behind the image dicom, pacs and veterinary radiology · image dicom, pacs and ... –typically...
TRANSCRIPT
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The
MedicineBehind the
Image
DICOM, PACS andDICOM, PACS andVeterinary RadiologyVeterinary Radiology
Dr. David A. Clunie, MB.,BS., FRACRChief Technology Officer
RadPharm, Inc.
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OverviewOverview
• Why Digital ?• PACS and the need for DICOM• What is DICOM ?• Veterinary-specific gaps and issues• DICOM and workflow• DICOM and consistency of appearance
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Why Digital ?Why Digital ?• Images: fidelity and flexibility
– CT, MR, PET, NM and now US are digital to start with– CR and Digital X-Ray replacing film also– Printing to film involves loss of information and quality
• Efficiency– Storage (less bulk, ease of transport)
• Multiple simultaneous access– Fewer repeats for lost film– Copying film leads to substantial quality loss
• Review, search and analysis– More powerful visualization and analysis tools– Quantitation of values, segmentation, registration
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Image TransferImage Transfer
Network
Media
Film
Convert
CT, MR …
StandardFormatImages
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AnalogMedia
Network
Internet
Wireless
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Deployment ScenariosDeployment Scenarios
• Within local office or facility only– Take advantage of digital quality– Softcopy reading– Avoid storing film– Storage of priors from previous visits for comparison– From small to large facility, even one modality and one
workstation
• Between facilities, providers or patients/owners– Referrals to specialist facilities– Referral to or consultation with other providers (teleconsultation)– CD to give to patient/owner (for next time, or just for interest)
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Simplest CaseSimplest Case
WorkstationModality
ImagesLAN
Long term storage+ backup
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Local StorageLocal Storage
WorkstationModalityArchive
Query
Images
ImagesLAN
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Remote AccessRemote Access
WorkstationModalityArchive
Query
Images
ImagesHospital Office
Internet, VPN(Secure DICOM)
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Off-site ArchivalOff-site Archival
Modality
Proxy
Query
Images
Hospital Off-site Archive
Internet, VPN(Secure DICOM)
ArchiveWorkstation
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Off-site Archival -Off-site Archival -Replication, Load SharingReplication, Load Sharing
Hospital Off-site Archive 1
Internet, VPN(Secure DICOM)
Off-site Archive 2
Query
Images
Modality
Proxy
Workstation
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Application Service ProviderApplication Service Provider
Modality
Proxy
Hospital Service 1
Internet(Secure DICOM,Web)
Service 2Workstation
PC Web PC Web
Home
Clinic
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PACSPACS
• All these scenarios fall under the general categoryof PACS - Picture Archiving and CommunicationSystem
• Smallest - “mini-PACS”• Large PACS• Integrated and federated PACS• Multi-modality PACS• Multi-specialty PACS (radiology, cardiology)
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PACS BeginningsPACS Beginnings
• Lemke, 1979– “A network of Medical Workstations for Integrated
Word and Picture Communication in Medicine”
• Capp, 1981– “Photoelectronic Radiology Department”
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1982 - 1982 - ““The year of PACSThe year of PACS””
• First International Conference andWorkshop on Picture Archiving andCommunications Systems, SPIE, NewportBeach
• First International Symposium on PACSand PHD (Personal Health Data), JapanAssociation of Medical ImagingTechnology
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Who named PACS ?Who named PACS ?
• Debate in 1982 meeting as to whether to use“image” or “picture”
• Initial conference name was “DistributedComputerized Picture Information Systems(DCPIS)”
• André Duerinckx writes in 1983 SPIE paper thathe coined the term in summer of 1981
• Others have attributed it variously; Sam Dwyerallegedly attributes it to Judith M. Prewitt
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What does PACS mean ?What does PACS mean ?
• Physics and Astronomy ClassificationScheme
• Political Action Committee(s)• Pan-American Climate Studies• Picture Archiving and Communication
System
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What PACS means to you ?What PACS means to you ?
• Multi-modality digital acquisition• Storage• Distribution, locally and remotely• Display• Reporting creation, distribution, storage• Workflow management• Integration with other information (systems)• Integration of equipment from multiple vendors
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PACS in 1982 ?PACS in 1982 ?
• Pretty much the same• Less ambitious in scope• Not all modalities (CR not yet available)• More emphasis on storage, transfer and display
than workflow• No standards, but recognition of the need for them• Relatively impractical given technology of the day• A grand vision for the future
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Major PACS ErasMajor PACS Eras
• 1980’s– Evolution of concepts, technologies, prototypes and
installation of mini-PACS• 1990’s
– Practical deployment of “Large Scale PACS”– Development and adoption of standards
• 2000’s– Noticeable increase in market penetration– Increasing “commoditization” of PACS
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So what has changed ?So what has changed ?
