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i Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That , Matthew Phillips Characterisation of nitrogen acceptors in zinc oxide nanowires 1 Cuong Ton-That , Huu Hao Ngo Optimisation of Fe nano- and micro-particles for the removal of heavy metals in water 2 Matthew Arnold , Chris Poulton Modelling gap plasmons for optimal energy concentration 3 Matthew Arnold , Milos Toth Simulating the effect of bollard lattices on bacterial path-following 4 Angus Gentle , Matthew Arnold Nanocomposites for directional emission control 5 Annette Dowd , Shaoli Zhu Enhancement of Raman spectroscopy using silver nano-stars 6 Annette Dowd , Stella Valenzuela, Linda Xiao Optical spectroscopic probing of biological nanomachines: elucidating the structure of CLIC proteins in cell membrane models 7 Michael Cortie , Annette Dowd Precipitation of intermetallic phases from metastable (Pt,Ag) thin films 8 Milos Toth , Charlene Lobo Directed and emergent phenomena in chemically-assisted charged particle beam nanofabrication 9 Igor Aharonovich , Olga Shimoni Development of novel bio-markers based on fluorescent nanocrystals 10 Igor Aharonovich , Mike Ford Investigation of optically active 2D materials 11 Igor Aharonovich , Matthew Arnold Coupling single emitters to plasmonic nanostructures 12 Igor Aharonovich , Milos Toth, Olga Shimoni Controlled growth of diamond nanostructures 13 Mike Ford Designing 2D materials for the future 14 Mike Ford Super-atom materials 15 Michael Braun Heart displacement in free-breathing MR-PET image data 16 Chris Poulton Nonlinear phononic interactions in nanophotonic structures 17 Andrew McDonagh New Metal and Metal Oxide Core/Shell Nanoparticles 18 Zhimin Ao , Guoxiu Wang Atomistic simulations on graphene-based materials for hydrogen storage and in Li-ion batteries 19 Hao Liu Novel nano-structured materials for high power energy storage 20 Charles Cranfield , Annette Dowd, Stella Valenzuela Creating improved electrodes for cochlear and vision implants. 21

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Page 1: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

i

Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page

Cuong Ton-That, Matthew Phillips

Characterisation of nitrogen acceptors in zinc oxide nanowires 1

Cuong Ton-That, Huu Hao Ngo Optimisation of Fe nano- and micro-particles for the removal of heavy metals in water

2

Matthew Arnold, Chris Poulton

Modelling gap plasmons for optimal energy concentration 3

Matthew Arnold, Milos Toth Simulating the effect of bollard lattices on bacterial path-following 4

Angus Gentle, Matthew Arnold Nanocomposites for directional emission control 5

Annette Dowd, Shaoli Zhu Enhancement of Raman spectroscopy using silver nano-stars 6

Annette Dowd, Stella Valenzuela, Linda Xiao

Optical spectroscopic probing of biological nanomachines: elucidating the structure of CLIC proteins in cell membrane models

7

Michael Cortie, Annette Dowd

Precipitation of intermetallic phases from metastable (Pt,Ag) thin films 8

Milos Toth, Charlene Lobo Directed and emergent phenomena in chemically-assisted charged particle beam nanofabrication

9

Igor Aharonovich, Olga Shimoni Development of novel bio-markers based on fluorescent nanocrystals 10

Igor Aharonovich, Mike Ford Investigation of optically active 2D materials 11

Igor Aharonovich, Matthew Arnold

Coupling single emitters to plasmonic nanostructures 12

Igor Aharonovich, Milos Toth, Olga Shimoni

Controlled growth of diamond nanostructures 13

Mike Ford Designing 2D materials for the future 14

Mike Ford Super-atom materials 15

Michael Braun Heart displacement in free-breathing MR-PET image data 16

Chris Poulton Nonlinear phononic interactions in nanophotonic structures 17

Andrew McDonagh

New Metal and Metal Oxide Core/Shell Nanoparticles 18

Zhimin Ao, Guoxiu Wang

Atomistic simulations on graphene-based materials for hydrogen storage and in Li-ion batteries

19

Hao Liu

Novel nano-structured materials for high power energy storage 20

Charles Cranfield, Annette Dowd, Stella Valenzuela

Creating improved electrodes for cochlear and vision implants. 21

Page 2: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

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Page 3: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

1

Characterisation of nitrogen acceptors in zinc oxide nanowires

Cuong Ton-That, Matthew Phillips

[email protected]

Zinc oxide (ZnO) nanowires have the capability to provide the key for many nanodevice applications

due to its versatile optical and electronic properties. ZnO also possesses properties superior to its

chief competitor, Gallium Nitride (GaN) that has been widely used in light emitting diodes in recent

years. Like nitride materials, benefits of ZnO can only be realised once a reliable acceptor and

associated fabrication methods have been established.

