechanism. QTOF data also provided the accurate
masses and potential formulae to further confirm the structures of metabolites.
Isolation of metabolites by preparative HPLC and MS/MS/MS. The major
metabolites were isolated from a large-scale phenobarbital-induced rat liver
microsomal inbubation by Agilent 1100 preparative HPLC system (Agilent
Technologies, Palo Alto, CA, USA) on a Combi-A C18 column (50 × 20 mm, 5
μm) (Peeke Scientific, Redwood City, CA, USA) with a guard cartridge at
ambient temperature. The mobile phase consisted of water (solvent A) and
methanol (solvent B) and was delivered at a flow rate of 4 mL/min. The linear
gradient elution program was as follows: 30% to 100% B over 20 min, followed
by an isocratic hold at 100% B for another 5 min. At 25 min, B was returned to
30% in 1 min and the column was equilibrated for 4 min before the next
manual injection. The UV absorbance was monitored at 254 nm. All isolated
metabolites fractions were lyophilized and redissolved in 50% methanol/water
before chiral separation or direct infusion for MS/MS/MS analysis.
Chiral LC-MS/MS analysis. The rat liver microsomal samples and isolated
metabolite fractions were analyzed on a Q TRAP™ 3200 LC-MS/MS system
from Applied Biosystems / MDS Sciex (Concord, Ontario, Canada) coupled to
an Agilent 1200 HPLC system (Agilent Technologies, Palo Alto, CA, USA). The
volume of 20 μl was injected onto a Chiralcel OD-R column (250 × 4.6mm, 10
μm) (Daicel Chemical Industries, LTD., Japan) with a guard cartridge at
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ambient temperature. The isocratic mobile phase consisted of 20% water
(solvent A) and 80% methanol (solvent B) and was delivered at a flow rate of
0.4 mL/min. The total run time was 35 min. The mass spectrometer was
operated in the positive ion mode with a TurboIonSpray source. The parameter
conditions were optimized as follows: curtain gas (CUR), 20 (arbitrary units);
ion source gas 1 (GS1), 30 (arbitrary units); ion source gas 2 (GS2), 40
(arbitrary units); source temperature (TEM), 450℃; declustering potential (DP),
35V; collision energy (CE), 30eV; entrance potential (EP), 10V. Enhanced Q3
Single MS (EMS) was utilized to scan the mass range of m/z 50-700. The
mass spectrometer and the HPLC system were controlled by Analyst 1.4.2
software from Applied Biosystems / MDS Sciex.
Metabolite synthesis and purification. The starting material meisoindigo (50
mg) was dissolved in methanol (100 mL). After adding 10% palladium on
carbon (10 mg), the mixture was placed on the hydrogenator apparatus and
kept shaking at 40 psi for 2 h at room temperature. LC-MS was used to
monitor the consumption of starting material. The reaction mixture was filtered
through filter paper and the filter pad was washed with distilled water. The
filtrate was evaporated under reduced pressure and the precipitate was
purified by the same preparative HPLC and column described above. The
isocratic mobile phase consisted of 50% water (solvent A) and 50% methanol
(solvent B) and was delivered at a flow rate of 4 mL/min within 20 min. The UV
absorbance was monitored at 254 nm. All isolated metabolites fractions were
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evaporated under reduced pressure and stored under -20 ℃ before NMR
measurement.
NMR spectroscopy. Proton NMR spectra of synthesized metabolites were
recorded in CDCl3 at room temperature on a Bruker DRX 500 MHz NMR
spectrometer (Bruker BioSpin GmbH, Germany) using tetramethylsilane as an
internal standard.
Synchrotron IR spectroscopy. IR Spectra were recorded through grazing
incidence angle in reflection mode on a Bruker IFS 66v/S Fourier Transform
Infrared spectrometer (FTIR) (Bruker Optics GmbH, Germany) with a
synchrotron light source. The IR spectral range was from approximately 650
cm-1 to 4000 cm-1 with a resolution of 4cm-1. A KBr beamsplitter and mid band
MCT infrared detector cooled to 77K were used. The samples were dissolved
in acetonitrile and subsequently coated on gold substrate after solvent
evaporation. Spectra of thin film of samples on gold are directly acquired in the
vacuum.