• Driving forces– Less emphasis on cost savings from eliminating films– Greater emphasis on productivity and quality of care– Organizational benefit, not just radiology department
• Underlying technology infrastructure– Faster networks, bigger disks, better displays– Cheaper
• Users have created a demand– Vendors have responded
• Complexity better understood– Exceptional cases better supported– Focus on workflow management
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Some of the challengesSome of the challenges• Integration of modalities beyond radiology into a single
infrastructure– Visible light– Cardiology– Nuclear medicine
• Specific application support– PACS workstations “dumb” - viewing not processing & analysis
• Growing volume of data per study– Challenges storage, communication and display technology/design
• Security infra-structure integration• Electronic medical record integration
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AcquisitionAcquisition
• Early PACS required– Proprietary connections to digital modalities– Video frame-grabbing of CT and MR– Film digitization (initially no CR)
• Computed Radiography– Introduced by Fujifilm 1983– Originally intended to print to film
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Acquisition - StandardsAcquisition - Standards• Proprietary connections
– Not scalable– Too expensive– Single vendor for PACS and all modalities implausible
• 1983 ACR-NEMA Committee– American College of Radiology– National Electrical Manufacturer’s Association
• 1985 ACR-NEMA Version 1.0• 1988 ACR-NEMA Version 2.0• 50 pin plug point-to-point interface (no network, no files)• Tag-value pairs of data elements
– Describing acquisition and identifying patient
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Acquisition - StandardsAcquisition - Standards
• Post-ACR-NEMA PACS and Modalities– Several vendors used ACR-NEMA ideas in proprietary networks– Siemens-Philips SPI– ACR-NEMA as a file format
• 1982 Interfile for Nuclear Medicine– AAPM– European COST-B2 project
• By 1990’s still no widely adopted standard for– Specific modality requirements for all modalities– Network based transport and services
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Acquisition - DICOMAcquisition - DICOM• 1993 - Digital Imaging and Communications in Medicine• Network-based
– TCP/IP over Ethernet
• Services for– Storage (transfer)– Query and retrieval– Printing
• Derived from ACR-NEMA• Added concepts of modality-specific information objects• Conformance requirements and statement• Interchange file format and media quickly added (1995)
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DICOM Mini-PACSDICOM Mini-PACS
CT Modality
Laser Printer
Shared Archive
Workstation
Store
Store
Store
Q/R
Q/R
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DICOM and the PACSDICOM and the PACS
Modality
ArchiveModality
Modality
Modality
PACS +/- RIS
Manager
Workstations
Standard Boundary
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DICOM and the PACSDICOM and the PACS
Modality
ArchiveModality
Modality
Modality
PACS +/- RIS
Manager
Workstations
Standard Boundary Standard Boundary
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1993 DICOM Image Objects1993 DICOM Image Objects
• Computed Radiography• Computed Tomography• Magnetic Resonance Imaging• Nuclear Medicine• Ultrasound• Secondary Capture
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2005 DICOM Image Objects2005 DICOM Image Objects• Computed Radiography• Computed Tomography• Magnetic Resonance Imaging• Nuclear Medicine• Ultrasound• Secondary Capture• X-Ray Angiography• X-Ray Fluoroscopy• Positron Emission Tomography• Radiotherapy (RT) Image• Hardcopy Image• Digital X-Ray
• Digital Mammography• Intra-oral Radiography• Visible Light Endoscopy & Video• VL Photography & Video• Visible Light Microscopy• Multi-frame Secondary Capture• Enhanced MR• MR Spectroscopy• Raw Data• Enhanced CT• Enhanced XA/XRF• Ophthalmic Photography
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2005 DICOM Non-Images2005 DICOM Non-Images
• Radiotherapy (RT) Structure Set, Plan, Dose, Treatment Record• Waveforms (ECG, Hemodynamic, Audio)• Grayscale, Color and Blending Presentation States• Structured Reports• Key Object Selection• Mammography and Chest Computer Assisted Detection (CAD)• Procedure Log• Spatial Registration and Fiducials• Stereometric Relationship
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What about other standards?What about other standards?
• Pure imaging standards (TIFF, JPEG, etc.)– limited support for medical image types– don’t encode domain specific information
• Other domains inappropriate– military, remote sensing, astronomical, etc.
• ISO standards (e.g., IPI) never adopted• Other medical standards don’t do images
– HL7, P1073, etc
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What kinds of images ?What kinds of images ?
