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© 2010 Nature America, Inc. All rights reserved. COMMENTARY Collaborative genomics for human health and cooperation in the Mediterranean region Tayfun Özçelik, Moien Kanaan, Karen B Avraham, Drakoulis Yannoukakos, André Mégarbané, Ghazi O Tadmouri, Lefkos Middleton, Giovanni Romeo, Mary-Claire King & Ephrat Levy-Lahad The US government has proposed the development of scientific centers of excellence to solve global challenges. We propose such a center of excellence devoted to the genomic analysis of Mediterranean populations of all creeds. This genomic focus is rooted in the region’s demographic history, builds on the area’s rapidly developing expertise in human genetics, and will yield scientific discoveries of both local and global significance. The genome sequence data of Mediterranean populations will offer unique insights into human evolution and early human migration. The potent combination of highly consanguineous populations in the Mediterranean’s southern and eastern rims and regional medical and scientific expertise could lead to the identification and characterization of many genes responsible for human disease. Such discoveries will enable genetic knowledge to be translated into medical knowledge that will benefit local populations and contribute substantially to the understanding of the genetic bases of human diseases worldwide. In Cairo in June 2009, US President Obama spoke of the importance of international col- laboration for scientific and technological development 1 . This speech was followed by fact-finding visits by American Science Envoys to the Middle East, North Africa, Europe, and South and Southeast Asia 2 . Shared genes and shared cultures are key factors that unite people. As a group of Mediterranean geneticists committed to addressing local genetic issues and to borderless global scientific collaboration 3 , we welcome the US initiative. We propose that human genomics is an excellent common resource for addressing common challenges and for deepening existing scientific relationships in the Mediterranean basin across all countries and populations. In this commentary, following discussions held during the Mediterranean Medical Genetics Meeting (MediMedGen) at Bilkent University in Ankara in June 2009, we propose a genom- ics initiative consisting of collaborative studies in human genomics that can provide a solid foundation to the American Science Envoys Program, with practical benefit to people in the region and worldwide. A vision for Mediterranean collaboration in human genomics Sequencing the human genome generated a landmark scientific resource that provides a common platform for biomedical research. To realize the promise of genomic medi- cine will require further advances on several fronts, including reductions in sequencing and data analysis costs to enable many more individual sequences to be generated, more complete annotation of the human genome Tayfun Özçelik is at the Department of Molecular Biology and Genetics, Faculty of Science & Institute of Materials Science and Nanotechnology (UNAM), Bilkent University, Ankara, Turkey. Moien Kanaan is at the Department of Life Sciences, Bethlehem University, Bethlehem, Palestine. Karen B. Avraham is at the Department of Human Molecular Genetics and Biochemistry, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel. Drakoulis Yannoukakos is at the Molecular Diagnostics Laboratory, IRRP, National Centre for Scientific Research ‘Demokritos’, Aghia Paraskevi, Athens, Greece. André Mégarbané is at the Unité de Génétique Médicale, and the INSERM, Laboratoire International Associé à l’UMR_S 910, Faculté de Médecine, Université Saint-Joseph, Beirut, Lebanon. Ghazi O. Tadmouri is at the Centre for Arab Genomic Studies, Dubai, United Arab Emirates. Lefkos Middleton is at the School of Public Health, Imperial College, London, UK. Giovanni Romeo, President of the European Genetics Foundation, is at the Unità di Genetica Medica, Policlinico Universitario S. Orsola-Malpighi, Bologna, Italy. Mary-Claire King is at the Department of Genome Sciences, University of Washington School of Medicine, Seattle, Washington, USA. Ephrat Levy-Lahad is at the Medical Genetics Institute, Shaare Zedek Medical Center, Jerusalem, Israel. Correspondence to T.Ö. ([email protected]) or E.L.-L. ([email protected]). sequence, the creation of additional compu- tational tools and databases, the translation of human genomic research into clinical prac- tice, the delivery of services through national health systems, the development and training of a skilled workforce, and consideration of the ethical, social and legal issues that accom- pany these innovations 4 . Although local issues exist, these challenges are global. The human genomics initiative for the Mediterranean region that is proposed here makes a unique contribution to science and medicine because it takes advantage of the specific strengths and characteristics of the region’s population and undertakes an inte- grated approach, using both whole-genome sequencing of Mediterranean individuals and family-based studies to identify genes for spe- cific diseases. NATURE GENETICS | VOLUME 42 | NUMBER 8 | AUGUST 2010 641

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Collaborative genomics for human health and cooperation in the Mediterranean regionTayfun Özçelik, Moien Kanaan, Karen B Avraham, Drakoulis Yannoukakos, André Mégarbané, Ghazi O Tadmouri, Lefkos Middleton, Giovanni Romeo, Mary-Claire King & Ephrat Levy-Lahad

the US government has proposed the development of scientific centers of excellence to solve global challenges. We propose such a center of excellence devoted to the genomic analysis of mediterranean populations of all creeds. this genomic focus is rooted in the region’s demographic history, builds on the area’s rapidly developing expertise in human genetics, and will yield scientific discoveries of both local and global significance. the genome sequence data of mediterranean populations will offer unique insights into human evolution and early human migration. the potent combination of highly consanguineous populations in the mediterranean’s southern and eastern rims and regional medical and scientific expertise could lead to the identification and characterization of many genes responsible for human disease. Such discoveries will enable genetic knowledge to be translated into medical knowledge that will benefit local populations and contribute substantially to the understanding of the genetic bases of human diseases worldwide.

In Cairo in June 2009, US President Obama spoke of the importance of international col-laboration for scientific and technological development1. This speech was followed by fact-finding visits by American Science Envoys to the Middle East, North Africa, Europe, and South and Southeast Asia2.