Comparative study on incubations under normoxic and hypoxic
conditions. In normoxic incubation, meisoindigo stock solution in methanol
was added to 0.1M Tris buffer (pH 7.4) with rat liver microsomes. The mixture
was first shaken for 5 min for equilibration in a shaking water bath at 37℃. The
incubation was then initiated by adding β-NADPH solution. The final
concentrations of meisoindigo, NADPH and the microsomal protein were
10μM, 1mM and 1mg/mL, respectively in a typical incubation mixture (1mL).
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The percentage of methanol in the incubation mixture was kept less than 1%
(v/v). Aliquots of 100 µL of the incubation sample mixtures were collected at 5,
15, 30 and 60 minutes and the reaction was terminated with the same volume
of ice-cold acetonitrile to precipitate proteins. Samples were subsequently
centrifuged at 14000 rpm for 15 min. 5 μL of the supernatant was taken and
analyzed by LC-MS/MS. In hypoxic incubation, meisoindigo and rat liver
microsomes were preincubated at 37℃ and bubbled with 100% nitrogen gas
(the tip of the nitrogen gas supply was submerged approximately 2 mm in the
solution) for 5 min. The incubation was then initiated by adding β-NADPH
solution. The rest of the procedures for sample collection and preparation were
the same as described above except the continuous nitrogen gas supply
throughout the study. Negative controls were prepared either by substituting
microsomal protein previously heated to 70-100℃ for 10 min or by replacing
NAPDH with water under both normoxic and hypoxic conditions.
The analysis was conducted on a Q TRAP™ 3200 MS/MS system from
Applied Biosystems / MDS Sciex (Concord, Ontario, Canada) coupled to an
Agilent 1200 HPLC system (Agilent Technologies, Palo Alto, CA, USA).
Separations were accomplished on a Luna C18 column (150 × 2.0 mm, 5 μm)
(Phenomenex, Torrance, CA, USA) with a guard cartridge at ambient
temperature. The mobile phase consisted of 0.1 % formic acid in water
(solvent A) and acetonitrile (solvent B) and was delivered at a flow rate of 0.2
mL/min. The linear gradient elution program was as follows: 30 % to 95 % B
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over 13 min, followed by an isocratic hold at 95 % B for another 7 min. At 20
min, B was returned to 30 % in 1 min and the column was equilibrated for 19
min before the next injection. The total run time for each injection was 40 min.
The mass spectrometer was operated in the positive ion mode with a
TurboIonSpray source. Two multiple reaction monitoring (MRM) transitions i.e.
277.1→234.2 and 279.1→147.1 were used to determine meisoindigo and its
metabolites at m/z 279, respectively. The declustering potential (DP) and
collision energy (CE) values were 66 V and 45 eV for meisoindigo, 61 V and 30
eV for the metabolites. The other ionization parameters were as follows:
curtain gas (CUR), 20 (arbitrary units); ion source gas 1 (GS1), 40 (arbitrary
units); ion source gas 2 (GS2), 50 (arbitrary units); source temperature (TEM),
650 �; entrance potential (EP), 10 V. The dwell time of each MRM transition
was 150 msec. The mass spectrometer and the HPLC system were controlled
by Analyst 1.4.2 software from Applied Biosystems / MDS Sciex. The relative
percentages of the components in incubations were estimated at different
incubation time points based on the integrated peak areas of MRM
chromatograms.
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Results
The proposed fragmentation scheme and product ions of protonated
meisoindigo (m/z 277) are shown in Fig. 1. It contains major product ions at
m/z 249, 234, 218, 205,190,178, 132 and 104. Loss of CO (28 Da) following
gain of one H generated the product ion at m/z 249. Loss of CONH (43 Da)
following gain of one H generated the product ion at m/z 234. Loss of CONCH3
(57 Da) following loss of one H generated the product ion at m/z 218. Loss of
both CONH and CO generated the product ion at m/z 205. Loss of both
CONCH3 and CO following loss of one H generated the product ion at m/z 190,
which was confirmed by MS/MS/MS (data not shown). Loss of both CONCH3
and CONH following gain of two H generated the product ion at m/z 178, which
was confirmed by MS/MS/MS (data not shown). Cleavage of the 3,3’ double
bond of meisoindigo following gain of one H, and subsequent loss of CO at
position 2’ following gain of one H, generated the product ions at m/z 132 and
104, respectively.