• Characteristics– grayscale, indexed color or true color– 8 or 16 bit– signed or unsigned
• Domain (modality specific)– CT, MR, CR, DR, XA, XRF, US, NM, PET– Microscopy, endoscopy, fundoscopy ...
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Key goals of DICOMKey goals of DICOM
• Support interoperability– NOT interfunctionality– WITHOUT defining (restricting) architecture
• Define conformance– specific services and objects– documentation (Conformance Statement)– negotiation
• Voluntary compliance
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DICOM does DICOM does NOT NOT define:define:
• PACS or Image Management Architecture• Distributed Object Management• Radiology/Hospital Information System• Complete Electronic Medical Record
• These are the realm of IHE - Integrating theHealthcare Enterprise
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What is What is Interoperability Interoperability ??
• Analogy of web server/browser:– Inter-connectivity - both talk TCP/IP– Inter-operability - both talk HTTP and HTML– Inter-functionality - not guaranteed:
“versions” of HTML poorly controlled layout not constrained by HTMLavailability of proprietary extensions (plug-ins, applets)e.g., “this page only for IE version 5.0”
• Good, but not good enough for healthcare
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DICOM and DICOM and InteroperabilityInteroperability
• For example, conformance to DICOM– will guarantee network connection– will guarantee storage of MR image:
from Modality to Workstation– will NOT guarantee (but will facilitate):
Workstation will display image “correctly”Workstation can perform the analysis the user wants
– facilitated by mandatory attributes for: identification, annotation, positioning, etc.newer DICOM objects increase what is mandatory
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DICOM and DICOM and InteroperabilityInteroperability
• Object oriented definition– data structures, e.g., MR image object
composite model of real world entities– patient, study, series– general image, specialized to MR image
– services, e.g., image storage– together => service/object pairs (SOP)
• Roles (user or provider) (SCU or SCP)• Role + SOP Class => Conformance
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DICOM SOP Classes/RolesDICOM SOP Classes/Roles
• MR scanner may say:– “I am an MR Image Storage Service Class User (SCU)”
• Workstation may say:– “I am an MR Image Storage Service Class Provider
(SCP) (amongst other things)”
MR images may be transferred
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DICOM SOP Classes/RolesDICOM SOP Classes/Roles
• Angiography device may say:– “I am an XA Image Storage Service Class User (SCU)”
• Workstation may say:– “I am not an XA Image Storage Service Class Provider
(SCP) (though I do support other kinds of images likeCT and MR)”
This pair cannot transfer XA images
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Why is DICOM so specific ?Why is DICOM so specific ?
• For example,– MR Image
single frame, 12-16 bit grayscale imageMR acquisition - pulse sequence parameters3D patient relative co-ordinate/vector position
– X-Ray Angiography Imagemulti-frame, 8-10 bit grayscale imageXA acquisition - radiation/collimation/motionDynamic C-arm/table relative positioning
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DICOM SOP Classes/RolesDICOM SOP Classes/Roles
• Workstation may say:– “I am a Basic Grayscale Print Management Meta SOP
Class SCU”
• Printer may say:– “I am a Basic Grayscale Print Management Meta SOP
Class SCP”
Images may be printed
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DICOM SOP Classes/RolesDICOM SOP Classes/Roles
• Ultrasound scanner may say:– “I am a Basic Color Print Management Meta SOP Class
SCU”
• Printer may say:– “I am only a Basic Grayscale Print Management Meta
SOP Class SCP”
This pair cannot print images
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DICOM ConformanceDICOM Conformance
• Capabilities defined a priori in the mandatoryDICOM Conformance Statement– Allows users/other vendors/integrators to plan effectively
• Capabilities negotiated live on the network– Association Establishment phase before transfer– Allows ad hoc networks to be setup and configured– Allows devices to explore capabilities and change behavior
dynamically (e.g., SCP doesn’t support DX so fall back to CRimage transfer)
– Allows negotiation of compression transfer syntaxes (mandatoryuncompressed default)
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DICOM PenetrationDICOM Penetration• Acquisition modality
– cannot buy a digital radiology modality that does not at least have DICOMimage transfer
– typically will have DICOM print and workflow services (modalityworklist) as well
– many starting to support DICOM Structured Reports for export ofmeasurements (e.g., cardiac and obstetric ultrasound)
• PACS– cannot buy a PACS that will not accept DICOM images– vast majority will support DICOM queries– many supply worklist services to modalities
• Printers– cannot buy a medical printer that does not support DICOM
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DICOM and VeterinaryDICOM and Veterinary
• Re-use of human acquisition modalities• Veterinary-specific modalities• General purpose PACS and workstations• Veterinary PACS and workstations• Veterinary information systems
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DICOM Gaps for VeterinaryDICOM Gaps for Veterinary
• Animal identification• Animal characteristics• Positioning and anatomy• Procedure classification
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Identification & CharacteristicsIdentification & Characteristics
• Human– Patient name and ID– Fixed attributes - sex, DOB– At time of study - age, height, weight (rarely ethnicity,
etc.)