Shared genes and shared cultures are key factors that unite people. As a group of Mediterranean geneticists committed to addressing local genetic issues and to borderless global scientific collaboration3, we welcome the US initiative. We propose that human genomics is an excellent common resource for addressing common challenges and for deepening existing scientific relationships in the Mediterranean basin across all countries and populations.

In this commentary, following discussions held during the Mediterranean Medical Genetics

Meeting (MediMedGen) at Bilkent University in Ankara in June 2009, we propose a genom-ics initiative consisting of collaborative studies in human genomics that can provide a solid foundation to the American Science Envoys Program, with practical benefit to people in the region and worldwide.

A vision for Mediterranean collaboration in human genomicsSequencing the human genome generated a landmark scientific resource that provides a common platform for biomedical research. To realize the promise of genomic medi-cine will require further advances on several fronts, including reductions in sequencing and data analysis costs to enable many more individual sequences to be generated, more complete annotation of the human genome

Tayfun Özçelik is at the Department of Molecular Biology and Genetics, Faculty of Science & Institute of Materials Science and Nanotechnology (UNAM), Bilkent University, Ankara, Turkey. Moien Kanaan is at the Department of Life Sciences, Bethlehem University, Bethlehem, Palestine. Karen B. Avraham is at the Department of Human Molecular Genetics and Biochemistry, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel. Drakoulis Yannoukakos is at the Molecular Diagnostics Laboratory, IRRP, National Centre for Scientific Research ‘Demokritos’, Aghia Paraskevi, Athens, Greece. André Mégarbané is at the Unité de Génétique Médicale, and the INSERM, Laboratoire International Associé à l’UMR_S 910, Faculté de Médecine, Université Saint-Joseph, Beirut, Lebanon. Ghazi O. Tadmouri is at the Centre for Arab Genomic Studies, Dubai, United Arab Emirates. Lefkos Middleton is at the School of Public Health, Imperial College, London, UK. Giovanni Romeo, President of the European Genetics Foundation, is at the Unità di Genetica Medica, Policlinico Universitario S. Orsola-Malpighi, Bologna, Italy. Mary-Claire King is at the Department of Genome Sciences, University of Washington School of Medicine, Seattle, Washington, USA. Ephrat Levy-Lahad is at the Medical Genetics Institute, Shaare Zedek Medical Center, Jerusalem, Israel. Correspondence to T.Ö. ([email protected]) or E.L.-L. ([email protected]).

sequence, the creation of additional compu-tational tools and databases, the translation of human genomic research into clinical prac-tice, the delivery of services through national health systems, the development and training of a skilled workforce, and consideration of the ethical, social and legal issues that accom-pany these innovations4.

Although local issues exist, these challenges are global. The human genomics initiative for the Mediterranean region that is proposed here makes a unique contribution to science and medicine because it takes advantage of the specific strengths and characteristics of the region’s population and undertakes an inte-grated approach, using both whole-genome sequencing of Mediterranean individuals and family-based studies to identify genes for spe-cific diseases.

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Whole genome sequencing in Mediterranean individualsWhole genome sequencing of individuals from the Mediterranean basin has not yet been performed, even though the region was one of the first stations of human migration out of Africa. Indeed, Mediterranean individuals have exerted both genetic and cultural influ-ence well beyond their ancestral home. The complete genome sequences reported so far have been for individuals of ancestries from Northwest Europe, China, Korea and sub-Saharan Africa. Although the international 1,000 Genomes Project will create a more detailed picture of human genetic variation (http://www.1000genomes.org/page.php), whole-genome sequencing of individuals from Mediterranean populations will reveal new information on human evolution, migra-tion and diversity.

Sequencing a sufficient number of rep-resentative Mediterranean individuals will provide a reference and scaffold for fur-ther genetic studies in the region. As rapid advances in DNA sequencing technology have led to marked reductions in cost as well as profound improvements in efficiency over the last decade, there are now many sequenc-ing centers worldwide, including in the Mediterranean basin. This capacity could be further developed and exploited to contribute to the understanding of human genetic varia-tion in a concerted fashion. It would be feasible to generate a comprehensive Mediterranean catalog of single nucleotide and small inser-tion-deletion polymorphisms and copy num-ber variations, with corresponding allele and haplotype frequencies and linkage disequilib-rium patterns. Performing such studies locally will lead the regional community into the next stage of genomic studies. To ensure free and open access to the data generated, a virtual database, Genotheca Mediterranea, could be established.

It has become increasingly difficult to define mutations as causative as the extent of human variation has been revealed. There is a renewed realization that one means of addressing this complexity is by linking func-tional mutations with specific phenotypes, a link that is highlighted, often in stark relief, by recessive diseases. Although in most pop-ulations recessive deleterious mutations will never be fully expressed, such mutations and their effects become clearly evident in con-sanguineous populations, where individuals homozygous for a deleterious trait are signifi-cantly more common. In this respect, studies in Mediterranean populations can provide a new genotype-phenotype map of the human genome.

Consanguinity and disease gene identification in Mediterranean populationsThe southern and eastern rims of the Mediterranean basin have among the high-est levels of consanguinity in the world, comprising part of a region of consanguin-ity that extends from the southern shores of the Mediterranean Sea through the Middle East, Mesopotamia, the Gulf and the Indian subcontinent to Southeast Asia. The roots of consanguinity in Mediterranean populations date to ancient times5, reflecting both historical and contemporary social preferences for mar-riages between relatives. The social and cultural advantages of this practice include mainte-nance of family structure and property, and financial advantages relating to dowry. Better relations with in-laws, and the perception that consanguineous marriages might be more stable than marriages between non-relatives, are also important. At present, in many areas of the region ~25% of marriages are between first cousins. True rates of consanguinity are even higher because there is additional endogamy (that is, marriage within the extended clan; hamuleh in Arabic, hısım in Turkish)6, lead-ing to homozygosity rates greater than those predicted by the degree of kinship alone7. By contrast, consanguinity on the northern rim of the Mediterranean basin is generally low.