Our recent studies have shown that ZnO nanowires doped with nitrogen by plasma annealing exhibit

the characteristics of a shallow acceptor. However, the exact chemical origin of the acceptor has not

been established. This project involves the growth of ZnO nanowires with prescribed defect

properties using chemical vapour deposition. Doped ZnO nanowires will be achieved by plasma

annealing in appropriate gaseous environments. The relationship between plasma processing

conditions and optical emissions associated with the acceptor will be investigated by advanced

microscopy and synchrotron techniques.

ZnO nanowires grown at UTS

Techniques

Plasma processing, electron microscopy, cathodoluminescence, photoluminescence, Raman, x-ray

diffraction, energy dispersive x-ray analysis

Page 4: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

2

Optimisation of Fe nano- and micro-particles for the removal of heavy

metals in water

Cuong Ton-That, Huu Hao Ngo

[email protected]

Fe particles are good adsorbents of heavy metals and metal-ligand complexes in water. Extensive

studies in Centre for Technology in Water and Wastewater (CTWW) in FEIT have proved that Fe is an

economically feasible material for the efficient removal of Pb, Cu and Zn from wastewater; however

at present the exact mechanism of aqueous contaminant removal is unknown and thus the process

cannot be optimised. It has been recognised that if the particle size and surface chemistry can be

controlled, this method is capable of removing heavy metals to much lower levels than the current

achievable level and over a wider pH range. This project involves the production of Fe nano- and

micro-particles by ball milling, the particles are thermally treated in plasma to control the surface

chemistry systematically. The processed materials will be analysed by electron microscopy, x-ray

microanalysis, Brunauer–Emmett–Teller (BET) and inductively coupled plasma atomic emission

spectroscopy (ICP-AEP) to investigate the relationship between their surface and morphological

properties and the removal efficiency of heavy metals.

This is a collaborative project that brings together interdisciplinary expertise from two research

strengths within UTS.

Techniques

Electron microscopy, x-ray diffraction, energy dispersive x-ray analysis, BET, ICP-AEP, plasma

processing, ball milling

Page 5: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

3

Modelling gap plasmons for optimal energy concentration

Matthew Arnold, Chris Poulton

[email protected]

Gap plasmons concentrate energy particularly strongly, which could be usefully exploited in

detection and energy conversion applications. While there is extensive literature on the gap

plasmons where a single metal is present, there is comparatively less on combinations of metals.

Use of dissimilar metals offers additional flexibility in tuning and possibly other advantages. The aim

of this project is to investigate a new technique to simulate the field enhancement between pairs of

common metals, and ideally develop a model that could be used to predict the optimum metals for a

given application.

Plasmon confinement between metal resonators

Techniques

This is a computer simulation project – some knowledge of computer simulations and optical

resonators would be a definite advantage. The simulations will be carried out using existing

implementations of solvers such as DDA & BEM. These large scale calculations will be run remotely

on the UTS cluster with SSH & PBS.

Page 6: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

4

Simulating the effect of bollard lattices on bacterial path-following

Matthew Arnold, Milos Toth

[email protected]

Collective motion emerges in systems such as crowds of people and bacterial colonies, and the

ability to control this motion is often desirable. Simple models for these systems have given insight

into why this behaviour occurs: for example it has been suggested that bacteria exhibit path-

following behaviour through chemical signalling (much like ant trails). One possibility for disrupting

bacterial activity is to insert barriers that establish controlled paths. The aim of this project is to use

simulations to understand how lattices of barriers might affect bacteria, by quantifying how path-

following metrics vary in response to lattice spacing and symmetry.