The reconstructed extracted ion chromatogram (XIC) from HPLC-QTRAP was
shown in Fig. 2. It was found that the parent drug and its metabolites were
detected as their protonated molecules. Meisoindigo was eluted at 14.99 min
and showed a molecular ion (MH+) at m/z 277. Several metabolites were
observed and eluted earlier than meisoindigo, between 7 and 13 min. Those
metabolite peaks formed corresponding to masses of m/z 279 (11.19 min,
12.37 min), m/z 265 (9.30 min, 11.87 min), m/z 295 (7.97 min, 8.86 min, 9.37
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min, 10.34 min, 11.59 min) (summarized in Table 1). From the relative peak
areas in Fig. 2, meisoindigo remained the largest component, while two peaks
corresponding to m/z 279 and one peak corresponding to m/z 295 were
regarded as the major metabolites. The chromatographic profiles of
meisoindigo and its metabolites from UPLC-QTOF showed a significant
similarity as that from HPLC-QTRAP (data not shown). Table 2 showed the
accurate masses and potential molecular formulae provided by UPLC-QTOF.
Protonated metabolites at m/z 279. Metabolites at m/z 279 had retention
times of 11.19 min and 12.37 min on the HPLC system, respectively, and
showed 2 Da increase of molecular weight compared with parent drug,
suggesting they could be direct reduction products or N-demethylation
followed by mono-oxidation products. The corresponding potential formulae of
metabolites at m/z 279 based on their accurate masses was C17H15N2O2
(Table 2), thus confirming the occurrence of direct reduction. Taking the
identical molecular formulae with different retention times into account, these
two metabolites could be isomers.
Both of the EPI (MS/MS) mass spectra on metabolites at m/z 279 of 11.19 min
and 12.37 min were identical, indicating these two metabolites should be
stereoisomers. The proposed fragmentation scheme and MS/MS spectrum of
protonated metabolites at m/z 279 are shown in Fig. 3. Loss of H2O (18 Da)
generated the product ion at m/z 261. Loss of one or two CO generated the
product ion at m/z 251 or m/z 223, which indicated that reduction had not
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occurred on either of carbonyl groups. Loss of CONH generated the product
ion at m/z 234. Cleavage of the 3,3’ bond generated the product ions at m/z
147, and m/z 133 which was 1 Da higher than the corresponding product ion of
meisoindigo at m/z 132, thus indicating the presence of 3,3’ single bond.
Subsequent loss of CO at position 2 after the cleavage of the 3,3’ bond
generated the product ions at m/z 118, which was confirmed by MS/MS/MS
(data not shown).
Since direct double bond reduction caused the generation of two chiral carbon
centers located in position 3 and 3’, four stereoisomers i.e. M1, M2, M3, M4 at
m/z 279 could exist with possible absolute configurations of (3-R, 3’-R), (3-S,
3’-S), (3-R, 3’-S), (3-S, 3’-R). Among them, M1 and M2, M3 and M4 were
assumed as enantiomers of each other respectively. In addition, M1 was
diastereomer of M3 or M4. M2 was diastereomer of M3 or M4. Considering
enantiomers generally show the same chromatographic properties with the
use of non-chiral column while diastereomers seldom do, as well as only two
peaks were displayed on the TIC or XIC, the peak with retention time of 11.19
min was postulated to be a combination of M1 and M2, whereas the other peak
with retention time of 12.37 min was postulated to be a combination of M3 and
M4.
The chromatographic behaviors of metabolites at m/z 279 on the chiral column
further confirmed this postulation. The two peaks with retention time of 11.19
min and 12.37 min on non-chiral column (Fig. 2) were split into four peaks on
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chiral column, with retention times of 18.61 min, 21.44 min, 25.24 min and
27.69 min, respectively (Fig. 4 A). Interestingly, after separation of the two
pairs of enantiomers through preparative HPLC, one pair of enantiomer
(M1+M2) corresponded the leftmost and rightmost peaks with the retention
times of 18.70 min and 27.68 min (Fig. 4 B), whereas the other pair (M3+M4)
corresponded the two peaks in the middle with the retention times of 21.33 min
and 24.96 min (Fig. 4 C), which suggesting the chiral structure difference
between M1 and M2 was larger than that between M3 and M4. Furthermore,
the isolated pair of enantiomer (M1+M2) showed two additional small peaks
happening to correspond to the other pair (M3+M4) (Fig. 4 B), while the
isolated (M3+M4) only showed two peaks (Fig. 4 C), which strongly indicated
that (M1+M2) was unstable, automatically converting to (M3+M4). Hence the
absolute configurations of (M1+M2) could be (3-R, 3’-R) and (3-S, 3’-S). Based
on each stereoisomer’s chromatographic peak areas shown in Fig. 4 A, the
reduction metabolism of meisoindigo was found to be stereoselective. One pair
of enantiomer (M3+M4) showed a higher abundance than the other pair
(M1+M2). Within both of these two pairs of enantiomers, the more polar
stereoisomer eluted first was always of higher abundance than the less polar
one (18.70 min versus 27.68 min, 21.33 min versus 24.96 min).