Consanguinity has a direct impact on the frequency of recessive diseases. With multiple layers of consanguinity, the number of indi-viduals affected with any recessive disease is proportional to the disease allele frequency. By contrast, in a large, randomly mating pop-ulation, the number of affected individuals is proportional to the square of the disease allele frequency8. Coupled with the large family size that is characteristic of the southern rim of the Mediterranean and the Middle East, this statis-tic results in increased frequency of recessive disease, creating human and medical chal-lenges, but also the scientific opportunities to address them.

Recessive diseases in consanguineous com-munities vary in frequency, based on the ages of the mutations responsible for them and selec-tive pressures on the phenotype9. The hemo-globinopathies, G6PD deficiency and familial Mediterranean fever are frequent throughout the region. Inherited hearing loss, Bardet-Biedl syndrome and Meckel Gruber syndrome are frequent in many communities in the region. Other conditions appear in a local community or clan, or specifically in one family. The num-ber of diseases is very large, because any muta-tion that is not lethal early in pregnancy can be revealed through consanguinity. Many of these traits, particularly the most rare, have not yet

been studied. For example, of the 577 reces-sive diseases that have been reported in Arab families (http://www.cags.org.ae/ctga_search.html), the responsible loci are not known for 168. Many other recessive diseases, especially those confined to single families, are not even reported.

The gap in identifying genes responsi-ble for Mendelian diseases is not unique to Mediterranean populations: the molecular bases of at least 3,800 known or suspected Mendelian diseases are unknown (http://www.ncbi.nlm.nih.gov/sites/entrez?db=omim). Southern and eastern Mediterranean populations are unique in that for recessive traits in consanguineous communities, identification of the causative genes is eminently feasible using homozygosity mapping and sequencing. The success of this approach can be seen from the large number of disease genes that have been identified by study-ing Mediterranean families (Table 1).

Current genomics research in the Mediterranean basinMolecular studies of disease genes began in the 1980s with the identification of the muta-tion spectrum of X-linked diseases such as Duchenne/Becker muscular dystrophy and hemophilia, and recessive diseases such as the thalassemias, phenylketonuria and cystic fibrosis. These studies extended in the 1990s to linkage mapping of rare diseases, and have evolved today to homozygosity mapping using SNP arrays, which is powerful enough to identify disease loci even in families too small to obtain meaningful results using tradi-tional linkage approaches10. In the early years genetic analysis of Mediterranean families was often performed outside the region, in col-laborations with American and European cen-ters. However, over time these collaborations have evolved and genetic analyses are increas-ingly performed in regional laboratories. Examples of genes that have been identified in the region include those responsible for deaf-ness (FGF3, MYO3A, OTOA, OTOF, POU4F3, SERPINB6, TECTA, TRIOBP, WHRN), neu-rodevelopmental disorders (ALS2, FA2H, FGD4, SNAP29, VLDLR, VRK1) and other rare diseases (ALX1, BBS10, CHST14, DDR2, SLC34A2, TAC3, TACR3) (see Table 1 for a comprehensive list). In parallel, biobanks and genomic databases funded through governmental research programs have been established in several countries in the region, with active participation in Orphanet (http://www.orpha.net/consor/cgi-bin/index.php), the EU-funded portal for rare diseases and orphan drugs. If properly supported, these developments in general and local capacity are likely to lead to an explosion in gene discovery

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which in the near future might be limited only by the phenotype discovery rate.

World Health Organization statistics indi-cate that the global burden of disease is shifting from infectious to noncommunicable diseases11. Many of these diseases are genetically influ-enced. The responsible genes can be identified using population resources and tools now at hand. A concentrated effort to solve the genetic bases of noncommunicable diseases will have an important public health impact far beyond the specific alleles identified in the first families to be studied. The genetic dissection of well char-acterized disease phenotypes in large kindreds will reveal genes that underlie complex, hetero-geneous diseases. Indeed, pathways relevant to common diseases are often identified through genes responsible for related rare disorders12.

Translating human genomic research into clinical practiceAs a consequence of consanguinity, the preva-lence at birth of severe congenital genetic disor-ders in the eastern Mediterranean is among the highest in the world: >65 affected children per 1,000 live births13. From a regional perspective, programs that address recessive diseases have a high priority and need to go beyond gene identi-fication to the characterization of the mutational spectrum relevant to each locale, and to the pro-vision of community-based medical genetics services. This extremely sensitive issue, owing to its ethical, legal and social aspects, can best be addressed by professionals from the same cul-tures as the affected families, and this is most likely to lead to clinically effective outcomes. From a global perspective, this agenda is rele-vant to the challenges of the post-genome era14, especially in the fields of personalized medicine and identification of new drug targets emerg-ing from genomic analysis of common and rare diseases. According to currently available statistics, more than 1,500 laboratories perform genetic tests in the EU, and the annual growth in testing is close to 300%. With a population size comparable to the EU, the development, harmonization, validation and standardization of genetic testing services is a high-priority area in the Mediterranean basin.

