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This file is part of the following reference: de Nys, Rocky (1991) Natural products chemistry and chemical ecology of tropical marine algae. PhD thesis, James Cook University. Access to this file is available from: http://eprints.jcu.edu.au/16979

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Page 1: de Nys, Rocky (1991) Natural products chemistry and ...researchonline.jcu.edu.au/16979/1/01front.pdf · ECOLOGY OF TROPICAL MARINE ALGAE A thesis submitted by Rocky de Nys BSc (Waikato),

This file is part of the following reference:

de Nys, Rocky (1991) Natural products chemistry and chemical ecology of tropical marine algae.

PhD thesis, James Cook University.

Access to this file is available from:

http://eprints.jcu.edu.au/16979

Page 2: de Nys, Rocky (1991) Natural products chemistry and ...researchonline.jcu.edu.au/16979/1/01front.pdf · ECOLOGY OF TROPICAL MARINE ALGAE A thesis submitted by Rocky de Nys BSc (Waikato),

NATURAL PRODUCTS CHEMISTRY AND CHEMICAL

ECOLOGY OF TROPICAL MARINE ALGAE

A thesis submitted by

Rocky de Nys BSc (Waikato), MSc (Otago)

in August 1991

for the degree of

Doctor of Philosophy

in the

Department of Chemistry and Biochemistry

and the

Department of Botany

at

James Cook University of North Queensland

Page 3: de Nys, Rocky (1991) Natural products chemistry and ...researchonline.jcu.edu.au/16979/1/01front.pdf · ECOLOGY OF TROPICAL MARINE ALGAE A thesis submitted by Rocky de Nys BSc (Waikato),

STATEMENT OF ACCESS

I, the undersigned author of this work, understand that James Cook University will make this thesis available for use within the University Library and, via the Australian Digital Theses network, for use elsewhere. I understand that, as an unpublished work, a thesis has significant protection under the Copyright Act and; I do not wish to place any further restriction on access to this work

_____________________________________ ______________ Signature Date

Page 4: de Nys, Rocky (1991) Natural products chemistry and ...researchonline.jcu.edu.au/16979/1/01front.pdf · ECOLOGY OF TROPICAL MARINE ALGAE A thesis submitted by Rocky de Nys BSc (Waikato),

STATEMENT ON SOURCES

Declaration

I declare that this thesis is my own work and has not been submitted in any form for another degree or diploma at any university or other institution of tertiary education. Information derived from the published or unpublished work of others has been acknowledged in the text and a list of references is given. …………………………………………….. ……………………… (Signature) (Date)

Page 5: de Nys, Rocky (1991) Natural products chemistry and ...researchonline.jcu.edu.au/16979/1/01front.pdf · ECOLOGY OF TROPICAL MARINE ALGAE A thesis submitted by Rocky de Nys BSc (Waikato),

Acknowledgements

I would like to thank Professor John C. CoIl and Associate Professor

Ian R. Price for their supervision, advice and good humour

throughout the course of this work. Thanks are also extend to Drs

Bruce F. Bowden, Anthony R. Carroll and Anthony D. Wright for

assistance with the natural products chemistry section of this thesis;

Dr Peter D. Steinberg for assistance and support with the ecology

section of this thesis; Dr John K. MacLeod of the Research School of

Chemistry (A.N.U.) for providing extensive mass spectral data, and

Dr Porfirio Alino and Mauro Maida for assistance with field studies

and statistical analyses. The Australian Research Council, James

Cook University of North Queensland and the Great Barrier Reef

Marine Park Authority are acknowledged for their financial

support. The Australian Postgraduate Research Awards Committee

are thanked for the granting of a Postgraduate Research Award.

Page 6: de Nys, Rocky (1991) Natural products chemistry and ...researchonline.jcu.edu.au/16979/1/01front.pdf · ECOLOGY OF TROPICAL MARINE ALGAE A thesis submitted by Rocky de Nys BSc (Waikato),

Abstract

This thesis reports results from an investigation of the natural

product chemistry and chemical ecology of tropical marine algae.

The research has led to the discovery of novel metabolites in a

number of algal species and demonstrated the ecological role of

selected isolated metabolites.

Chapter one provides a general overview of the roles of secondary

metabolites in the marine algae, including a review of all algal

secondary metabolites previously investigated for their role in

ecological interactions.

The algal Division Rhodophyta proved to be a rich source of

secondary metabolites. Chapter two describes the structural

elucidation of novel metabolites from the algae Laurencia

mariannensis, L. majuscula, Dasyphila plumerioides and Delisea

pulchra using chemical manipulations and high field nuclear

magnetic resonance spectroscopy. The presence of previously

reported metabolites, a number of which have now been fully

characterised or reassigned, is also described.