The hydrogenation of red meisoindigo generated colorless products in
methanol solution. Diluted products showed the same retention times and
fragmentation patterns on LC-MS/MS as the two metabolites at m/z 279 from
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microsomal sample. After isolation by preparative HPLC and solvent
evaporation, two white solids of metabolites were obtained. The proton NMR
signals of meisoindigo, M1+M2, and M3+M4 were assigned in Table 3,
respectively. The significant similarity in proton NMR signals of M1+M2 and
M3+M4 further confirmed the diastereomer relationship between them.
Compared with the chemical shift values of meisoindigo, the chemical shift
values of both M1+M2 and M3+M4 more or less shifted to relatively high field
region, due to the breakdown of long conjugation within the whole molecule
caused by the forming of 3,3’ single bond. The synchrotron infrared absorption
spectra of two isolated metabolites at m/z 279 were very similar and shown in
Fig. 8 (A). The broad band around 3200-3400 cm-1 was assigned to be NH
stretching vibration. The band around 2800-2900 cm-1 was assigned to be CH3
stretching vibration. The band around 1600 cm-1 was assigned to be C=O
stretching vibration. These characteristic absorption bands further confirmed
the presence of NH, CH3 and C=O.
Therefore, M1+M2 was tentatively identified as a pair of (3-R, 3’-R) and (3-S,
3’-S) reduced-meisoindigo enantiomers with two hydrogens located at the
same side of 3,3’-single bond, whereas M3+M4 as another pair of (3-R, 3’-S)
and (3-S, 3’-R) enantiomers with two hydrogens located at the opposite sides.
Protonated metabolites at m/z 265. Metabolites at m/z 265 had retention
times of 9.30 min and 11.87 min on the HPLC system, respectively, and
showed 12 Da decrease of molecular weight compared with parent drug,
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suggesting they could be direct reduction followed by N-demethylation
products. The corresponding potential formulae of metabolites at m/z 265
based on their accurate masses was C16H13N2O2 (Table 2), thus confirming
this postulation. Taking the identical molecular formulae with different retention
times into account, these two metabolites could be isomers.
Both of the EPI (MS/MS) mass spectra on metabolites at m/z 265 of 9.30 min
and 11.87 min were identical, indicating these two metabolites should be
stereoisomers. The proposed fragmentation scheme and MS/MS spectrum of
protonated metabolites at m/z 265 are shown in Fig. 5. Loss of H2O generated
the product ion at m/z 247, and subsequent loss of CO generated m/z 219.
Loss of one or two CO generated the product ion at m/z 237 or m/z 209, which
indicated that reduction had not occurred on either of carbonyl groups.
Cleavage of the 3,3’ bond generated the product ion at m/z 133 with the
highest abundance, indicating the forming of a symmetric molecule after
N-demethylation.
Due to the generation of two chiral carbon centers located in position 3 and 3’,
four stereoisomers i.e. M5, M6, M7, M8 at m/z 265 could exist with possible
absolute configuration of (3-R, 3’-R), (3-S, 3’-S), (3-R, 3’-S), (3-S, 3’-R).
Interestingly, reduction followed by N-demethylation led to the generation of
the same segments on the both sides of 3-3’ single bond. M5 (3-R, 3’-R), M6
(3-S, 3’-S) were enantiomers of each other so that they were combined into
one peak on the TIC or XIC with retention times of 9.30 min. However, M7 (3-R,
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3’-S), M8 (3-S, 3’-R) were actually the identical compound, due to the
presence of an internal symmetrical center at the midpoint of 3-3’ single bond.
M7 (namely M8) was a meso compound with retention times of 11.87 min.
Furthermore, M7 (M8) exhibited a higher abundance than the pair of
enantiomer (M5+M6) (Fig. 2), suggesting metabolites of m/z 265 also showed
stereoselective metabolism in this case.
Therefore, M5+M6 was tentatively identified as a pair of (3-R, 3’-R) and (3-S,
3’-S) N-demethyl-reduced-meisoindigo enantiomers with two hydrogens
located at the same side of 3,3’-single bond, whereas M7 (M8) as one meso
compound with two hydrogens located at the opposite sides.