The implementation and delivery of services through national health systems is not easy, but the large and diverse populations of the Mediterranean basin have access to excellent universities, institutes and clinics. In many parts of the region, medical genetics is a recognized clinical specialty or sub-specialty, strengthened by highly trained dysmorphologists, pediatri-cians and human geneticists. Close collaboration with the European Society of Human Genetics, the American Society of Human Genetics and the American College of Medical Genetics has

led to many national and regional congresses, workshops, and symposia focused on training, education, and workforce planning in medi-cal genetics. Future MediMedGen meetings are planned, including one in Cyprus in 2011. The Mediterranean basin is also the home of the European Genetics Foundation, which organizes regular courses in genetic medicine, attended by more than 6,000 students over the last two decades (http://www.eurogene.eu/). To address the standardization and harmo-nization of genetics services, Mediterranean geneticists have taken active roles in projects such as EuroGenTest (http://www.eurogentest.org/), MedGenMed and MedGeNet (http://www.eurogene.eu/), through which resources for assessing and addressing ethical, social and legal issues are also available (http://www.cags.org.ae/ctga_search.html). Finally, progress in the computational use of medical and genomic data is reflected in genetic and genomic data-bases of Mediterranean populations that have already been launched15. We predict that these assets will be crucial for the integration of genet-ics research into the delivery of health outcomes in the region and the world.

A plan for the futureOn the basis of these considerations, we pro-pose an international collaborative Center of Excellence for Genomics Research in the Mediterranean region, supported by inter-national and national funding agencies. We suggest that this Center of Excellence be geo-graphically decentralized and function as a network of researchers and genomics research centers whose primary remit would be to sup-port and facilitate joint research proposals. Members of the Center would include sci-entists from the region and those supporting the development of genomics in the region. They would engage in projects centered in Mediterranean laboratories whenever pos-sible, and involving transfer of technology and training, to make the Mediterranean focus increasingly realistic with time.

There is much greater strength in using resources to support science in existing insti-tutions rather than creating a new physical structure. A decentralized, international, col-laborative, investigator-initiated model alle-viates hurdles of bureaucracy and facilitates international decision-making. We believe that work to facilitate the generation of whole-genome sequence data from representative Mediterranean populations, and the discovery and characterization of genes based on well defined phenotypes in large kindreds and/or consanguineous families, should be scientifi-cally and socially attractive to funding agen-cies within and beyond the Mediterranean

region. A wide range of human traits, both rare and common, could be evaluated. The proposed scientific structure and objectives are excellent models and realistic goals for collaborative genomics for human health and cooperation in the Mediterranean basin, and could have an important impact on public health.

ConclusionDuring the past two decades, working with families from the Mediterranean region, sci-entists from Algeria, Cyprus, Egypt, France, Greece, Israel, Italy, Jordan, Lebanon, Morocco, Palestine, Tunisia and Turkey have collaborated with each other and with geneticists worldwide to identify the genes responsible for many inher-ited diseases, both common and rare. Active collaborations across the region are presently exploring human genomic variation to bet-ter understand susceptibility and resistance to disease. These projects demonstrate the shared culture and goals of human genetics, and serve as a testimony to the commitment to interna-tional collaboration. The present interest of the US government encourages us to take another important step in these efforts.

ACKNOWLEDGMENTSThis Commentary is dedicated to the memory of Ihsan Dogramaci, a pioneer and reformer in child health and higher education, one of the founders of WHO, the longest serving Executive Board member of UNICEF and a tireless campaigner for world peace.

COMPETING FINANCIAL INTERESTSThe authors declare no competing financial interests.

1. Lee, J. The President’s speech in Cairo: a new begin-ning. The White House Blog <http://www.whitehouse.gov/Blog/NewBeginning> (2009).

2. Anonymous. Secretary Clinton announces global part-nerships to advance Cairo’s ‘New Beginning’. The US Department of State <http://www.state.gov/r/pa/prs/ps/2009/nov/131232.htm> (2009).

3. Anonymous. Editorial. Nat. Genet. 41, 861 (2009).4. House of Lords Science and Technology Committee.

Genomic medicine vol. 1: report. <http://www.publications.parliament.uk/pa/ld200809/ldselect/ldsctech/107/107i.pdf> (2009).

5. Hawass, Z. et al. J. Am. Med. Assoc. 303, 638–647 (2010).

6. Tadmouri, G.O. et al. Reprod. Health 6, 17 (2009).7. Woods, C.G. et al. Am. J. Hum. Genet. 78, 889–896

(2006).8. Lander, E.S. & Botstein, D. Science 236, 1567–1570

(1987).9. Zlotogora, J. Am. J. Med. Genet. 109, 176–182

(2002).10. Shahin, H. et al. Eur. J. Hum. Genet. 18, 407–413

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disease: 2004 update. <http://www.who.int/health-info/global_burden_disease/2004_report_update/en/index.html> (2004).

12. McClellan, J. & King, M.C. Cell 141, 210–217 (2010).

13. Alwan, A. & Modell, B. Nat. Rev. Genet. 4, 61–68 (2003).

14. Collins, F. Nature 464, 674–675 (2010).15. Tadmouri, G.O. Al Ali, M.T., Al-Haj Ali, S. & Al Khaja,

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644 volume 42 | number 8 | august 2010 | nature genetics

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fnes

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omal

rec

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ve 2

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60

98

23

TRIO

BP

Pal

esti

neAm

. J. H

um. G

enet

. 78,

14

4–1

52

(2

00

6)

Dea

fnes

s, a

utos

omal

rec

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ve 3

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rael

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aqi J

ewis

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oc. N

atl.

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. Sci

. USA

99,

75

18

–75

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(2

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rec

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ve 3

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WH

RN

Pal

esti

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r. J.