The algal Divisions Chlorophyta, Phaeophyta and Cyanophyta

proved to be less chemically rich than the Rhodophyta yielding only

previously reported metabolites. Chapters three to five describe

chemical investigations of the Chlorophyta Microdictyon obscurum

and Chlorodesmis jastigata, the Phaeophyta Sargassum spp., and the

Cyanophyta Lyngbya sp.

Page 7: de Nys, Rocky (1991) Natural products chemistry and ...researchonline.jcu.edu.au/16979/1/01front.pdf · ECOLOGY OF TROPICAL MARINE ALGAE A thesis submitted by Rocky de Nys BSc (Waikato),

An opportunistic investigation of the natural product chemistry of

the blue coral H eliopora coerulea (Alcyonacea) yielded interesting

secondary metabolites of potential ecological significance. Chapter

six describes the elucidation of novel metabolites from H. coerulea.

The ecological role of selected algal metabolites is described in the

latter part of the thesis. Chapter seven treats the chemically

mediated interaction between the red alga P locamium hamatum

and the alcyonacean soft coral Sinularia cruciata. Experimental

studies have shown that the algal secondary metabolite

chloromertensene plays a major role in allelopathic interactions

with S. cruciata. The importance of natural irradiance levels on the

distribution of the alga and its possible influence on the selection of

secondary metabolites with allelopathic function is also discussed.

Chapter eight identifies the chemical defences of the temperate red

alga Delisea pulchra against common herbivores. In situ feeding

experiments were carried out to determine the deterrent effect of

purified metabolites isolated from the alga on selected herbivore

species.

Page 8: de Nys, Rocky (1991) Natural products chemistry and ...researchonline.jcu.edu.au/16979/1/01front.pdf · ECOLOGY OF TROPICAL MARINE ALGAE A thesis submitted by Rocky de Nys BSc (Waikato),

Foreword

This thesis is presented in nine chapters. Chapter 1 IS a general

introduction to the natural products chemistry and chemical ecology

of marine algae. The following chapters are divided into two major

sections, the first on the isolation and structural elucidation of

secondary metabolites from tropical marine algae (Chapters 2, 3, 4,

5) and a soft coral species (Chapter 6); and the second on chemical

ecology studies of secondary metabolites isolated from tropical and

temperate algae (Chapters 7 and 8). The final chapter (Chapter 9)

contains the experimental data associated with the natural products

chemistry section of this thesis.

Due to the combining of both chemical and ecological studies in this

thesis, a composite literature referencing system has been adopted.

This is designed to allow chemically and ecologically directed

readers eaSIer access to information referenced in this thesis. All

information is referenced in the text in biological format (e.g. Bakus

et ai. 1986), and in the reference section in alphabetical order.

However, for convenience all references of a chemical nature are

presented in the format adopted by the journal, Australian Journal

of Chemistry, while all those of a biological nature are presented in

the format adopted by the journal, Marine Biology.

Page 9: de Nys, Rocky (1991) Natural products chemistry and ...researchonline.jcu.edu.au/16979/1/01front.pdf · ECOLOGY OF TROPICAL MARINE ALGAE A thesis submitted by Rocky de Nys BSc (Waikato),

TABLE OF CONTENTS

Page

Chapter 1. Introduction 1

1.1 Marine Natural Products Chemistry:

Algal Secondary Metabolites 5

1.2. Marine Chemical Ecology:

1.2.1. Chemically Mediated Algal Interactions 8

1.2.1.1. Chemical Defences 9

1.2.1.2. Antifouling 10

1.2.1.3. Allelopathy 11

1.2.1.4. Chemotaxis 13

1.2.2. Other Roles of Secondary Metabolites 14

1.2.2.1. Plant Growth Regulators 14

1.2.2.2. Phagostimulants 15

1.2.2.3. Induction of Larval Settlement 15

and Metamorphosis

1.2.2.4. Secondary Metabolites as Taxonomic 16

Indicators (Chemotaxonomy)

1.2.3. Objectives of the Thesis 18

Chapter 2. Investigation of the Natural Products

Chemistry of Selected Rhodophyta

(Red Algae) 28

2.1. Laurencia spp. 28

2.1.1. Laurencia .-n.

mariarynsis 28

2.1.2. Laurencia majuscula 36

2.2. Dasyphila plumariodes 55

2.3. Delisea pulchra 64

Page 10: de Nys, Rocky (1991) Natural products chemistry and ...researchonline.jcu.edu.au/16979/1/01front.pdf · ECOLOGY OF TROPICAL MARINE ALGAE A thesis submitted by Rocky de Nys BSc (Waikato),

Chapter 3.

3.1.

3.2.

Chapter 4.

4.1.

Chapter 5.

5.1.

Chapter 6.

6.1.

Chapter 7.

7.l.

7.2.

7.2.l.

7.2.2.

7.2.3.

Investigation of the Natural Products

Chemistry of Selected Chlorophyta

(Green Algae)

Microdictyon obscurum

Chlorodesmis !astigata

Investigation of the Natural Products

Chemistry of Selected Phaeophyta

(Brown Algae)

Sargassum spp.