Protonated metabolites at m/z 295. Metabolites at m/z 295 had retention
times of 7.97 min, 8.86 min, 9.37 min, 10.34 min and 11.59 min on the HPLC
system, respectively, and showed 18 Da increase of molecular weight
compared with parent drug, suggesting they could be direct reduction followed
by mono-oxidation products. The corresponding potential formulae of
metabolites at m/z 295 based on their accurate masses was C17H15N2O3
(Table 2), thus confirming this postulation. Taking the identical molecular
formulae with different retention times into account, these five metabolites
could be isomers.
There were two types of EPI (MS/MS) mass spectra on metabolites at m/z 295.
One type was the identical EPI of metabolites with retention times of 9.37 min
and 10.34 min, indicating these two metabolites should be stereoisomers. The
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proposed fragmentation scheme and MS/MS spectrum of this type are shown
in Fig. 6. Loss of H2O generated the product ion at m/z 277. Loss of CO
generated the product ion at m/z 267. Loss of CONH generated the product
ion at m/z 251. Cleavage of the 3,3’ bond generated the product ions at m/z
163 and m/z 133, of which only m/z 163 was 16 Da higher than the
corresponding product ion of reduced-meisoindigo at m/z 147, thus indicating
hydroxylation had occurred at one of the positions 4, 5, 6 and 7. Subsequent
loss of CO at position 2 after the cleavage of the 3,3’ bond generated the
product ions at m/z 134. The other type was the identical EPI of metabolites
with retention times of 7.97 min, 8.86 min and 11.59 min, indicating these three
metabolites should be stereoisomers. The proposed fragmentation scheme
and MS/MS spectrum of this type are shown in Fig. 7. Loss of both H2O and
CO generated the product ion at m/z 249. Cleavage of the 3,3’ bond generated
the product ions at m/z 147 and m/z 149, of which only m/z 149 was 16 Da
higher than the corresponding product ion of reduced-meisoindigo at m/z 133,
thus indicating hydroxylation had occurred at one of the positions 4’, 5’, 6’ and
7’.
Reduction followed by phenyl single oxidation led to two different types of
position isomers. Considering the generation of two chiral carbon centers
located in position 3 and 3’, the first type could involve M9 (3-R, 3’-R), M11
(3-S, 3’-S), M13 (3-R, 3’-S), M15 (3-S, 3’-R), with single hydroxyl group at
position 4, 5, 6 or 7. The second type could involve M10 (3-R, 3’-R), M12 (3-S,
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3’-S), M14 (3-R, 3’-S), M16 (3-S, 3’-R), with single hydroxyl group at position 4’,
5’, 6’ or 7’. For each stereoisomer, there were four maximal possibilities
regarding the specific positions of hydroxyl group on the phenyl ring. In
addition, based on chromatographic peak areas shown in Fig. 2, the first type
i.e. M9, M11, M13, M15 showed a higher abundance than the second type i.e.
M10, M12, M14, M16, which suggested that the reduction followed by
mono-oxidation metabolism of meisoindigo was regioselective.
The synchrotron IR absorption spectra of metabolites at m/z 295 isolated by
analytical HPLC were very similar. The IR spectrum of the most concentrated
one was shown in Fig. 8 (B). The intensity of broad band around 3000-3500
cm-1 relative to the band around 2800-2900 cm-1 was higher compared with Fig.
8 (A), indicating the presence of both OH and NH. The OH stretching vibration
band was also found to be broad and slightly lower than NH stretching band.
The band around 2800-2900 cm-1 was assigned to be CH3 stretching vibration.
The band around 1600 cm-1 was assigned to be C=O stretching vibration.
These characteristic absorption bands further confirmed the presence of NH,
OH, CH3 and C=O.
Therefore, M9, M11, M13, M15 were within the bounds of (3-R, 3’-R), (3-S,
3’-S), (3-R, 3’-S), (3-S, 3’-R) monohydroxyl-reduced-meisoindigo isomers with
single hydroxyl group located at position 4, 5, 6 or 7, whereas M10, M12, M14,
M16 falling within another type of isomers with single hydroxyl group located at
position 4’, 5’, 6’ or 7’.