Hum

. Gen

et. 1

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)

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s, a

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omal

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PIN

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Turk

eyAm

. J. H

um. G

enet

. 86,

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(2

01

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Hyp

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urop

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um. M

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. 10,

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21

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00

ADAM

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Iraq

, Jor

dan

Am. J

. Hum

. Gen

et. 8

4, 2

74

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8 (

20

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)

Epi

leps

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rogr

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ve m

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, 1B

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24

37

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KLE

1Is

rael

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ales

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Jor

dan

Am. J

. Hum

. Gen

et. 8

3, 5

72

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1 (

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08

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cal

vari

al h

yper

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sis

61

27

14

COX4

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rael

(P

ales

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an)

Am. J

. Hum

. Gen

et. 8

4, 4

12

–41

7 (

20

09

)

Fran

k-Te

r H

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synd

rom

e2

49

42

0SH

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2BIs

rael

, Leb

anon

, Tur

key

Am. J

. Hum

. Gen

et. 8

6, 2

54

–26

1 (

20

10

)

Fras

er s

yndr

ome

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90

00

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ance

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ece,

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at. G

enet

. 34,

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08

(2

00

3)

Fron

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asia

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ALX1

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eyAm

. J. H

um. G

enet

. 86,

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9–7

96

(2

01

0)

H s

yndr

ome

61

23

91

SLC2

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el (

Pal

esti

nian

), B

ulga

ria

Am. J

. Hum

. Gen

et. 8

3, 5

29

–53

4 (

20

08

)

Hyp

eros

tosi

s-hy

perp

hosp

hate

mia

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drom

e6

10

23

3G

ALN

T3Is

rael

(D

ruze

), P

ales

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J. M

ol. M

ed. 8

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8 (

20

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)

Hyp

ogon

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. Gen

et. 4

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54

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8 (

20

09

)

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is, c

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ular

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Isra

el (

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Nat

. Gen

et. 2

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34

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20

01

)

Icht

hyos

is, l

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lar

36

04

77

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ia, F

ranc

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taly

, Leb

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. Gen

et. 1

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67

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6 (

20

06

)

Icht

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is w

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s, a

utos

omal

rec

essi

ve6

10

76

5ST

14Is

rael

(P

ales

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an)

Am. J

. Hum

. Gen

et. 8

0, 4

67

–47

7 (

20

07

)

Jalil

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drom

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17

08

0CN

NM

4K

osov

o, L

eban

onAm

. J. H

um. G

enet

. 84,

25

9–2

65

(2

00

9)

Joub

ert

synd

rom

e 2

60

80

91

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216

Isra

el (

Ash

kena

zi J

ewis

h)Am

. J. H

um. G

enet

. 86,

93

–97

(2

01

0)

Kin

dler

syn

drom

e1

73

65

0FE

RM

T1A

lger

ia, T

unis

iaH

um. M

ol. G

enet

. 12,

92

5–9

35

(2

00

3)

Kra

bbe

dise

ase

24

52

00

GAL

CIs

rael

(P

ales

tini

an)

Am. J

. Hum

Gen

et. 5

3, 1

25

0–1

25

5 (

19

93

)

Kuf

or-R

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syn

drom

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06

69

3AT

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Nat

. Gen

et. 3

8, 1

18

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20

06

)

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al c

onge

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l con

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75

98

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Isra

el (

Bed

ouin

)Am

. J. H

um. G

enet

. 81,

58

9–5

95

(2

00

7)

Leth

al c

onge

nita

l con

trac

tura

l syn

drom

e 3

61

13

69

PIP5

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Isra

el (

Bed

ouin

)Am

. J. H

um. G

enet

. 81,

53

0–5

39

(2

00

7) (c

onti

nued

)

Tabl

e 1

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mpl

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f ge

nes

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men

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n di

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enti

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neou

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mili

es f

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med

iter

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an r

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n (c

onti

nued

)

Dis

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m M

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in M

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Fam

ily o

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atin

g an

d sp

asti

c pa

rapa

resi

s w

ith

or w

itho

ut d

ysto

nia

61

24

43

FA2H

Isra

el (

Pal

esti

nian

)Am

. J. H

um. G

enet

. 83,

64

3–6

48

(2

00

8)

Lipo

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roph

y, c

onge

nita

l gen

eral

ized

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e 2

26

97

00

BSC

L2Le

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n, T

urke

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at. G

enet

. 28,

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70

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00

1)

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ilure

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ile6

13

07

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MU

Isra

el (

Yem

enit

e Je

wis

h)Am

. J. H

um. G

enet

. 85,

40

1–4

07

(2

00

9)

Mac

roce

phal

y, a

lope

cia,

cut

is la

xa a

nd s

colio

sis

61

30

75

RIN

2Is

rael

(P

ales

tini

an)

Am. J

. Hum

. Gen

et. 8

5, 2

54

–26

3 (

20

09

)

Maj

eed

synd

rom

e6

09

62

8LP

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Jord

anJ.

