cd6-alcam pathway is elevated in patients with severe asthma€¦ · cd6-alcam pathway is elevated...

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CD6-ALCAM Pathway is Elevated in Patients with Severe Asthma 1 Division of Respirology, Department of Medicine, McMaster University & St Joseph’s Healthcare Hamilton, Ontario, Canada; 2 Monoceros Biosystems LLC, San Diego, CA USA; 3 Equillium, Inc, La Jolla, CA USA Introduction Figure 1 Figure 3 Healthy Moderate Severe 0 2 4 6 CD6 expression (log2FPKM) *** *** Healthy Moderate Severe -0.5 0.0 0.5 1.0 1.5 CD3e expression (log2FPKM) *** *** Healthy Moderate Severe 0.0 0.4 0.8 1.2 IL17F expression (log2FPKM) ** ** Healthy Moderate Severe -1 0 1 2 3 4 IFNG expression (log2FPKM) Healthy Moderate Severe -0.5 0.0 0.5 1.0 1.5 IL4 expression (log2FPKM) ** * 1 Manali Mukherjee, 1 Nan Zhao, 1 Katherine Radford, 2 Sole Gatto, 2 Adam Pavlicek, 3 Jeanette Ampudia, 3 Cherie Ng, 3 Stephen Connelly & 1 Parameswaran Nair Conclusions The data indicate that the CD6-ALCAM pathway is elevated in severe asthmatics and may be a viable target in the treatment of severe, uncontrolled asthma. The ability to detect ALCAM in sputum may provide a non-invasive approach to further examine this pathway. Blockade of CD6 is currently being tested in a clinical trial for the treatment of severe asthma. Clinical Trial Identifier: NCT04007198 To examine CD6 expression and other genes associated with the pathway, we analyzed a publicly available gene expression microarray dataset from BAL cells of non-asthma, moderate asthma and severe asthma patients derived from two multi-center observational studies BOBCAT and MAST 1-3 . Global microarray normalization using the vsn package 4 . Log2 intensities are shown in figures 1 and 2. Differential expression was calculated with limma package 5 . To examine ALCAM levels, sputum was collected from 22 characterized asthmatics on inhaled corticosteroids. Patients were categorized by >3% or <3% sputum eosinophils (sp-Eos; n=11/group). The supernatant processed from plugs (dispersed in phosphate buffered saline), was further diluted 1:5 and ALCAM levels measured by ELISA (R&D Biosystems). Methods Eos (%) Non-eos (%) p-value n 11 11 ---- Sex (M) 7 (63) 5 (45) 0.3 Atopic (n,%) 8 (72.7) 5 (45.4) 0.4 Age 53.55 (15.6) 56.00 (18.6) 0.74 BMI 28.10 (3.7) 27.27 (7.2) 0.74 FEV1% 76.67 (17.5) 71.87 (23.8) 0.6 FEV1/FVC 0.65 (0.036) 0.67 (0.04) 0.71 Blood eosinophil 0.55 (0.44) 0.28 (0.29) 0.11 Sp eosinophil % 28.92 (18.86) 0.75 (0.79) 0 Sp neutrophil % 28.31 (16.78) 63.10 (30.07) 0.04 FEG (median) 3 (0-3) 0 (0-1) 0.0001 ICS (median) 1000 (250-2000) 1000 (0-3200) 0.9 OCS (median) 0 (0-7.5) 0 (0-7.5) >0.9 Clinical Need: A subset of severe asthma patients have persistent airway inflammation despite high dose inhaled and/or oral corticosteroid therapy Steroid insensitivity in a portion of these patients may be driven by non-classical T2 inflammatory pathways. The CD6-ALCAM pathway: CD6 is a co-stimulatory receptor on T-cells and certain innate lymphoid cells that binds activated leukocyte cell adhesion molecule (ALCAM) on antigen presenting cells and endothelial and epithelial tissues The CD6-ALCAM pathway plays an integral role in modulating T cell activation and trafficking and is central to immune mediated inflammation. The pathway is implicated in T2 (T h 2), non-T2 (T h 1/T h 17) and innate lymphoid cells (group 2) driven responses responses, demonstrating effects in multiple disease models including allergic asthma. Objective: Examine the CD6-ALCAM axis as a potential target for severe asthma. B cell Eosinophil Allergens Type 2 Inflammation Non-Type 2 / T h 17 Inflammation Irritants, pollutants, microbes, and viruses Neutrophil Mast cell IL-25 CXCL8 IL-6 T h 17 cell TSLP IL-3, IL-4, IL-5, IL-9 IL-6, IL-17, IL-8 TGF-βV IL-23 T h 1 cell IFN-γ ILC2 IL-4 IL-5 IL-33 T h 2 cell GM-CSF CD6 TNF IgE CD6 CD6 CD6 T eff ALCAM IL-13 IL-4, IL-5, IL-13 Healthy Moderate Severe 0 2 4 6 CD4 expression (log2FPKM) * * Healthy Moderate Severe 0 2 4 6 8 CD8a expression (log2FPKM) ** **** A B C D Patients with severe asthma had significantly increased expression of (A) CD6 with concomitant increases in T cell markers (B) CD3, (C) CD4, and (D) CD8 compared to moderate and non-asthma patients. ( ***p<0.001, *p<0.05) Figure 2 Healthy Moderate Severe -1 0 1 2 3 IL13 expression (log2FPKM) ** ** Healthy Moderate Severe -2 0 2 4 6 8 CCR3 expression (log2FPKM) * ** Healthy Moderate Severe 0 2 4 6 IL1A expression (log2FPKM) **** **** Healthy Moderate Severe -2 0 2 4 6 IL21R expression (log2FPKM) **** **** Healthy Moderate Severe 0 2 4 6 8 TBX21 expression (log2FPKM) *** *** Patients with severe asthma had significantly increased cytokines, including, (A) IL17F, (B) IFNG, (C) IL4, (D) CCR3, (F) IL13, (G) TBX21 and (H) IL21R, compared to moderate and non-asthma patients. ( ***p<0.001, *p<0.05) (A) Analysis of sputum ALCAM levels revealed significantly higher concentrations in eosinophilic vs non-eosinophilic patients (3.8±3 vs. 1.2±1.3ng/mL; p=0.04). (B) When non- eosinophilic patients were categorized by neutrophilic (n=5) or paucigranulocytic (n=6), ALCAM levels were significantly higher in eosinophilic vs. paucigranulocytic patients (0.6±0.9 ng/mL; p=0.03). A B Table 1. Sputum was collected from 22 characterized asthmatics on inhaled/oral corticosteroids (not on any anti-T2 biologics). Patients were categorized by >3% or <3% sputum eosinophils (sp-Eos; n=11/group) A B D C E F G H Figure Legend: CD6 is expressed on Th1, Th2, Th17 and ILC2 effector cells that secrete multiple proinflammatory cytokines implicated in asthma pathogenesis. ALCAM is expressed on antigen presentation cells that activate effector cells. ALCAM is also expressed on endothelial and smooth muscle cells where it plays a role in trafficking of CD6+ effector cells. Adapted from Israel E, et al., N Engl J Med. 2017;377(10):965-976. References: 1 Sun et al., Sci. Signal. 2015 Dec 1;8(405):ra122; 2 Jia et al., J Allergy Clin Immunol. 2012 Sept; 130(3): 647–654.e10; 3 Simpson et al., Nat Immunol. 2014 December ; 15(12): 1162–1170; 4 Huber W et al., Bioinformatics 2002;18 Suppl 1:S96-104; 5 Ritchie et al., 2015 Nucleic Acids Res. 2015 Apr 20;43(7):e47 Eos Non-eos 0 2000 4000 6000 8000 10000 Sp ALCAM (pg/mL) P=0.04 Eos Neutro Pauci 0 2000 4000 6000 8000 10000 Sp ALCAM (pg/mL) P=0.03

