bb10a: cells, biomolecules & genetics 2003-04 semester 1 tuesday 30 sept. lecture 3 biomolecules...

47
BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 • Biomolecules & their interactions with Water • Andrew Pearson

Upload: emely-limehouse

Post on 28-Mar-2015

216 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

BB10A: Cells, Biomolecules & Genetics2003-04 Semester 1

• Tuesday 30 Sept.• Lecture 3

• Biomolecules & their interactions with Water

• Andrew Pearson

Page 2: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Life on our planet has evolved to cope with a predominantly aqueous environment:

roughly 70% of theEarth’s surface & animalbodies are H2O

Biomolecules & their interactions with Water

Page 3: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

The properties of H2O have thereforehad a powerful effect upon the forces ofnatural selection at the level of the

Biomolecule.

Let us look at some properties of H2O.

Biomolecules & their interactions with Water

Page 4: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 5: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 6: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

In contrast to “hydrophobic”substances, many biochemicallyimportant ions and molecules areso “hydrophilic” that Osmoticpressure results.

Biomolecules & their interactions with Water

Page 7: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 8: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Another important property of H2O is it’s ability to dissociate into botha weak acid and a weak base.

Biomolecules & their interactions with Water

Page 9: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 10: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 11: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

The effect of water upon naturalselection is quite marked even atthe molecular level:

the case of the most abundantbiosynthesised molecule,

Glucose.

Biomolecules & their interactions with Water

Page 12: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 13: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 14: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 15: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 16: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Proteoglycan aggregate

Chondroitin sulphateKeratan sulphate

HyaluronicAcid core

Page 17: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

The less it is allowed to interact withaqueous media, the stronger a H-bondcan be.

This is important in the stability ofmacromolecules such as DNA:

Biomolecules & their interactions with Water

Page 18: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 19: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

All things naturally prefer (are more stable in) the lowestpossible energy state.

For H2O in the biosphere(i.e. between 0oC and 100oC)this means random motion, not anordered structure.

Biomolecules & their interactions with Water

Page 20: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 21: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 22: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 23: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

This effect is important in the stabilisation of biomembranes

Biomolecules & their interactions with Water

Page 24: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 25: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 26: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 27: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Relative abundances of elements in the universe

Biomolecules & their interactions with Water

Page 28: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Relative abundances of elements in Earth’s crust

Biomolecules & their interactions with Water

Page 29: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Relative abundances of elements in humans

Biomolecules & their interactions with Water

Page 30: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Universal Earth’s crustHuman bodyBiomolecules & their interactions with Water

Page 31: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 32: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Apart from photosynthesising organisms,which take energy from e/m radiation, allthe biochemical needs of the biosphere forlife come from:chemical elements, salts and moleculesfound in the lower regions of the atmosphere,the hydrosphere and the upper parts of thelithosphere.

Biomolecules & their interactions with Water

Page 33: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Ecology studies are often enhanced by under-standing how and why elements cycle through different systems in the biosphere, & recent perturbations of ecological balances by human activities have brought these matters into sharp focus.

Biomolecules & their interactions with Water

Page 34: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 35: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 36: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 37: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 38: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 39: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 40: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 41: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 42: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 43: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 44: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 45: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 46: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water

Page 47: BB10A: Cells, Biomolecules & Genetics 2003-04 Semester 1 Tuesday 30 Sept. Lecture 3 Biomolecules & their interactions with Water Andrew Pearson

Biomolecules & their interactions with Water