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Incubations under normoxic and hypoxic conditions. The relative
percentages of meisoindigo and its metabolites at m/z 279 in incubations with
rat liver microsomes at various incubation time points are given in Table 4. The
results showed that the difference of relative percentages between normoxic
and hypoxic incubations was the most significant at 5 min. Approximately
95.81 % of meisoindigo, 1.92 % of M1+M2, and 2.27 % of M3+M4 were found
in the 5-min incubation of meisoindigo under normoxic conditions, whereas
66.80 % of meisoindigo, 13.12 % of M1+M2, and 20.08 % of M3+M4 were
observed in the 5-min incubation of meisoindigo under hypoxic conditions,
thus indicating the occurrence of rapid reductive metabolism of meisoindigo
(Table 4). The difference of relative percentages between normoxic and
hypoxic incubations attenuated with time, until similar relative percentages
were found in the both normoxic and hypoxic incubations at 60 min (data not
shown). As a whole, a quicker onset of the metabolism under hypoxic
conditions was obtained as compared to that under normoxic conditions,
suggesting oxygen exposure strongly inhibits the in vitro reductive metabolism
of meisoindigo in rat liver microsomes.
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Discussion
This is the first investigation of the in vitro stereoisomeric metabolites of
meisoindigo in rat liver microsomes, by achiral and chiral LC-MS/MS, as well
as other relevant techniques. In the present study, rat liver microsomes were
chosen because rats express two major cytochrome P450 isoforms that are
oligomerically related to human CYP3A4, CYP3A1 and CYP3A2 (Nelson et al.,
1996). Besides, rat liver microsomes are readily available though simple
preparation. Although the metabolism study in human liver microsomes is not
involved yet in this study, the relevant results obtained showed a qualitative
similarity in metabolite profiles of meisoindigo between rat liver microsomes
and human liver microsomes (data not shown). In addition, the metabolite
profile of meisoindigo in rat liver microsomes is more comprehensive than that
in human liver microsomes (data not shown). Thus the findings regarding
metabolite profile in rat liver microsomes are of considerable importance.
The abundance of the minor metabolites is generally very low, especially in
incubation with low substrate concentration, but is increased relative to other
metabolites at higher substrate concentrations. Considering the typical
concentration range (10-50 μM) in metabolite identification experiments (Chen
et al., 2007), the upper limit concentration, i.e. 50 μM, was adopted.
Furthermore, minimal sample cleanup was performed, because the nature,
number, and concentrations of metabolites present were unknown, and it was
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therefore impossible to determine if any would be lost during sample
preparation (Clarke et al. 2001).
On the basis of molecular masses, fragmentation patterns, as well as potential
formulae of the metabolites and meisoindigo, three metabolic pathways of
meisoindigo in male rat liver microsomes were proposed as direct 3,3’ double
bond reduction, reduction followed by N-demethylation, as well as reduction
followed by phenyl mono-oxidation (Fig. 9). Among them, direct 3,3’ double
bond reduction was one-step reaction and thus the predominant pathway. The
other two parallel metabolic pathways were two-step reactions and thus
secondary pathways. Interestingly, the first two metabolic pathways of
meisoindigo were found to be stereoselective, while the third one was both
stereoselective and regioselective. In the cases of either M3+M4 versus
M1+M2 or M7(M8) versus M5+M6, the pair of (3-R, 3’-S) and (3-S, 3’-R)
enantiomer with two hydrogens located at the opposite sides showed a much
higher abundance than the other pair of (3-R, 3’-R) and (3-S, 3’-S) enantiomer
with two hydrogens located at the same sides.
Proton NMR spectroscopy nuclear Overhauser effect (NOE) experiments were
conducted to explore the NOE signal difference caused by distinct spatial
distance between 3H and 3’H within the two pairs of synthetic enantiomers,
namely M1+M2 and M3+M4. However, the results showed that there was no
significant difference in the NOE spectra between synthetic M1+M2 and
M3+M4, when 3H and 3’H were irradiated, respectively (data not shown).
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Other methods such as optical rotary dispersion (ORD), circular dichroism (CD)
or X-ray crystallography could be conducted to confirm the assignment of the
absolute configurations of M1+M2 and M3+M4. However, further investigation
on the specific absolute configurations of four stereoisomers i.e. M1, M2, M3,
M4 could be very challenging due to the rapid enantiomer interconversion
between M1 and M2, M3 and M4.
In terms of chiral chromatography analysis, a good separation of metabolite
stereoisomers could not be achieved through gradient elution mobile phase,
which is typically used for achiral chromatography analysis. Isocratic mobile
phase was finally adopted to successfully separate the two pairs of
enantiomers at m/z 279 simultaneously on a Daicel Chiralcel OD-R column.