• Animal– Animal name and ID– Fixed attributes - sex, DOB, but also species, breed– At time of study - owner, neutered, breed registry ID
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Identification & CharacteristicsIdentification & Characteristics
• What needs to be stored in the image “header”rather than elsewhere ?– Reliable identification– Information required for display to allow interpretation– Do not try to bury entire medical record in the image
• Strategy– Re-use existing DICOM attributes as appropriate, e.g., Patient
Name and ID to store animal’s name and ID– Add new optional attributes to existing DICOM image definitions,
or conditional upon subject being an animal, e.g. Owner– Use codes rather than free text wherever possible and practical
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Identification & CharacteristicsIdentification & Characteristics
• Current proposal being considered by WG 25 …
• Owner (one person; ? need for multiple, for organization)• Neutered (yes/no)• Species Code Sequence (one item allowed)• Breed Code Sequence (one or more items allowed)• Breed Description (free text)• Breed Registry Sequence (one or more items, for multiple registries)
– Registration Number– Breed Registration Authority Code Sequence (1 item allowed)– Breed Registration Authority Description (in case no code for naming the registry)
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Codes versus FreeCodes versus Free TextText
• Enumerated values:– Neutered - values of YES, NO - nothing else permitted
• Free text operator entry, e.g., of species:– “dog”, “canine”, “K9”– makes searching for all “dog” images difficult
• Coded sequences - pull-down lists in UI– Coding scheme - “SRT” (SNOMED)– Code value - “L-80700”– Code meaning - “Canine species”
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CodesCodes• Re-use work of outside organizations like SNOMED
– SNOMED already has veterinary content and relationships withprofessional organizations like AVMA
– Cost and licensing issues - DICOM has a relationship that allows licenseand royalty free use of codes used in DICOM - also free in US for now
• Species– Relatively short list and relatively complete in existing coding schemes
• Breed– Very long list and moderately complete in existing coding schemes– Will need work to maintain, e.g. as new “breeds” emerge like “puggle”,
“cockapoo”, “speagle”, “labradoodle” …– Will always need free text alternative for new and mixed breeds,
especially those owners feel strongly about but are not generally accepted,e.g., “Polish warmblood”
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Anatomy IssuesAnatomy Issues• DICOM anatomy
– Body Part Examined list of string terms or free text E.g., “CHEST” or “BRAIN” or “WRIST”
– Anatomic Region Sequence SNOMED codes - broad range of granularity Re-use human codes - add sufficient new veterinary codes
• Vendors and operators often send no such information– Typically embedded in free text Study or Series Description– E.g., Study Description = “CT Chest/Abdomen and Pelvis”– E.g., Series Description = “Left wrist lateral”– Inadequate anatomic information compromises ability to position and
orient (hang) images properly for display
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Positioning IssuesPositioning Issues
• Standard human anatomic position• Quadrupeds similar, but different• Less of an issue for projection radiography
– Views and labels manually chosen– Does affect how images are oriented (hung) for display
• Cross-sectional (CT and MR) positioning– Practical positioning of anesthetized animal on table– Especially head and limbs
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Sagittal Sagittal PositioningPositioning
• Human– Likely positioned in gantry supine– Nose is anterior (ventral)– Vertex is towards head (craniad)
• Dog– Likely positioned in gantry prone– Nose is towards head (craniad)– Vertex is posterior (dorsal)
P
H
A
H
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Sagittal Sagittal PositioningPositioning
P
F
P
F
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Sagittal Sagittal PositioningPositioning
P
F
F
A
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Positioning IssuesPositioning Issues
• Who cares ?• Left versus right side not likely affected• Default assumptions of display software
– “human” software - may have to rotate/flip each time
• Consistency of 3D software– As long as coordinate system is consistent, not issue– 3D navigation tools awkward if human assumptions
• Inconsistency between vendors if not defined inadvance by a standard
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DICOM Standard PositionsDICOM Standard Positions
• DICOM PS 3.17 Annex A• Illustrations of interpretation of orientation
– L v. R (left or right)– A v. P (anterior, ventral or posterior, dorsal)– H v. F (towards head, craniad, rostral or foot, caudad)
• Limbs– Palmar, plantar = A (anterior, ventral) in humans
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Head (H)
Posterior (P)
Left (L)
(R) Right
(A) Anterior
Feet (F)
The standard anatomic position is standing erect with the palms facing anterior. This position is used to define a label for thedirection of the fingers and toes (toward the Feet (F) while the direction of the wrist and ankle is towards the Head (H). Thislabeling is retained despite changes in the position of the extremities. For bilaterally symmetric body parts, a lateralityindicator (R or L) should be used.