Sketch of bacterial pathfollowing in an artificial lattice

Techniques

This is a computer simulation and will require familiarity with computational physics and

programming, especially in Matlab. It will use an established stochastic particulate model, with

some programming required to setup up the barriers. If time or inclination permits, conversion to a

continuum fluid model could be undertaken. Learning to use a batch system such as PBS would be a

desirable outcome of this project.

Page 7: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

5

Nanocomposites for directional emission control

Angus Gentle & Matthew Arnold

[email protected]

Improved absorption and emission on opaque materials is important for improving the efficiency of

photovoltaics. In particular, thermophotovoltaics (TPV) should maximize absorption on the “hot”

side and confine emission around the bandgap of the photovoltaic material. Mixtures of metals and

dielectrics offer a useful way to tune this emission – producing them requires attention to the

mutual wettability of the materials. Additionally the directionality of emission is important, and this

can be controlled either via multilayer structures or by production of vertically oriented

nanostructure. The aim of this project is to systematically produce a series of emission control

coatings (for example by varying the metal-dielectric deposition time or the deposition angle) and

characterize the angular emission.

Sketch of directional emission from a nanostructured coating

Techniques

The films will be grown either by sputtering or e-beam deposition using existing semi-automated

equipment. The optical properties will be characterised on a variety of equipment such as the

spectrophotometer, ellipsometer & emissometer. Some development of protocols and/or additions

to optical equipment could be performed by the student so it would particularly suit someone with

good instrumentation development skills. The structures will be characterized using SEM and/or

TEM cross-section.

Page 8: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

6

Enhancement of Raman spectroscopy using silver nano-stars

Annette Dowd, Shaoli Zhu

[email protected]

Raman spectroscopy is a useful technique that can provide information on the structure or

composition of a sample. The Raman signal can be massively amplified if the analyte is placed on a

particle or surface that can undergo a plasmon resonance with the Raman probe laser. This

phenomenon is known as Surface Enhanced Raman Spectroscopy (SERS) Here we will investigate the

degree to which SERS can be carried out on arrays of silver nano-stars (already) prepared using

electron beam lithography. One or more suitable Raman probe molecules will be used and the

Raman signal carefully mapped using as many different wavelengths of Raman probe laser as are

available. The work will be supported by numerical simulations of the electric field intensity around

the nano-particles (this part co-supervised by Prof. M Cortie). The purpose of the work is to

determine how much enhancement occurs, where exactly on the nano-star geometry the

enhancement occurs, and whether the maximum enhancement is at the plasmon resonant

wavelengths or (as recently reported in the scientific literature) at wavelengths that are significantly

red-shifted from the resonances.

Techniques

Raman microscopy and mapping, Surface Enhanced Raman Spectroscopy, numerical simulations of

electromagnetic fields generated by light, scanning electron microscopy, atomic force scanning

probe microscopy

Page 9: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

7

Optical spectroscopic probing of biological nanomachines: elucidating the

structure of CLIC proteins in cell membrane models

Annette Dowd, Stella Valenzuela, Linda Xiao

[email protected]

Raman spectroscopy is a potentially powerful tool to monitor modification in the lipid bilayer and

also the protein structure. Characteristic vibrations of chemical bonds can be subtly changed by their

nanoscale local environment, e.g. the frequency associated with the peptide bond depends on

whether it is situated in an alpha-helix or a beta-sheet structure. Raman spectroscopy can

interrogate these chemical bonds in a noninvasive way by using only a tightly focused laser beam.

The aim of this project is to add to knowledge about the structure of the CLIC protein machinery and

its insertion into lipid bilayer membranes using a novel application of Raman microspectroscopy.

This student will study the effect of cholesterol on the lipid structure, protein structure and its

insertion. The student will also develop the Raman technique by investigating different types of

membrane preparation (liposomes, single tethered layers etc) and the use of nanostructured SERS

substrates for signal enhancement.

This multidisciplinary project will be undertaken in PAM, CFS & MMB labs. Opportunities will be

available to access state-of-the-art equipment at the Vibrational Spectroscopy Facility at the

University of Sydney. (http://sydney.edu.au/science/chemistry/spectroscopy/index.shtml)

Techniques

Raman spectroscopy, Confocal microscopy, Magnetron sputtering, SEM, perhaps multivariate data

analysis depending on interest of student.