But this chiral column didn’t work well on the separation of stereoisomeric
metabolites at m/z 265 and m/z 295, probably owing to their relatively low
quantity. Another possible reason might be the specific packing material of
Chiralcel OD-R column was only suitable for the chiral separation of
stereoisomeric metabolites at m/z 279 rather than the other two. In this case,
other different types of chiral columns could be considered.
Although the chromatographic peak at m/z 295 with retention time of 9.37 min
was regarded as the major metabolite, another peak of the pair of enantiomers
(M5+M6) with retention time of 9.30 min was almost co-eluted with it (Fig. 2).
More sensitive scan type multiple reactions monitoring (MRM) couple with
UPLC showed that this peak at 9.37 min in Fig. 2 was actually more than one
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component and combined with three individual peaks showing m/z 295 (data
not shown). Due to the chromatographic complexity and trace amount of these
minor metabolites, microsomal incubation samples had been directly tried on
the online LC-NMR 600 MHz equipped with a cryoprobe from Bruker BioSpin.
Unfortunately, injection volume was limited by the bulk concentration of
microsomal matrix contaminants in the first 5 minutes, which thus diluted the
eluted components entering into the NMR detection region. Analytical HPLC
was subsequently tried to isolate and accumulate the minor metabolites at m/z
295 and m/z 265 for further characterization by 1.7 mm Micro-CryoProbe NMR
600 MHz from Bruker BioSpin. However, the accumulated quantity was still
unable to meet the minimal requirement of this special NMR measurement
with the lowest detection of limit at present. Therefore, chemical synthesis has
to be the last resort. Further work would be needed to synthesize the possible
minor metabolites and isolate the stereoisomers by chiral chromatography
followed by NMR structural characterization. In particular, the specific position
of OH group in stereoisomeric monohydroxyl-reduced-meisoindigo is a vital
aspect to be investigated. Since both NCH3 at position 8 and NH at position 8’
donate electrons into the two phenyl ring systems, the highest electron density
should be located at ortho positions (i.e. 7 or 7’) and para positions (i.e. 5 or 5’).
In view of the offset by steric hindrance of OH group at ortho positions, it could
be predicted that para positions (i.e. 5 or 5’) would be thus the most reactive
towards perferryl oxygen complex [FeO]3+ from the perspective of CYP450
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oxidation mechanism.
Considering synchrotron IR spectroscopy provided a much greater detection of
limit than conventional IR technique due to the high brightness of synchrotron
IR source, it was employed for the first time to further confirm the structures of
metabolite within mg level after isolation and accumulation by analytical HPLC.
The IR measurement was performed in the vacuum to remove the signals
caused by H2O and CO2 from the air as much as possible, thus achieving a
satisfactory signal to noise ratio. It should be noted that synchrotron IR is only
applicable for those limited instances, in which the structural difference
between metabolite and parent drug is due to characteristic IR functional
groups, such as hydroxyl group, carbonyl group, amino group etc. Hence,
synchrotron IR can only be a supplementary tool to conventional structural
identification approaches, i.e., MS and NMR.
The comparative metabolite profiling using rat liver microsomes in the
normoxic and hypoxic incubations further confirmed the occurrence of
reductive metabolism of meisoindigo. Based on a report on the reductive
metabolism of meisoindigo analogues (Kohno et al., 2005), it is possible to
speculate that NADPH-cytochrome P450 reductase (P450R) in rat liver
microsomes could be the enzyme responsible for the initiation of reductive
activation of meisoindigo through the formation of a superoxide radical by
transferring one electron from the electron donor i.e. NADPH. This proposed
mechanism can be confirmed by investigating the metabolism of meisoindigo
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after incubation with purified recombinant P450R in the presence of NADPH.
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Acknowledgements. We thank Dr Mohammed Bahou, from Singapore
Synchrotron Light Source, National University of Singapore, for his kind
assistance with synchrotron IR experiments.
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Legends for Figures
FIG. 1. MS/MS spectrum of protonated meisoindigo at m/z 277 and the
proposed origin of key product ions.
FIG. 2. Reconstructed extract ion chromatogram for meisoindigo and its
metabolites in rat liver microsomes.
FIG. 3. MS/MS spectrum of protonated M1+M2, M3+M4 at m/z 279 and the
proposed origin of key product ions.
FIG. 4. Extracted ion chromatograms on the chiral column corresponding to
M1+M2+M3+M4 (A), M1+M2 (B) and M3+M4 (C) at m/z 279.