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Head (H)
Posterior (P)
Left (L)
(R) Right
(A) Anterior
Feet (F)
The standard anatomic position is standing erect with the palms facing anterior. This position is used to define a label for thedirection of the fingers and toes (toward the Feet (F) while the direction of the wrist and ankle is towards the Head (H). Thislabeling is retained despite changes in the position of the extremities. For bilaterally symmetric body parts, a lateralityindicator (R or L) should be used. From Dr. Patricia Rose’s web site at
http://www.upei.ca/~vca341/
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Head (H)
Posterior (P)
Left (L)
(R) Right
(A) Anterior
Feet (F)
The standard anatomic position is standing erect with the palms facing anterior. This position is used to define a label for thedirection of the fingers and toes (toward the Feet (F) while the direction of the wrist and ankle is towards the Head (H). Thislabeling is retained despite changes in the position of the extremities. For bilaterally symmetric body parts, a lateralityindicator (R or L) should be used. From Dr. Patricia Rose’s web site at
http://www.upei.ca/~vca341/
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Head (H)
Posterior (P)
Left (L)
(R) Right
(A) Anterior
Feet (F)
The standard anatomic position is standing erect with the palms facing anterior. This position is used to define a label for thedirection of the fingers and toes (toward the Feet (F) while the direction of the wrist and ankle is towards the Head (H). Thislabeling is retained despite changes in the position of the extremities. For bilaterally symmetric body parts, a lateralityindicator (R or L) should be used. From Dr. Patricia Rose’s web site at
http://www.upei.ca/~vca341/
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Feet
Right
Left
(Left Hand)
Head
Head
PosteriorAnterior
Feet
For the hands, the direction labels are based on the standardanatomic position. For the left hand illustrated for example,LEFT will always be in the direction of the thumb, irrespectiveof position changes.
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P
L
From Dr. Patricia Rose’s web site athttp://www.upei.ca/~vca341/
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A
F
?
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A
F
?
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VeterinaryVeterinary Action ItemsAction Items
• Describe standard anatomic positions– for appropriate subset of species
• Describe appropriate interpretation of rowand column direction for standardradiographic projections
• Enumerate coded lists of standardprojections– facilitates correct automatic population of orientation
attributes without operator intervention
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DICOM 3D CoordinatesDICOM 3D Coordinates
• “Frame of Reference” defines origin– Fixed but arbitrary, set by operator
• Cartesian space (orthogonal X, Y, Z)• Units are mm• Every slice
– Position relative to origin (3 points)– Orientation of row and column directions (unit vectors)
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TLHC pixel - offset from origin 0\0\16.5
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1\0\0
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1\0\0
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1\0\0
0\-1\0
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3D Relationships3D Relationships
ReconstructionInterval
OrthogonalMulti-planar
Reconstruction(MPR)
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3D Relationships3D Relationships
ReconstructionInterval
3D Projection(MIP, Volume,
Surface Rendering)
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MeasurementsMeasurements
• Distance– Pixel Spacing - in cross-sectional modalities– Imager Pixel Spacing - in projection modalities
• Pixel values– Hounsfield Units in CT– Velocity, etc, in MR– Region Calibration in Ultrasound
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DICOM PositioningDICOM Positioning
• Robust interoperable model• Agreed to and implemented by all vendors• Allows applications to function properly
regardless of source of images• Mandatory 3D and spacing information for
cross-sectional modalities• Rendering, measurement and analysis
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Veterinary Action ItemsVeterinary Action Items
• Reuse human attributes as far as possible• Redefine directions for quadrupeds• Must re-use 3D co-ordinate system since
already mandatory (and sufficient)• Will allow maximum reuse of human
software and hardware, including researchand open source applications
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Beyond Images Beyond Images …… Workflow Workflow
• What is “workflow” ?• Why is workflow important ?• Opportunities for workflow management• DICOM support for workflow management• RIS/PACS integration and workflow• IHE profiles related to workflow
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What is What is ““workflowworkflow”” ? ?
“documents, information or tasks … passedfrom one participant to another in a way that isgoverned by rules or procedures”
Workflow Management Coalitionhttp://www.wfmc.org/
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What is What is ““workflowworkflow”” ? ?
Task 1 Task 2 Task 3
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DependenciesDependencies
Task 1 Task 2 Task 3
Task 3 commencement is dependent on task 2completion, whose commencement is in turn
dependent on task 1 completion.