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Page 1: CD6-ALCAM Pathway is Elevated in Patients with Severe Asthma€¦ · CD6-ALCAM Pathway is Elevated in Patientswith Severe Asthma 1Division of Respirology, Department of Medicine,

CD6-ALCAM Pathway is Elevated in Patients with Severe Asthma

1Division of Respirology, Department of Medicine, McMaster University & St Joseph’s Healthcare Hamilton, Ontario, Canada; 2Monoceros Biosystems LLC, San Diego, CA USA;3Equillium, Inc, La Jolla, CA USA

Introduction Figure 1 Figure 3

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1Manali Mukherjee, 1Nan Zhao, 1Katherine Radford, 2Sole Gatto, 2Adam Pavlicek, 3Jeanette Ampudia, 3Cherie Ng, 3Stephen Connelly & 1Parameswaran Nair

Conclusions

The data indicate that the CD6-ALCAM pathway is elevated in severe asthmatics and may be aviable target in the treatment of severe, uncontrolled asthma. The ability to detect ALCAM insputum may provide a non-invasive approach to further examine this pathway. Blockade ofCD6 is currently being tested in a clinical trial for the treatment of severe asthma. Clinical TrialIdentifier: NCT04007198

• To examine CD6 expression and other genes associated with the pathway, we analyzed a publiclyavailable gene expression microarray dataset from BAL cells of non-asthma, moderate asthma andsevere asthma patients derived from two multi-center observational studies BOBCAT and MAST 1-3.Global microarray normalization using the vsn package4. Log2 intensities are shown in figures 1 and2. Differential expression was calculated with limma package5.