Page 10: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

8

Precipitation of intermetallic phases from metastable (Pt,Ag) thin films

Michael Cortie, Annette Dowd

[email protected]

Platinum electrodes are the preferred option for medical implants that cause neural stimulation.

However, pure platinum is quite soft. In this project we investigate whether Pt can be hardened by

additions of Ag. A side-benefit is that Ag is a potent bactericide, which may be useful in the medical

implant context. Thin films of Pt-Ag alloys will be prepared by physical vapour deposition and then

carefully characterized to determine their crystal structure, mechanical properties and solid-state

phase transformations. A key factor is whether the material remains in the desirable face centred

cubic structure or whether it transforms to brittle intermetallic compounds.

Techniques

magnetron sputtering, X ray diffraction, Rietveld data analysis of diffraction patterns,

crystallography, kinetics and thermodynamics of phase transformations, microscopy including SEM

and (maybe) TEM

Page 11: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

9

Directed and emergent phenomena in chemically-assisted charged particle

beam nanofabrication

Milos Toth, Charlene Lobo

[email protected]

Electron and ion beams can be focused down to ~1 nm and used for additive and subtractive

nanofabrication. The techniques typically employ a coincident pair of electron and Ga ion beams in a

vacuum chamber that contains a fabrication precursor gas (Fig. 1(a)). Deposition is achieved by

irradiating a substrate in the presence of a gas that contains the atoms of interest, while chemical

dry etching employs precursors such as XeF2 which are decomposed by a beam into species (e.g. F*)

that react with and volatilise a solid substrate. The beams primarily cause the dissociation of surface-

adsorbed (rather than gas-phase) precursor molecules, thereby leading to highly localised additive or

subtractive `3D printing' with a spatial resolution of ~10 nm (Fig. 1(b-c)). In addition, self-ordered,

`emergent' growth of complex, 3D nanostructures can arise from non-linear interactions between a

number of physical and chemical processes such as sputtering, self-masking, adsorbate dissociation,

and mass transport of molecular fragments and intact precursor molecules.

The present project will advance present understanding of the basic mechanisms behind chemically-

assisted charged particle beam fabrication. The student will have the option to achieve this

experimentally, and/or by advancing existing, state-of-the art computational modeling techniques.

Experimental work will be focused on identifying and elucidating basic mechanisms behind directed

and emergent growth phenomena. Theoretical work will involve the development of rate equation

algorithms for predictive models of material growth and processing rates.

Figure 1: Schematic illustrations of: (a) a coincident electron-ion beam system; (b) 3D printing by a focused scanned ion beam and (c) a

stationary defocused, top-hat electron beam; and, (d) emergent, bottom-up growth under a stationary beam.

Techniques

Electron and ion beam microscopy, scanning probe microscopy and/or computer models of EBIED

implemented in MatLab, Mathematica and/or the C++ programming language.

Ga+

subs

trat

e

e-

gas injector

b) c) d) a)

Page 12: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

10

Development of novel bio-markers based on fluorescent nanocrystals

Igor Aharonovich, Olga Shimoni

[email protected]

The goal of the project is to demonstrate use of nanodiamonds as bio-markers for biological tagging

and labelling. Nanodiamonds are biocompatible and host bright color centers which can be used as

efficient bio labels.

The project goals are to incorporation of the nanodiamonds into biological media – e.g. cells. Several

challenges will be addressed by the students during the project: prevention of nanodiamonds’

agglomeration, investigation of emitter photostability in small particles, characterization of

nanodiamonds in cells.

This multidisciplinary project will provide the student exposure to both optical and biological

sciences. The student will have access to the newly established nanophotonics laboratory that

includes a confocal microscope for the photoluminescence measurements as well as the opportunity

to learn basic biological processes and work with cells.

Techniques

Confocal microscopy, Scanning Electron Microscopy, biological sample preparation.

Page 13: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

11

Investigation of optically active 2D materials

Igor Aharonovich, Mike Ford

[email protected]

Two dimensional materials (2D) such as graphene attract a lot of attention due to their unique

photophysical properties. Recently, it was shown that single layers of di-chalcogenides (MoS2/WS2)

are optically active materials that exhibit bright florescence.

This project will be focused on understanding the optical properties of these materials. The student

will investigate defect generation in these materials, perform high resolution spectroscopy and

measure photon statistics.

