by eddy rempel may 13, 2005 sosgssd 2005 power considerations in the “quality initiative in rectal...
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by Eddy Rempel
May 13, 2005
SOSGSSD 2005
Power Considerations in the “Quality Initiative in Rectal
Cancer” Trial Design
• Research on TME
• QIRC Trial
• Factors impacting power
• Sample Size Calculations
Presentation Outline
• Refinement of rectal cancer surgery
• Removal of lymph node bearing tissue
• Retains autonomic nerves
• preserving bowel, bladder, and sexual function
• Reduces need for radiation and chemotherapy
• Great patient outcomes in Europe
• 5000 rectal cancers diagnosed in Ontario per year
Motivation for Total Mesorectal Excision (TME) Research
• MacFarlane JK, Ryall RD, Heald RJ. Mesorectal excision for rectal cancer. Lancet 1993; 341(8843):457-460.• SRCT. N Engl J Med 1997; 336(14):980-7.• Kapiteijn E, et al. Preoperative radiotherapy combined with total mesorectal excision for resectable rectal cancer. N Engl J Med 2001; 345(9): 638-46.
TME Surgery + Chemo + Radiation
England
Netherlands
Sweden
5%
4.1%
11%
13.5%
11.5%
27%
TME Recurrence Rates in Europe: TME versus Conventional Surgery
Basingstoke Medical Centre Radiation
(N=35)No Radiation
(N=115)
Number of local recurrences 17.1% 2.6%
Permanent colostomy 17.1% 6.1%
Simonovic M, Sexton R, Rempel E, Moran BJ, Heald BJ. Optimal preoperative assessment and surgery for rectal cancer may greatly limit the need for radiotherapy. British Journal of Surgery (August 2003) Volume: 90 , Issue: 8 , Date: August 2003
Outcome Measures for Radiation Groups in English Hospital
TME Pilot Study at Three Hospitals in Ontario
Cases Pre-Intervention
Post-Intervention
Full Intervention
Cases 87 48 39
Colostomies 15 11 4
Rate 22.9% 10.3%
Partial Intervention
Cases 33 12 21
Colostomies 11 4 7
Rate 33.3% 33.3%
• CIHR funding – October 2001
• Randomized Control Trial
• Experimental arm surgeons trained in TME by workshop, operative demonstrations, post operative questionnaires
• Control arm surgeons learn as usual – no limitation on learning and practicing new techniques including TME
• Primary outcomes – rates of permanent colostomy, local recurrence, long-term survival
The QIRC Trial
• Clustered design – Patients within Hospitals
• Hospitals randomized to experimental or control arm
• Surgeons in experimental arm hospitals trained in TME
• No training of control arm surgeons
• Consecutive patients – no randomization of patients
• Clinically relevant difference from experimental to control arm outcome proportions
QIRC Trial Randomization
• CLT the binomial approaches the normal asymptotically
• Good approximation when
p+/- (p(1-p) / n)½ in (0,1)• Even small n is close to normal
•e.g. p=.3 requires only n=10 and p=.08 requires n=46.
Approximating Binomial with Normal Distribution
Mendenhall W, Wackerly D, Scheaffer RL. Mathematical Statistics with Applications, 4 th ed. p. 326, PWS-KENT Publishing Company, 1990.
+/- ((1-) / n)½ in (0,1)
Approximating Binomial with Normal Distribution
Normal Approximation of the Binomial Distribution
X
pdf/p
mf
0 1 2 3 4
0.00.1
0.20.3
0.4
BinomialNormal
n 4p 0.5
Normal Approximation of the Binomial Distribution
X
pdf/p
mf
0 10 20 30 40
0.0
0.05
0.10
0.15
0.20
BinomialNormal
n 46p 0.08
Normal Approximation of the Binomial Distribution
p
pdf/p
mf
0.0 0.2 0.4 0.6 0.8 1.0
05
1015
BinomialNormal
n 168p 0.08
Test that there is a clinical relevant difference between the outcome proportions in the two arms.
H0: e – c = 0 vs. Ha: |e – c| >= d where
e is the proportion with outcome in the experimental arm
c is the proportion with outcome in the control arm
Hypothesis Test
X ~N(n,n(1-))
P=X/n ~N(,(1-)/n)Assume pooled variance
Var[D] = {e(1-e)+c(1-c)}/n
k=z {e(1-e)+c(1-c)}½ n-½
k=z {e(1-e)+c(1-c)}½ n-½
Test Statistic
The sample size of each arm
n = (z+z)2 p2 / 2 where
is the level of the test
=1-, and is the power of the test
p2 = (e(1-e) + c(1-c))*k the variance of a single case
=e–c the difference between arm proportions
Sample Size in Clustered Randomized Control Trial
Donner A, Klar N. Methods for comparing event rates in intervention studies when the unit of allocation is a cluster. Am J Epid 1994; 140:279-89.