Med

. Gen

et. 4

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51

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20

05

)

Mal

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24

83

00

SLU

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Alg

eria

, Cro

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Hum

. Mol

. Gen

et. 1

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0 (

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Mic

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20

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20

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)

Mic

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l del

ay6

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40

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Ital

y, P

ales

tine

, Jor

dan,

Tur

key

Nat

. Gen

et. 4

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45

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9 (

20

10

)

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ocho

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al c

ompl

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V de

fici

ency

22

01

10

FAST

KD

2Is

rael

(B

edou

in)

Am. J

. Hum

. Gen

et. 8

3, 4

15

–42

3 (

20

08

)

Mit

ocho

ndri

al D

NA

dep

leti

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yndr

ome,

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phal

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h m

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ac

idur

is, a

utos

omal

rec

essi

ve6

12

07

3SU

CLA2

Isra

el (

Pal

esti

nian

)Am

. J. H

um. G

enet

. 76,

10

81

–10

86

(2

00

5)

Mit

ocho

ndri

al D

NA

dep

leti

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yndr

ome,

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ral f

orm

, aut

osom

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sive

25

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80

DG

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rael

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ruze

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enet

. 29,

33

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41

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00

1)

Muc

olip

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1Is

rael

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Nat

. Gen

et. 2

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00

)

Mul

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00

0CH

RN

GLe

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n, T

urke

yAm

. J. H

um. G

enet

. 79,

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12

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6)

Myo

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omal

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ve2

68

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Isra

el (

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esti

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)Am

. J. H

um. G

enet

. 83,

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94

(2

00

8)

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Isra

el (

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. J. H

um. G

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. 79,

94

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00

6)

Odo

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98

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. J. H

um. G

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. 81,

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28

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00

7)

Ost

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. J. H

um. G

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. 86,

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59

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, Leb

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. Gen

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99

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Par

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. 18,

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66

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00

9)

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Jord

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urke

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Med

. Gen

et. 3

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um. M

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rael

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nce

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–20

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Isra

el (

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kena

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. J. H

um. G

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. 85,

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9)

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el (

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hard

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. J. H

um. G

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. 81,

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rkey

Am. J

. Hum

. Gen

et. 7

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50

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el (

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at. G

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. 38,

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Sex

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11

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Isra

el (

Pal

esti

nian

)Am

. J. H

um. G

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. 82,

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WN

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. 17,

26

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66

5D

DR

2Is

rael

(S

epha

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ish)

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esti

neAm

. J. H

um. G

enet

. 84,

80

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00

9)

Thre

e M

syn

drom

e 1

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50

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Fran

ce, I

taly

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anon

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lN

at. G

enet

. 37,

11

19

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24

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rael

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ruze

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Nat

. Gen

et. 3

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el (

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. J. H

um. G

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. 79,

75

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6)

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et. 1

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)

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. Gen

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Nat

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10Le

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. J. H

um. G

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. 75,

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4)

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fram

syn

drom

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49

28

CISD

2Jo

rdan

Am. J

. Hum

. Gen

et. 8

1, 6

73

–68

3 (

20

07

)

Page 5: Collaborative Genomics

© 2

010

Nat

ure

Am

eric

a, In

c. A

ll ri

gh

ts r

eser

ved

.commentary

nature genetics | volume 42 | number 8 | august 2010 645

Tabl

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. J. H

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. 85,

87

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82

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9)

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. J. H

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. 82,

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29

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rael

(P

ales

tini

an)

Am. J

. Hum

. Gen

et.

83, 1

93

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9 (

20

08

)

Cen

ani s

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21

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80

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Egy

pt, T

urke

yAm

. J. H

um. G

enet

. 86,

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10

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ia, m

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l ret

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12

24

05

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DLR

Turk

eyPr

oc. N

atl.

Acad

. Sci

. USA

105

, 42

32

–42

36

(2

00

8)

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ebra

l dys

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icht

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nd p

alm

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ntar

ker

atod

erm

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ndro

me

60

95

28

SNAP

29Is

rael

(P

ales

tini

an)

Am. J

. Hum

. Gen

et. 7

7, 2

42

–25

1 (

20

05

)

Cha

rcot

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ooth

dis

ease

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e 4

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09

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1FG

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Alg

eria

, Leb

anon

Am. J

. Hum

. Gen

et. 8

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Cha

rcot

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osom

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Ital

y, J

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n, P

ales

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, Tur

key

Nat

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et. 4

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ortu

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occo

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isia

J. M

ed. G

enet

. 39,

71

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2)

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l wit

h in

ner

ear

agen

esis

, mic

roti

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d m

icro

dont

ia6

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70

6FG

F3Tu

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Am. J

. Hum

. Gen

et. 8

0, 3

38

–34

4 (

20

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)

Dea

fnes

s, a

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omal

rec

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ve 9

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at. G

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. 21,

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fnes

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omal

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24

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Isra

el (

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ian

Jew

ish)

Scie

nce

279,

19

50

–19

54

(1

99

8)

Dea

fnes

s, a

utos

omal

rec

essi

ve 2

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FNB

21

60

36

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bano

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um. M

ol. G

enet

. 8, 4

09

–41

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19

99

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fnes

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omal

rec

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ve 2

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fnes

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omal

rec

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ve 2

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TRIO

BP

Pal

esti

neAm

. J. H

um. G

enet

. 78,

14

4–1

52

(2

00

6)

Dea

fnes

s, a

utos

omal

rec

essi

ve 3

0, D

FNB

30

60

71

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MYO

3AIs

rael

(Ir

aqi J

ewis

h)Pr

oc. N

atl.

Acad

. Sci

. USA

99,

75

18

–75

23

(2

00

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rec

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ve 3

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70

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RN

Pal

esti

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r. J.