The student will have access to the materials and will investigate novel growth methods of single

layered materials. The newly established nanophotonics laboratory that includes all the required

optical gear (single photon detectors, spectrometer, low temperature cryostat etc) will be used for

characterization. The student will also get experience in nanomaterials characterization using SEM,

AFM and will pursue basic nanofabrication processes.

Techniques

Confocal microscopy, Scanning Electron Microscopy, chemical vapor deposition,

Cathodoluminescence, low temperature spectroscopy.

Page 14: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

12

Coupling single emitters to plasmonic nanostructures

Igor Aharonovich, Matthew Arnold

[email protected]

The goal of the project is to develop robust methods to couple single emitters to plasmonic

nanostructures. One of the main challenges in single photon emitters is their relatively low

brightness. Through coupling to plasmonic resonators, the emission is enhanced and the excited

state lifetime is reduced.

The project will involve characterization of single photon emitters using a confocal microscope and

Hunbury Brown and Twiss interferometer. Once the emitters are selected, metal nanoparticles such

as gold and silver will be deterministically positioned in a close proximity to the emitters. To

optimize the coupling, various parameters including emitter’s distance, dipole orientation and the

plasmonic medium would be varied. If time permits, modeling of the system will be conducted to

understand the underlying photophysical processes.

The student will have access to the newly established nanophotonics laboratory that includes all the

required optical gear (single photon detectors, spectrometer, low temperature cryostat etc). The

student will also get experience in nanomaterials characterization using SEM, AFM and will pursue

basic nanofabrication processes.

Techniques

Confocal microscopy, Scanning Electron Microscopy, cathodoluminescence, low temperature

spectroscopy.

Page 15: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

13

Controlled growth of diamond nanostructures

Igor Aharonovich, Milos Toth, Olga Shimoni

[email protected]

The goal of the project is to develop growth of diamond nanoparticles and films using the newly

established microwave assisted chemical vapour deposition (CVD) reactor at UTS. One of the main

challenges will be controlling the density of the crystals, their final size and quality. A methodology

to incorporate fluorescent color centers into the diamond will be investigated as well.

The student will utilize the CVD reactor at UTS as well as the reactive ion etching system and

photolithography tools. This project will provide a thorough understanding into controlled growth of

diamond and fundamental nanofabrication techniques that will enable exposure to “real world”

technologically important processes. The student will also get experience in nanomaterials

characterization using SEM, and optical confocal microscopy.

Techniques

microwave CVD, photolithography, confocal microscopy, Scanning Electron Microscopy,

cathodoluminescence.

Page 16: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

14

Designing 2D materials for the future

Mike Ford

[email protected]

Computational materials science has been used for some time to describe the properties of existing

materials, for example the electronic properties of silicon. The future is using computers to design

new and novel materials that currently don’t exist (Heine Frontiers in Materials, 1, pp1, 2014).

Progress in computing hardware and software is bringing this goal nearer all the time. Add to this

the recent advances in understanding 2-dimensional (2D) materials (materials that are only one or a

few atoms thick, such as graphene, then the future becomes very interesting.

The aim of this project is to combine more traditional computational materials science with machine

learning methods to predict new hybrid materials that are yet to be made experimentally. A range of

potential 2D materials have already been identified (Lebegue et al Phys Rev X, 3, pp031002, 2013)

and will be the basic building blocks for our hybrid materials, for example alternating layers of MoS2

and graphene. Machine learning techniques will allow us to work out how to combine these

building blocks to make materials with the new functionalities. For example, combining the

excellent conductivity of graphene with the optical properties of MoS2.

Techniques

Computer based materials programs for calculating the properties of materials (eg VASP or SIESTA),

and machine learning neural network programs. We would most likely use the computer packages

VASP and SIESTA. Depending upon interest there is also opportunity to write your own programs for

analysis of the data. High performance computing facilities.

Page 17: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

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Super-atom materials

Mike Ford

[email protected]

Conventional solid materials are made from collections of atoms, for example NaCl is binary solid

compound made up of Na and Cl atoms bound to each other due to charge transfer between the

two atoms forming ionic bonds.

Recently the first in a whole new class of solid-state materials was produced (Roy et al, Science 341,

pp157 2013). In this material clusters of atoms are the basic building blocks once again held

together by charge transfer and Van der Waals bonds. This opens up the possibility of creating

whole families of new materials where properties and functionality can be controlled by varying the

superatom building blocks.