Investigation of the Natural Products

Chemistry of Selected Cyanophyta

(Blue-Green Algae)

Lyngbya sp.

Investigation of the Natural Products

Chemistry of the octocoral H eliopora

coerulea (Alcyonaria)

Heliopora coerulea

Chemically Mediated Interactions of

the Red Alga Plocamium hamatum

Introduction

Methods

Study Site and Organisms

Chemical Procedures

Field Observations of Interactions

73

73

73

75

75

77

77

78

78

90

90

91

91

92

92

Page 11: de Nys, Rocky (1991) Natural products chemistry and ...researchonline.jcu.edu.au/16979/1/01front.pdf · ECOLOGY OF TROPICAL MARINE ALGAE A thesis submitted by Rocky de Nys BSc (Waikato),

Chapter

7.2.4. Mani pulati ve Experimen ts

7.2.4.1. Effects of Plocamium hamatum on

Sinularia cruciata

92

92

7.2.4.2. Effects of Chloromertensene on Sinularia 93

cru cia ta

7.2.5. The Relationship between Irradiance Levels 94

and the Distribution of Plocamium hamatum

7.2.5.1. Transect Studies

7.2.5.2. Effects of Light on Algal Distribution

7.2.6.

7.3.

7.3.1.

7.3.2.

Pharmacological Testing

Results

General Field Observations of Interactions

Manipulative Experiments

94

94

95

96

96

96

7.3.2.1. Effects of Plocamium hamatum on Sinularia 96

cruciata

7.3.2.2. Effects of Chloromertensene on Sinularia 97

cruciata

7.3.3. The Relationship between Irradiance Levels 99

and the Distribution of Plocamium hamatum

7.3.3.1. Transect Results

7.3.3.2. Light Measurements

7.3.4. Pharmacological Testing

7.4. Discussion

8. Chemical Defences of the Temperate Red

Alga Delisea pulchra

8.1. Introduction

8.2. Methods

8.2.1. Study Site and Organisms

99

101

103

103

110

110

111

111

Page 12: de Nys, Rocky (1991) Natural products chemistry and ...researchonline.jcu.edu.au/16979/1/01front.pdf · ECOLOGY OF TROPICAL MARINE ALGAE A thesis submitted by Rocky de Nys BSc (Waikato),

8.2.2. Chemical Procedures 112

8.2.3. Feeding deterrence bioassays 112

8.3. Results 115

8.3.1. Feeding deterrence: Tripneustes gratilla 115

8.3.2. Feeding deterrence: Turbo undulata 115

8.4. Discussion 117

Chapter 9. Experimental 124

9.1. Abbreviations 124

9.2. General Procedures 125

9.2.1. Sample Collection and Extraction 125

9.2.2. Solvents 125

9.2.3. Chromatography 126

9.2.3.1. Column Chromatography 126

9.2.3.2. High Performance Liquid Chromatography 126

9.2.3.3. Thin Layer Chromatography 126

9.3. Instrumentation 127

9.3.1. Mass Spectrometry (m.s.) 127

9.3.2. Infra-red Spectroscopy (i.r.) 127

9.3.3. Ultraviolet Spectroscopy (u.v.) 127

9.3.4. 1 H Nuclear Magnetic Resonance 128

Spectroscopy (n.m.r.)

9.3.5. 13C Nuclear Magnetic Resonance 128

Spectroscopy (n.m.r.)

9.3.6. Two Dimensional Nuclear Magnetic 128

Resonance Spectroscopy (2D n.m.r.)

9.3.7. Nuclear Overhauser Effect (n.O.e.) 130

Spectroscopy

9.3.8. Optical Rotation ([a]n) Determinations 130

Page 13: de Nys, Rocky (1991) Natural products chemistry and ...researchonline.jcu.edu.au/16979/1/01front.pdf · ECOLOGY OF TROPICAL MARINE ALGAE A thesis submitted by Rocky de Nys BSc (Waikato),

9.3.9.

9.4.

9.4.1.

9.4.2.

9.4.3.

9.4.4.

9.5.

9.5.1.

9.5.2.

9.6.

9.6.1.

9.7.

9.7.1.

9.8.

Melting points (mp) Determinations

Rhodophyta

Laurencia mariannensis (MI871F)

Laurencia majuscula (MI884E)

Dasyphila plumarioides (HR89II)

Delisea pulchra (SY891A)

Chlorophyta

Microdictyon obscurum (HR892A, 2J)

Chlorodesmis !astigata (JB871 A)

Phaeophyta

Sargassum sp. cf. linearifolium

Cyanophyta

Lyngbya sp.

Heliopora coerulea

(BR891A)

References

Appendix I

130

131

131

134

144

146

153

153

153

155

155

156

156

157

164