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Multiple tasksMultiple tasks
Task 1 Task 2a Task 3
Task 2b
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Multiple tasksMultiple tasks
Task 1a Task 2a Task 3
Task 2b
Task 1b
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Sub-tasksSub-tasks
Task 1 Task 3
Task 2a
Task 2b
Task 2c
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Workflow tasks in PACSWorkflow tasks in PACS• Image acquisition
– patient on modality– optical film scanning (outside referrals)
• Image quality control (QC)– contrast selection (window center/width)– film printing
• Image processing– 3D (surface rendering, volume rendering, angio MIP)– Computer Assisted Diagnosis/Detection (Chest/Mammo CAD)
• Reporting– single step (voice recognition or structured application)– dictate/transcribe/correct/verify (sub-tasks)
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Managing TasksManaging Tasks
• Inputs– what is needed before task can begin ?
• Outputs– what are the products delivered on completion ?
• Resources allocated– what personnel and equipment and consumables ?
• State– have we started or finished or given up ?
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Interpretation TaskInterpretation Task
• Inputs– current images– previous studies’ images and reports
• Outputs– report (with references to images)
• Resources allocated– individual or category of interpreting radiologist– specific workstation or category of workstation
• State– scheduled/in progress/discontinued/completed
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Acquisition TaskAcquisition Task• Inputs
– patient identification and location– study identifiers– request information– [previous studies’ images and reports]
• Outputs– images and presentation states (+/- measurements in structured reports)
• Resources allocated– individual or category of performing radiologist– specific scanner or category of scanner
• State– scheduled/in progress/discontinued/completed
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WorklistsWorklists
• Tasks are listed in a “worklist”• Each worklist entry contains:
– input information– resource information– implicit or explicit “scheduled” state
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Task 2Task 2Task 2Task 1Task 1
WorklistsWorklists
Task 1 Task 2
Worklist 11.11.21.3….
Worklist 22.12.22.3….
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Task 2Task 2Task 2Task 1Task 1
““Closing the loopClosing the loop””
Task 1 Task 2
Worklist 11.11.21.3….
Worklist 22.12.22.3….
?
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Task 2Task 2Task 2Task 1Task 1
Workflow ManagerWorkflow Manager
Task 1 Task 2
Worklist 11.11.21.3….
Worklist 22.12.22.3….
“the cloud” - RIS ? PACS ? Workflow System ?
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Task 1Task 1
Workflow and DICOMWorkflow and DICOM
Task 1
Worklist 11.11.21.3….
Scheduled Procedure Steps (SPS)
Performed Procedure Steps (PPS)
Each “instance” of a task is a“procedure step” (an entry on a
worklist)
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Relationship of StepsRelationship of Steps
ScheduledProcedure
Step
PerformedProcedure
Step
•Inputs•Resources•State: scheduled
•Outputs•Consumables•State
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Relationship of StepsRelationship of Steps
ScheduledProcedure
Step
PerformedProcedure
Step1:1 ?
Scheduled procedure step: scan chest/abdomen/pelvis Performed procedure step: scanned chest/abdomen/pelvis
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Relationship of StepsRelationship of Steps
ScheduledProcedure
Step 1:n
Scheduled procedure step: scan chest/abdomen/pelvis Performed procedure step: scanned chestPerformed procedure step: scanned abdomen/pelvis
PerformedProcedure
Step
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Relationship of StepsRelationship of Steps
ScheduledProcedure
Step n:1
Scheduled procedure step: scan chestScheduled procedure step: scan abdomen/pelvis Performed procedure step: scanned chest/ abdomen/pelvis
PerformedProcedure
Step
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Relationship of StepsRelationship of Steps
0:1
unscheduled examination
PerformedProcedure
Step
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Relationship of StepsRelationship of Steps
ScheduledProcedure
Step n:m
PerformedProcedure
Step
General case is n:m, where n and m may both be zero
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DICOM and WorkflowDICOM and Workflow
• Modality Worklist– schedule of activity on modality– supply RIS/PACS assigned identifiers to modality– reduce errors inherent in operator re-entry– improve matching of images/requests on PACS
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DICOM and WorkflowDICOM and Workflow
• Modality Worklist• Modality Performed Procedure Step
– provide status to RIS/PACS (“close the loop”)– summary of results: how many and which images– allows RIS/PACS to check that all were received prior
to assigning for read
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DICOM and WorkflowDICOM and Workflow
• Modality Worklist• Modality Performed Procedure Step• General Purpose Worklist/Procedure Step
– initiated to address need for interpretation worklists– generic nature of tasks recognized– need to support other applications, e.g. CAD
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General Purpose General Purpose WorklistWorklist
• List of inputs– images and other composite objects (reports)
• Scheduled steps have status– scheduled vs. in progress
• Tasks are coded– “interpretation”– “image processing”– …
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DeploymentDeployment
• Which system manages the workflow ?• Where does the information come from ?• Which standards are appropriate ?• Can there be interoperability ?