In this project we will use computer simulations to look at the atomic properties of these new

materials. The starting point would be those few materials already successfully synthesised

experimentally, with the aim of predicting new super-atom materials.

Techniques

Computer based materials simulations. We would most likely use the computer packages VASP and

SIESTA. These are both implementation of Density Functional Theory and solve the Schroedinger

equation. Depending upon interest there is also opportunity to write your own codes for analysis of

the data. High performance computing facilities.

Page 18: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

16

Heart displacement in free-breathing MR-PET image data

Michael Braun

[email protected]

In free-breathing positron emission tomography (PET) or single photon emission computed

tomography (SPECT), the image is acquired over a period extending over multiple respiratory cycles.

As the patient breathes, the thorax expands and contracts anisotropically, the diaphragm pushes up

on the thoracic cavity and the heart moves largely in the longitudinal direction. The heart

displacement causes substantial blurring that would not be corrected by ecg gating. Furthermore,

the cardiac displacement due to breathing is substantially less regular in frequency and amplitude

than the cardiac cycle. In a dual system, the PET or SPECT scanner is coupled with an anatomical

modality, such as the MR imaging system. Recent developments (M Uecker et al., NMR in

Biomedicine, 2010, see also http://en.wikipedia.org/wiki/File:Real-time_MRI_-_Thorax.ogv) allow

MR to capture thoracic images with temporal increments much smaller than the cardiac cycle. The

project will investigate the capture of cardiac displacement from the high spatial and temporal

resolution and application of the respiratory model to the complementary SPECT/PET data. Of

particular interest is the decoupling of the blurring caused by the cardiac displacement from the ecg

gated data.

The project will be carried out in collaboration with the Institute of Nuclear Medicine at the

University College London. It will suit a student comfortable with computational modelling (e.g. in

Matlab) and interest in medical imaging.

Techniques:

The student’s computational work will be implementing using a scripting language, such as Matlab

or IDL. Image data will be provided by collaborators at the University College London.

Page 19: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

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Nonlinear phononic interactions in nanophotonic structures

Chris Poulton

[email protected]

The project will be part of CUDOS, the ARC Centre of Excellence for nanophotonics, and involve

collaborating with researchers from UTS, Macquarie University and the University of Sydney. The

main focus of this research is on the theoretical and computational investigation of the nonlinear

interaction between acoustic and optical waves in integrated nanophotonic structures. These new

“phononic chips” promise breakthrough applications in high-speed optical processing and sensing,

and have recently been used in fundamental studies of “slow” and “fast” light. The honours project

will concentrate on using new theoretical and numerical techniques to model the complex

interaction between optical and acoustic waves in new materials and in microstructured devices.

The specific task will be to model the dynamics of the interaction in chalcogenide nanowires, first by

computing the otpical and acoustic modes and then using coupled mode theory to simulate the

dynamics. The optical field will lead to vibrations in the waveguide, which will function as a tuneable

long-period grating, which can be used for filtering or for the modification of optical pulses. An

analysis of the performance, feasibility and optimization of this grating structure will form the

capstone of this project.

This project requires good knowledge of electromagnetic theory and will involve some

programming.

Techniques

Electromagnetic theory, elasticity theory, programming using Matlab and COMSOL

Page 20: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

18

New Metal and Metal Oxide Core/Shell Nanoparticles

Andrew McDonagh

[email protected]

In this project, nanoparticles containing metal oxide cores coated with gold will be investigated. The

particles will then be examined by ablating them with a laser and analysing the masses of the

ablated materials under various conditions.

Nanoparticles made of gold have proven to be extremely valuable as probes to visualise important,

individual features within biological specimens. However, if multiple targets are to be imaged, then a

solid gold particle provides no means of distinguishing between the targets. As a solution to this

problem, core−shell structures may be used as extremely sensitive bio-imaging probes if they

possess an appropriate metal oxide core and gold shell.

Project outcomes: This project will result in new nanoparticles and new knowledge about the laser

ablation of the new particles under various conditions. The particles may be applied to biological

material to enable imaging of molecule/particle interactions as well as their interaction with light.

Techniques

Nanoparticle synthesis, molecular synthesis, measurement of optical properties, laser ablation, mass

spectrometry, scanning electron microscopy.