•ICC proportion of total variance that is attributed to between clusters variation
= nii(1-i)
(m-1)(1-)where ni and i are the cluster size and proportion, and m and are the average cluster size and proportion when cluster sizes are not too variable
•Then inflation factor k = [1-(1-m)r]
Intra-Class Correlation
•Differences in Proportions
•Intra-class correlation
•One or Two-sided Tests
•Sample Size
Power sensitivity to variables
Power of Clinically Relevant Difference Test
Normal Approximation of Control and Experimental Proportions
Distribution of Estimated Arm Proportions
de
nsity
-0.2 0.0 0.2 0.4 0.6 0.8 1.0 1.2
01
23
4
ControlExperimentalk
d 0.2n 168
icc 0.04Power0.634
= e – c .01 .20 .60
Power .063 .634 1.000
Effect of Difference in Proportions
Normal Approximation of Control and Experimental Proportions
Distribution of Estimated Arm Proportions
dens
ity
-0.2 0.0 0.2 0.4 0.6 0.8 1.0 1.2
01
23
4
ControlExperimentalk
d 0.01n 168
icc 0.04Power0.063
Normal Approximation of Control and Experimental Proportions
Distribution of Estimated Arm Proportions
dens
ity
-0.2 0.0 0.2 0.4 0.6 0.8 1.0 1.2
01
23
45
ControlExperimentalk
d 0.6n 168
icc 0.04Power 1
.02 .04 .10
Power .792 .634 .381
Effect of Intra-Class Correlation on Power
Normal Approximation of Control and Experimental Proportions
Distribution of Estimated Arm Proportions
dens
ity
-0.2 0.0 0.2 0.4 0.6 0.8 1.0 1.2
01
23
45
ControlExperimentalk
d 0.2n 168
icc 0.02Power0.792
Normal Approximation of Control and Experimental Proportions
Distribution of Estimated Arm Proportions
de
nsi
ty
-0.2 0.0 0.2 0.4 0.6 0.8 1.0 1.2
01
23
ControlExperimentalk
d 0.2n 168
icc 0.1Power0.381
Test 2-sided 1-sided
Power .634 .745
Effect of One or Two Sided Tests
Normal Approximation of Control and Experimental Proportions
Distribution of Estimated Arm Proportions
dens
ity
-0.2 0.0 0.2 0.4 0.6 0.8 1.0 1.2
01
23
4
ControlExperimentalk
d 0.2n 168
icc 0.04Power0.634
Normal Approximation of Control and Experimental Proportions
Distribution of Estimated Arm Proportions
dens
ity
-0.2 0.0 0.2 0.4 0.6 0.8 1.0 1.2
01
23
4
ControlExperimentalk
d 0.2n 168
icc 0.04Power0.745
n 42 168 336
Power .209 .634 .903
Sample Size Effect on Power
Normal Approximation of Control and Experimental Proportions
Distribution of Estimated Arm Proportions
dens
ity
-0.2 0.0 0.2 0.4 0.6 0.8 1.0 1.2
0.0
0.5
1.0
1.5
2.0
ControlExperimentalk
d 0.2n 42
icc 0.04Power0.209
Normal Approximation of Control and Experimental Proportions
Distribution of Estimated Arm Proportions
dens
ity
-0.2 0.0 0.2 0.4 0.6 0.8 1.0 1.2
01
23
45
6
ControlExperimentalk
d 0.2n 336
icc 0.04Power0.903
The Power(d) function of selected sample size, n
d= pe – pc
The units in the experimental and control arms are considered independent the variance of d is the sum the
I estimated the overestimated the variance using p=.5 in the variance calculation
Power function of Difference
Some Power (d) curvesPower Function of difference between two Proportions
Difference in Proportions
Po
we
r(d
iffe
ren
ce
)
0.0 0.2 0.4 0.6 0.8 1.0
0.0
0.2
0.4
0.6
0.8
1.0
Power n=336Power n=168Power n=84Power n=42Power n=21
•Colostomy rates
• vary widely (0 to 68%) in Ontario Hosp 10+ cases
• average 32.5%
• icc calculated icc=.039989 based on our sample
Permanent Colostomy Rates
Colostomy Rates in OntarioColostomy Rate by Rectal Cancer Hospital Case Volume in Ontario
Hospital Case Volume (April 1995- March 1998 )
Co
losto
my R
ate
(%
)
0 50 100 150
02
04
06
08
01
00
• found to range from 10 to 45% by surgeon in Edmonton
• we estimate to be 20% in Ontario
• no way to estimate icc
• use 4% – consistent with the icc of other colorectal cancer surgery outcomes in Ontario
i.e. operative mortality and long-term survival
Local Recurrence Rates
Theriault M, Simonovic M. Hierarchical Modeling in Cancer Outcomes. CIHR Annual Research Conference, 2003.
• surprisingly survival rates are not known
• estimated to be about 35%
• no way to estimate icc
• use 4% – consistent with the icc of other colorectal cancer surgery outcomes in Ontario
i.e. operative mortality and long-term survival
• Cox proportional modelling is much more efficient than modeling of fixed term survival binomial outcome
Long-term Survival Rate
Theriault M, Simonovic M. Hierarchical Modeling in Cancer Outcomes. CIHR Annual Research Conference, 2003.
• icc = .04
• cluster size m=42
• Test level =05 is standard
• Reviewers demand 2-sided test
• Power =.8 to .9 is standard, we use .8
• We selected the calculated sample size of local recurrence: n=336 and k=8 hospitals in each arm
Samples Size Inputs
Sample Size Requirements
Outcome c e d n k
Colostomy .30 .15 -.15 311 7.4
Recurrence .20 .08 -.12 336 8.0
5-yr Survival .35 .50 .15 440 10.5
Summary
• ICC has a huge impact on Power and hence on required sample size
• Key parameters to calculate sample size must be estimated, i.e. and for these outcomes has not been published
• Grant reviewers demand 2-sided until the direction of effect is well established
• Room for more work in applying these in medical research