FIG. 5. MS/MS spectrum of protonated M5+M6, M7(M8) at m/z 265 and the
proposed origin of key product ions.
FIG. 6. MS/MS spectrum of protonated M9,M11,M13,M15 at m/z 295 and the
proposed origin of key product ions.
FIG. 7. MS/MS spectrum of protonated M10,M12,M14,M16 at m/z 295 and the
proposed origin of key product ions.
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FIG. 8. Infrared absorption spectra of mesoindigo metabolites at m/z 279 (A)
and m/z 295 (B).
FIG. 9. Proposed metabolic pathway of meisoindigo in rat liver microsomes.
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Tables
TABLE 1 HPLC-QTAP retention times and mass spectra properties for
meisoindigo and its in vitro metabolites
Retention time
(min) MH+ m/z of major product ions
meisoindigo 14.99 277 249,234,218,205,190,178,165,132,104
M1+M2 11.19 279 261,251,234,223,147,133,118
M3+M4 12.37
M5+M6 9.30 265 247,237,219,209,133
M7(M8) 11.87
M9,M11,M13,M15 9.37, 10.34 295
277,267,251,163,134,133
M10,M12,M14,M16 7.97, 8.86, 11.59 277,267,249,158,149,147
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TABLE 2 UPLC-QTOF retention times, potential formula and accurate masses for
meisoindigo and its in vitro metabolites
Retention time (min)
Molecular
Formula
(1+)
m/z (1+) Del M (Da) Measured m/z (1+)
PPM
meisoindigo 3.42 C17H13N2O2 277.0977 -0.0001 277.0976 -0.4
M1+M2 2.07 C17H15N2O2 279.1134
2.0162 279.1139 1.8
M3+M4 2.43 2.0153 279.1130 -1.4
M5+M6 1.65 C16H13N2O2 265.0977
-12.0005 265.0972 -1.9
M7(M8) 2.26 -11.9996 265.0981 1.5
M9,M11,M13,M15 1.66
C17H15N2O3 295.1083
18.0104 295.1081 -0.7
1.74 18.0111 295.1088 1.7
M10,M12,M14,M16
1.45 18.0111 295.1088 1.7
1.56 18.0113 295.1090 2.4
2.17 18.0101 295.1078 -1.7
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TABLE 3 1H-NMR data for meisoindigo, M1+M2, and M3+M4
Position Meisoindigo M1+M2 M3+M4
4 9.13 (1H, d, 8.0Hz) 7.26 (1H, t, 8.0Hz) 7.23 (1H, t, 8.0Hz)
5 7.08 (1H, m) 6.98 (1H, m) 6.95 (1H, m)
6 7.38 (1H, t, 7.5Hz) 7.15 (1H, m) 7.12 (1H, m)
7 6.79 (1H, m) 6.74 (1H, m) 6.72 (1H, m)
4’ 9.20 (1H, d, 8.0Hz) 7.33 (1H, t, 8.0Hz) 7.30 (1H, t, 8.0Hz)
5’ 7.05 (1H, m) 6.95 (1H, m) 6.92 (1H, m)
6’ 7.32 (1H, t, 7.5Hz) 7.08 (1H, t, 8.0Hz) 7.05 (1H, t, 8.0Hz)
7’ 6.81 (1H, m) 6.81 (1H, t, 8.5Hz) 6.78 (1H, m)
NCH3 3.30 (3H, s) 3.17 (3H, s) 3.14 (3H, s)
NH 7.81 (1H, br.s) 7.58 (1H, br.s) 7.48 (1H, br.s)
3 ⎯ 4.23 (1H, dd, 3.5Hz,
24.0Hz)
4.20 (1H, dd, 3.5Hz,
24.0Hz)
3’ ⎯ 4.32 (1H, dd, 3.5Hz,
26.0Hz)
4.30 (1H, dd, 3.5Hz,
27.0Hz)
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TABLE 4 Relative percentages of identified components in incubations of
meisoindigo with rat liver microsomes under normoxic and hypoxic conditions
Time
(min)
Normoxic (%) Hypoxic (%)
Meisoindigo M1+M2 M3+M4 Meisoindigo M1+M2 M3+M4
5 95.81 1.92 2.27 66.80 13.12 20.08
15 60.24 15.54 24.23 42.18 21.99 35.83
30 48.30 22.54 29.16 33.48 26.64 39.88
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