• To examine ALCAM levels, sputum was collected from 22 characterized asthmatics on inhaledcorticosteroids. Patients were categorized by >3% or <3% sputum eosinophils (sp-Eos; n=11/group).The supernatant processed from plugs (dispersed in phosphate buffered saline), was further diluted1:5 and ALCAM levels measured by ELISA (R&D Biosystems).

Methods

Eos (%) Non-eos (%) p-valuen 11 11 ----Sex (M) 7 (63) 5 (45) 0.3Atopic (n,%) 8 (72.7) 5 (45.4) 0.4Age 53.55 (15.6) 56.00 (18.6) 0.74BMI 28.10 (3.7) 27.27 (7.2) 0.74FEV1% 76.67 (17.5) 71.87 (23.8) 0.6FEV1/FVC 0.65 (0.036) 0.67 (0.04) 0.71Blood eosinophil 0.55 (0.44) 0.28 (0.29) 0.11Sp eosinophil % 28.92 (18.86) 0.75 (0.79) 0Sp neutrophil % 28.31 (16.78) 63.10 (30.07) 0.04FEG (median) 3 (0-3) 0 (0-1) 0.0001ICS (median) 1000 (250-2000) 1000 (0-3200) 0.9OCS (median) 0 (0-7.5) 0 (0-7.5) >0.9

Clinical Need:• A subset of severe asthma patients have persistent airway inflammation despite high dose

inhaled and/or oral corticosteroid therapy• Steroid insensitivity in a portion of these patients may be driven by non-classical T2

inflammatory pathways.The CD6-ALCAM pathway:• CD6 is a co-stimulatory receptor on T-cells and certain innate lymphoid cells that binds

activated leukocyte cell adhesion molecule (ALCAM) on antigen presenting cells andendothelial and epithelial tissues

• The CD6-ALCAM pathway plays an integral role in modulating T cell activation andtrafficking and is central to immune mediated inflammation.

• The pathway is implicated in T2 (Th2), non-T2 (Th1/Th17) and innate lymphoid cells (group2) driven responses responses, demonstrating effects in multiple disease models includingallergic asthma.

Objective:• Examine the CD6-ALCAM axis as a potential target for severe asthma.

B cellEosinophil

AllergensType 2 Inflammation Non-Type 2 / Th17 InflammationIrritants, pollutants,

microbes, and viruses

NeutrophilMast cell

IL-25 CXCL8IL-6

Th17cell

TSLP

IL-3, IL-4, IL-5, IL-9

IL-6, IL-17, IL-8

TGF-βV

IL-23 Th1cell

IFN-γ

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IL-4 IL-5

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GM-CSF CD6

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Patients with severe asthma had significantly increased expression of (A) CD6 withconcomitant increases in T cell markers (B) CD3, (C) CD4, and (D) CD8 compared tomoderate and non-asthma patients. ( ***p<0.001, *p<0.05)

Figure 2

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****** Patients with severe asthma

had significantly increasedcytokines, including, (A) IL17F,(B) IFNG, (C) IL4, (D) CCR3, (F)IL13, (G) TBX21 and (H) IL21R,compared to moderate andnon-asthma patients.( ***p<0.001, *p<0.05)

(A) Analysis of sputum ALCAM levels revealed significantly higher concentrations ineosinophilic vs non-eosinophilic patients (3.8±3 vs. 1.2±1.3ng/mL; p=0.04). (B) When non-eosinophilic patients were categorized by neutrophilic (n=5) or paucigranulocytic (n=6),ALCAM levels were significantly higher in eosinophilic vs. paucigranulocytic patients(0.6±0.9 ng/mL; p=0.03).

A B

Table 1. Sputum was collected from 22 characterized asthmatics on inhaled/oralcorticosteroids (not on any anti-T2 biologics). Patients were categorized by >3% or <3%sputum eosinophils (sp-Eos; n=11/group)

A B

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G H

Figure Legend: CD6 is expressed on Th1, Th2, Th17 and ILC2 effector cells that secrete multiple proinflammatory cytokinesimplicated in asthma pathogenesis. ALCAM is expressed on antigen presentation cells that activate effector cells. ALCAM isalso expressed on endothelial and smooth muscle cells where it plays a role in trafficking of CD6+ effector cells. Adaptedfrom Israel E, et al., N Engl J Med. 2017;377(10):965-976.

References: 1Sun et al., Sci. Signal. 2015 Dec 1;8(405):ra122; 2Jia et al., J Allergy Clin Immunol. 2012 Sept; 130(3): 647–654.e10; 3Simpson et al., Nat Immunol. 2014 December ; 15(12): 1162–1170; 4 Huber W et al., Bioinformatics 2002;18 Suppl 1:S96-104; 5 Ritchie et al., 2015 Nucleic Acids Res. 2015 Apr 20;43(7):e47

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