Hum

. Gen

et. 1

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Dea

fnes

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utos

omal

rec

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e 9

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91

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SER

PIN

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Turk

eyAm

. J. H

um. G

enet

. 86,

79

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04

(2

01

0)

Hyp

ertr

ophi

c ne

urop

athy

of

Dej

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0PR

XLe

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um. M

ol. G

enet

. 10,

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00

1)

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ted,

aut

osom

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51

00

ADAM

TSL4

Iraq

, Jor

dan

Am. J

. Hum

. Gen

et. 8

4, 2

74

–27

8 (

20

09

)

Epi

leps

y, p

rogr

essi

ve m

yocl

onic

, 1B

61

24

37

PRIC

KLE

1Is

rael

(P

ales

tini

an),

Jor

dan

Am. J

. Hum

. Gen

et. 8

3, 5

72

–58

1 (

20

08

)

Exo

crin

e pa

ncre

atic

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ffic

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y, d

yser

ythr

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ane

mia

and

cal

vari

al h

yper

osto

sis

61

27

14

COX4

I2Is

rael

(P

ales

tini

an)

Am. J

. Hum

. Gen

et. 8

4, 4

12

–41

7 (

20

09

)

Fran

k-Te

r H

aar

synd

rom

e2

49

42

0SH

3PXD

2BIs

rael

, Leb

anon

, Tur

key

Am. J

. Hum

. Gen

et. 8

6, 2

54

–26

1 (

20

10

)

Fras

er s

yndr

ome

21

90

00

FRAS

1Fr

ance

, Gre

ece,

Leb

anon

, Spa

inN

at. G

enet

. 34,

20

3–2

08

(2

00

3)

Fron

tona

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yspl

asia

NA

ALX1

Turk

eyAm

. J. H

um. G

enet

. 86,

78

9–7

96

(2

01

0)

H s

yndr

ome

61

23

91

SLC2

9A3

Isra

el (

Pal

esti

nian

), B

ulga

ria

Am. J

. Hum

. Gen

et. 8

3, 5

29

–53

4 (

20

08

)

Hyp

eros

tosi

s-hy

perp

hosp

hate

mia

syn

drom

e6

10

23

3G

ALN

T3Is

rael

(D

ruze

), P

ales

tine

J. M

ol. M

ed. 8

3, 3

3–3

8 (

20

05

)

Hyp

ogon

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c hy

pogo

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sm1

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11

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C3, T

ACR

3Tu

rkey

Nat

. Gen

et. 4

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54

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8 (

20

09

)

Hyp

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chos

is, c

onge

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l, w

ith

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nile

mac

ular

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trop

hy6

01

55

3CD

H3

Isra

el (

Dru

ze)

Nat

. Gen

et. 2

9, 1

34

–13

6 (

20

01

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Icht

hyos

is, l

amel

lar

36

04

77

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P4F2

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lger

ia, F

ranc

e, I

taly

, Leb

anon

Hum

. Mol

. Gen

et. 1

5, 7

67

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6 (

20

06

)

Icht

hyos

is w

ith

hypo

tric

hosi

s, a

utos

omal

rec

essi

ve6

10

76

5ST

14Is

rael

(P

ales

tini

an)

Am. J

. Hum

. Gen

et. 8

0, 4

67

–47

7 (

20

07

)

Jalil

i syn

drom

e2

17

08

0CN

NM

4K

osov

o, L

eban

onAm

. J. H

um. G

enet

. 84,

25

9–2

65

(2

00

9)

Joub

ert

synd

rom

e 2

60

80

91

TMEM

216

Isra

el (

Ash

kena

zi J

ewis

h)Am

. J. H

um. G

enet

. 86,

93

–97

(2

01

0)

Kin

dler

syn

drom

e1

73

65

0FE

RM

T1A

lger

ia, T

unis

iaH

um. M

ol. G

enet

. 12,

92

5–9

35

(2

00

3)

Kra

bbe

dise

ase

24

52

00

GAL

CIs

rael

(P

ales

tini

an)

Am. J

. Hum

Gen

et. 5

3, 1

25

0–1

25

5 (

19

93

)

Kuf

or-R

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syn

drom

e6

06

69

3AT

P13A

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rdan

Nat

. Gen

et. 3

8, 1

18

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1 (

20

06

)

Leth

al c

onge

nita

l con

trac

ture

syn

drom

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60

75

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Isra

el (

Bed

ouin

)Am

. J. H

um. G

enet

. 81,

58

9–5

95

(2

00

7)

Leth

al c

onge

nita

l con

trac

tura

l syn

drom

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61

13

69

PIP5

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Isra

el (

Bed

ouin

)Am

. J. H

um. G

enet

. 81,

53

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39

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00

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onti

nued

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Tabl

e 1

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n di

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med

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onti

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)

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d sp

asti

c pa

rapa

resi

s w

ith

or w

itho

ut d

ysto

nia

61

24

43

FA2H

Isra

el (

Pal

esti

nian

)Am

. J. H

um. G

enet

. 83,

64

3–6

48

(2

00

8)

Lipo

dyst

roph

y, c

onge

nita

l gen

eral

ized

, typ

e 2

26

97

00

BSC

L2Le

bano

n, T

urke

yN

at. G

enet

. 28,

36

5–3

70

(2

00

1)

Live

r fa

ilure

, acu

te in

fant

ile6

13

07

0TR

MU

Isra

el (

Yem

enit

e Je

wis

h)Am

. J. H

um. G

enet

. 85,

40

1–4

07

(2

00

9)

Mac

roce

phal

y, a

lope

cia,

cut

is la

xa a

nd s

colio

sis

61

30

75

RIN

2Is

rael

(P

ales

tini

an)

Am. J

. Hum

. Gen

et. 8

5, 2

54

–26

3 (

20

09

)

Maj

eed

synd

rom

e6

09

62

8LP

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Jord

anJ.