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Modality Modality WorklistWorklist
• HIS/RIS sent HL7 ADT +/- OE messages• Interface box (broker) maintains a database• Modality implements DICOM MWL SCU• Interface box acts as MWL SCP
• When to remove worklist entries ?• What about MPPS ?
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Modality Modality WorklistWorklist
• Benefits beyond managing workflow• Worklist provides inputs to modality
– reliable patient identifiers - don’t need to be typed in– reliable study identifiers - match to the request
• Identifiers are then used in images• Images can then be matched later in PACS
– with the request– with prior images– with prior reports– with the rest of the electronic medical record
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Modality Performed PSModality Performed PS
• Interface box or other MWL SCP wants toknow when to remove MWL entries
• Who else cares ?• Is PACS/RIS ready to receive MPPS to
begin report scheduling ?• Does MPPS have to be sent to more than
one device by modality ?
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Worklist Worklist for Interpretationfor Interpretation
• Until now either:– proprietary worklist within RIS/PACS– normal query for “available” studies– “pushed” in advance to where radiologist is expected
• Use DICOM General Purpose Worklist• Workstations must implement SCU• PACS/RIS must implement SCP
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Integrating the HealthcareIntegrating the HealthcareEntreprise Entreprise (IHE)(IHE)
• “Acquisition Modality”: MWL/MPPS SCU• MWL provided by “Order Filler” actor• MPPS distributed by “PPS Manager” actor
– to “Order Filler” actor– to “Image Manager” actor
“Scheduled Workflow Integration Profile”
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IHE and ReportingIHE and Reporting
• Reports are currently standalone• Encoded in DICOM Structured Reports• Actors: creator/manager/repository/reader• No workflow integration of reporting as yet• Maybe next year using GP WL/PPS?
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DeploymentDeployment
• Which system manages the workflow ?– RIS or PACS or combination of the two
• Where does the information come from ?– acquisition task needs order/scheduling information
• Which standards are appropriate ?– combination of DICOM and HL7
• Can there be interoperability ?– IHE has shown the way for MWL/MPPS– remains to be seen if interpretation can be included
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Veterinary Actions ItemsVeterinary Actions Items
• Extend DICOM Modality Worklist to includeveterinary identifiers and attributes– Owner, Neutered, Species, Breed, etc.
• Extend IHE rules for copying identifiers fromworklist into images to include veterinaryattributes
• Start IHE Veterinary domain• Evaluate needs for veterinary reporting content
and workflow
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Distributed ImageDistributed ImageConsistencyConsistency
• Inconsistent appearance of images– Why is it a problem ?– What are the causes ?
• Grayscale Standard Display Function– The DICOM solution to the problem– How it works– How to implement it
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Distributed ImageDistributed ImageConsistencyConsistency
Digital Modality
Workstation
Laser Printer
Workstation
Identical perceived contrast
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Distributed ImageDistributed ImageConsistencyConsistency
Digital Modality
Workstation
Laser Printer
Workstation
Identical perceived contrast
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Distributed ImageDistributed ImageConsistencyConsistency
Digital Modality
Workstation
Laser Printer
Workstation
Identical perceived contrast
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Distributed ImageDistributed ImageConsistencyConsistency
Digital Modality
Workstation
Laser Printer
Workstation
Identical perceived contrastand color !!
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What about color ?What about color ?
• Consistency is less of an issue:– US/NM/PET pseudo-color; VL true color ??