Page 21: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

19

Atomistic simulations on graphene-based materials for hydrogen storage

and in Li-ion batteries

Zhimin Ao, Guoxiu Wang

[email protected]

Graphene was experimentally fabricated for the first time in 2004 and was found with excellent

electrical, mechanical and thermal properties. Graphene has shown promising applications as ultra-

sensitive gas sensors, transparent electrodes in liquid crystal display devices, large capacity

electrodes in Li-ion batteries and hydrogen storage materials. In this project, to further explore

graphene applications in electronic devices, especially in Li-ion batteries, and hydrogen storage

materials, atomistic simulation method (using Materials Studio software and other first principles

calculation software) is used to predict the electronic and magnetic properties of graphene in the

presence of substrates and different kinds of defects, the interaction between hydrogen or Li-ion

and graphene related materials, then to determine the hydrogen storage behaviors or the

performance of Li-ion batteries.

Hydrogen storage in 3D graphene structure

Techniques:

Materials Studio software and other first principles calculation software.

High performance computing cluster in UTS, and National computing infrastructure in Canberra.

Page 22: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

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Novel nano-structured materials for high power energy storage

Hao Liu

[email protected]

Greenhouse gas emissions from the consumption of fossil fuels are causing disastrous climate

change and global warming. The research and development of electric vehicles to replace

conventional vehicles has emerged as a solution to this imminent problem. The progress of battery

technology plays a key role in the development of electric vehicles. This proposed project addresses

the issues by the development of innovative nano-structured materials for next generation batteries

with high capability, high power density and excellent retention. In this project, a series of novel

structured will be synthesised from wet-chemistry method. The resultant nano-structured materials

will be characterised by advanced instrumental analyses such as scanning electron microscopy

(SEM), transmission electron microscopy (TEM), nitrogen adsorption, small angle X-ray diffraction

(SAXRD), and small-angle X-ray scattering (SAXS) to determine the micro-structure. Their

electrochemical performance will be investigated for high-power energy systems, including lithium

ion batteries, sodium ion batteries, lithium sulphur batteries and lithium air batteries. In particular,

in situ analyses (XRD & TEM) will be conducted to investigate the working principle of energy storage

systems. This project will benefit UTS and Australia in the research forefront of nanotechnology,

materials engineering, energy storage and applied chemistry.

Techniques:

Material synthesis, characterization and electrochemical measurement.

Internal: Furnace, oven, microwave oven, glovebox , X-ray diffraction (in situ), Scanning Electron

Microscope, Atomic Force Microscopy, Transmission electron Microscopy. (Faculty of Science)

External: Neutron & Synchrotron X-ray diffraction (in situ), Transmission electron Microscopy.

(ANSTO, Australian synchrotron, USyd)

Page 23: Applied Physics/Nanotechnology Honours Research Projects 2015 · Applied Physics/Nanotechnology Honours Research Projects 2015 Supervisors Project Description Page Cuong Ton-That,

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Creating improved electrodes for cochlear and vision implants.

Charles Cranfield, Annette Dowd, Stella Valenzuela

[email protected]

This project aims to actually get cells to grow adjacent to gold electrodes using tethered bilayer lipid

membranes. By investigating ways to grow cells directly onto gold we hope to demonstrate how to

improve electrode design in cochlear and retinal implants.

By anchoring cells directly onto the electrodes will enable improved resolution of electrically

implanted devices such cochlear and retinal implants. Currently, implanted stimulatory electrodes

are hampered in that they overstimulate too many cells at once.

The student will grow murine cardiomyocyte like cells (HL-1 cell line) cells (which are electrically

excitable) to near confluence on electrodes that have been chemically coated with tethering

chemistries provided by SDx Tethered Membranes Pty Ltd. Using electrical impedance spectroscopy

the student will determine if cells directly adjacent to the electrodes are being stimulated.

If time permits, the student will also demonstrate that the cells are being stimulated using

membrane potential fluorophores in conjunction with confocal microscopy.

Techniques: cell culture, impedance spectroscopy, confocal microscopy

Note: this project involves PC1 cell culture which will require that the student has or can quickly

develop an aptitude for biology (with assistance from supervisors). The Applied Physics and

Nanotechnology degrees require that the results can be explained to physicists.