Med

. Gen

et. 4

2, 5

51

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7 (

20

05

)

Mal

de

Mel

eda

24

83

00

SLU

RP1

Alg

eria

, Cro

atia

Hum

. Mol

. Gen

et. 1

0, 8

75

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20

01

)

Mic

roce

phal

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steo

dysp

last

ic p

rim

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al d

war

fism

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21

07

20

PCN

T2Le

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nSc

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9, 8

16

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20

08

)

Mic

roce

phal

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and

deve

lopm

enta

l del

ay6

13

40

2PN

KP

Ital

y, P

ales

tine

, Jor

dan,

Tur

key

Nat

. Gen

et. 4

2, 2

45

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9 (

20

10

)

Mit

ocho

ndri

al c

ompl

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fici

ency

22

01

10

FAST

KD

2Is

rael

(B

edou

in)

Am. J

. Hum

. Gen

et. 8

3, 4

15

–42

3 (

20

08

)

Mit

ocho

ndri

al D

NA

dep

leti

on s

yndr

ome,

ene

phal

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path

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h m

ethy

lmal

onic

ac

idur

is, a

utos

omal

rec

essi

ve6

12

07

3SU

CLA2

Isra

el (

Pal

esti

nian

)Am

. J. H

um. G

enet

. 76,

10

81

–10

86

(2

00

5)

Mit

ocho

ndri

al D

NA

dep

leti

on s

yndr

ome,

hep

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ral f

orm

, aut

osom

al r

eces

sive

25

18

80

DG

UO

KIs

rael

(D

ruze

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at. G

enet

. 29,

33

7–3

41

(2

00

1)

Muc

olip

idos

is I

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52

65

0M

COLN

1Is

rael

(A

shke

nazi

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ish)

Nat

. Gen

et. 2

6, 1

18

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20

00

)

Mul

tipl

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ium

syn

drom

e, E

scob

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aria

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65

00

0CH

RN

GLe

bano

n, T

urke

yAm

. J. H

um. G

enet

. 79,

30

3–3

12

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00

6)

Myo

glob

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ia, a

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rec

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nt, a

utos

omal

rec

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ve2

68

20

0LP

IN1

Isra

el (

Pal

esti

nian

)Am

. J. H

um. G

enet

. 83,

48

9–4

94

(2

00

8)

Neu

rode

gene

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ith

brai

n ir

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ccum

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66

00

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Isra

el (

Bed

ouin

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. J. H

um. G

enet

. 79,

94

2–9

48

(2

00

6)

Odo

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mal

dys

plas

ia2

57

98

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bano

nAm

. J. H

um. G

enet

. 81,

82

1–8

28

(2

00

7)

Ost

eoge

nesi

s im

perf

ecta

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FKB

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Turk

eyAm

. J. H

um. G

enet

. 86,

55

1–5

59

(2

01

0)

Pap

illon

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syn

drom

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00

0CT

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gypt

, Leb

anon

Nat

. Gen

et. 2

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21

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4 (

19

99

)

Par

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l for

amin

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60

95

97

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Turk

eyH

um. M

ol. G

enet

. 18,

43

57

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66

(2

00

9)

Per

iodo

ntit

is, a

ggre

ssiv

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17

06

50

CTSC

Jord

an, T

urke

yJ.

Med

. Gen

et. 3

7, 9

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01

(2

00

0)

Pol

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tic

lipom

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s os

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sing

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22

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70

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bano

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um. M

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00

8)

Pol

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ria,

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tera

l fro

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60

68

54

GPR

56Is

rael

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ales

tini

an)

Scie

nce

303,

20

33

–20

36

(2

00

4)

Pon

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plas

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16

07

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Isra

el (

Ash

kena

zi J

ewis

h)Am

. J. H

um. G

enet

. 85,

28

1–2

89

(2

00

9)

Pon

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plas

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52

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Isra

el (

Sep

hard

ic J

ewis

h)Am

. J. H

um. G

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. 81,

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7–8

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(2

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7)

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mon

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olar

mic

rolit

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0SL

C34A

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rkey

Am. J

. Hum

. Gen

et. 7

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50

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06

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Isra

el (

Mor

occa

n Je

wis

h)N

at. G

enet

. 38,

74

9–7

51

(2

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6)

Sex

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lung

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11

81

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Isra

el (

Pal

esti

nian

)Am

. J. H

um. G

enet

. 82,

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(2

00

8)

Spl

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mal

form

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n 6

22

53

00

WN

T10B

Turk

eyH

um. M

ol. G

enet

. 17,

26

44

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53

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8)

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eta-

epip

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, sho

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mb-

hand

typ

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71

66

5D

DR

2Is

rael

(S

epha

rdic

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ish)

, Pal

esti

neAm

. J. H

um. G

enet

. 84,

80

–84

(2

00

9)

Thre

e M

syn

drom

e 1

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37

50

CUL7

Fran

ce, I

taly

, Leb

anon

, Por

tuga

lN

at. G

enet

. 37,

11

19

–11

24

(2

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5)

Tum

oral

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cino

sis,

hyp

erph

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atem

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11

90

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ALN

T3Is

rael

(D

ruze

), P

ales

tine

Nat

. Gen

et. 3

6, 5

79

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04

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Tum

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sis,

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55

SAM

D9

Isra

el (

Yem

enit

e Je

wis

h)Am

. J. H

um. G

enet

. 79,

75

9–7

64

(2

00

6)

Ush

er s

yndr

ome,

typ

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69

43

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rdan

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ales

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Hum

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et. 1

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20

02

)

Vita

min

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amili

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efic

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74

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Fran

ce, I

taly

, Mor

occo

, Tun

isia

Nat

. Gen

et. 9

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99

5)

War

burg

mic

ro s

yndr

ome

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occo

Nat

. Gen

et. 3

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21

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05

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arch

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drom

e, a

utos

omal

rec

essi

ve2

77

60

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AMTS

10Le

bano

nAm

. J. H

um. G

enet

. 75,

80

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