• Consistency is harder to achieve– Not just colorimetry (i.e. not just CIELAB)– Scene color vs. input color vs. output color– Gamut of devices much more variable– Greater influence of psychovisual effects
• Extensive standards efforts e.g., ICC• All color DICOM images now include optional
ICC profile, and there is a Color Presentation State
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Problems of InconsistencyProblems of Inconsistency
• VOI (window center/width) chosen on onedevice but appears different on anotherdevice
• Not all gray levels are rendered or areperceivable
• Displayed images look different fromprinted images
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Problems of InconsistencyProblems of Inconsistency
mass visible mass invisible
•VOI (window) chosenon one display device
•Rendered on anotherwith different display
•Mass expected to beseen is no longer seen
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Problems of InconsistencyProblems of Inconsistency
0.5
1.5
1.0
3.0
•Not all display levelsare perceivable on alldevices
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Problems of InconsistencyProblems of Inconsistency
0.5
1.5
1.0
3.0
•Not all display levelsare perceivable on alldevices
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Problems of InconsistencyProblems of Inconsistency
Digital Modality Laser Printer
•Printed images don’t looklike displayed images
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Causes of InconsistencyCauses of Inconsistency
• Gamut of device– Minimum/maximum luminance/density
• Characteristic curve– Mapping digital input to luminance/density– Shape– Linearity
• Ambient light or illumination
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Causes of InconsistencyCauses of Inconsistency
1.0 .66
•Display devicesvary in the maximumluminance they canproduce
•Display CRT vs. filmon a light box is anextreme example
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Monitor CharacteristicMonitor CharacteristicCurvesCurves
Monitor Characteristic Curve
0.1
1
10
100
0 50 100 150 200 250 300Digital Driving Level
Ambient Light
MaximumLuminance
Gamma
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Towards a StandardTowards a StandardDisplayDisplay
• Can’t use absolute luminance since displaycapabilities different
• Can’t use relative luminance since shape ofcharacteristic curves vary
• Solution: exploit known characteristics ofthe contrast sensitivity of human visualsystem - contrast perception is different atdifferent levels of luminance
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Human Visual SystemHuman Visual System
• Model contrast sensitivity– assume a target similar to image features– confirm model with measurements– Barten’s model
• Grayscale Standard Display Function:– Input: Just Noticeable Differences (JNDs)– Output: absolute luminance
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Standard Display FunctionStandard Display Function
.01
.1
1
10
100
1000
0 200 400 600 800 1000
Grayscale Standard Display Function
JND Index
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Standard Display FunctionStandard Display Function
.01
.1
1
10
100
1000
0 200 400 600 800 1000
Grayscale Standard Display Function
JND Index
Monitors
Film
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Perceptual LinearizationPerceptual Linearization
• JND index is “perceptually linearized”:– same change in input is perceived by the human
observer as the same change in contrast
• Is only a means to achieve deviceindependence
• Does not magically produce a “better”image
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Perceptual LinearizationPerceptual Linearization
.01
.1
1
10
100
1000
0 200 400 600 800 1000
Grayscale Standard Display Function
JND Index
Same number of Just Noticeable Difference == Same perceived contrast
Despite different changein absolute luminance
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Perceptual LinearizationPerceptual Linearization
Modality
Display
Display Perception of ContrastBy Human Visual System
Ambient Light
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Using the StandardUsing the StandardFunctionFunction
• Maps JNDs to absolute luminance• Determine range of display
– minimum to maximum luminance– minimum to maximum JND
• Linearly map:– minimum input value to minimum JND– maximum input value to maximum JND– input values are then called “P-Values”
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Monitor CharacteristicMonitor CharacteristicCurveCurve
Monitor Characteristic Curve
0.1
0
10
100
0 50 100 150 200 250 300Digital Driving Level
Ambient Light
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Standard Display FunctionStandard Display Function
.01
.1
1
10
100
1000
0 200 400 600 800 1000
Grayscale Standard Display Function
JND Index
Monitor’s Capability
Jmax == P-Value of 2n-1
Jmin == P-Value of 0
Minimum Luminance+ Ambient Light
Maximum Luminance+ Ambient Light
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Standardizing a DisplayStandardizing a Display
0.1
1
10
100
0 50 100 150 200 250
DDL or P-Values
Standard
Characteristic Curve
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Standardizing a DisplayStandardizing a Display
Mapping P-Values to Input of Characteristic Curve (DDL’s)
0
50
100
150
200
250
300
0 50 100 150 200 250 300
P-Values
DDL
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Standardizing a DisplayStandardizing a Display
Standard Display Function
P-Values: 0 to 2n-1
StandardizedDisplay
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Device Independent ContrastDevice Independent Contrast
Standard Display Function
P-Values: 0 to 2n-1
Standard Display Function
StandardizedDisplay B
StandardizedDisplay A
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So what ?So what ?
• Device independent presentation of contrastcan be achieved using the DICOMGrayscale Standard Display Function tostandardize display and print systems
• Therefore images can be made to appear thesame (or very similar) on different devices
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So what ?So what ?
• Images can be made to appear not onlysimilar, but the way they were intended toappear, if images and VOI are targeted to aP-value output space
• New DICOM objects defined in P-values• Old DICOM objects and print use new
services (Presentation State and LUT)
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Not so hard Not so hard ……
• If you calibrate displays / printers at all, youcan include the standard function
• If you use any LUT at all, you can make itmodel the display function
• If you ignore calibration & LUTs totally(use window system defaults) results will beinconsistent, mediocre and won’t use thefull display range