annotum scholarly publishing platform
DESCRIPTION
Presentation for Beyond The PDFTRANSCRIPT
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AnnotumAn open-source scholarly authoring and publishing platform based on WordPress
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New models of scholarly communication
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New models of scholarly communication
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PLoS Currents: Key features
• Registration• Articles are date-stamped and citable
• Certification• Reviewed by expert researchers
• Dissemination• All content is open access
• Preservation• Archived at PubMed Central
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knol.google.com
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Knol authoring features
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PLoS:Currents – review workflow
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PLoS:Currents – review workflow
1. Editor selects reviewers 2. Reviewers enter comments
3. Approved content published to Knol and PubMed Central
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PLoS:Currents limitations
• DTD/Structural conformance has been a challenge
• No import of existing content (compilations, re-use)
• Single-source hosting – features, workflow, etc. cannot be brought in-house or modified
• Limited output/formatting options
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Annotum: goals for v1.0
• Replicate the basic Knol / PLoS:Currents feature set • Address limitations of Knol toolset
• DTD conformance (enforcement) and import/export• Support for rich designs and additional output formats• Provide flexible hosting options via open source code
• Out of scope: • Replace all print/online journals, tools, systems• Solve all issues raised at #beyondthepdf
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Annotum: v1.0 key features
• Based on WordPress• Rich network of designers, developers, and add-on services• Simple to self-install and administer• Stable, scalable, wide adoption – many millions of blogs
• Authoring tools: tables, equations, citations, figures• Simple review workflow with pre- and post-review comments (public and non-public)
• “Beautiful” templates for presentation (web, pdf, txt)• “Round-trip” import and export via NLM XML
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Timeline (tentative)Task Jan-11 Feb-11 Mar-11 Apr-11 May-11 Jun-11 Jul-11 Aug-11 Sep-11
Task 1: Setup
Task 2: Requirements
Task 3: Implementation(2-week sprints)
Task 4: Launch
Task 5: Support
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Kickoff
Detailed Requirements Complete
1 2 3 4 5 6 7 8
Beta VIP Migration
Ongoing
Walk-throughs
Mid-project Review
Wrap-up
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Annotum: issues for v1.0 and beyond
• Who defines document structure? • A human must be involved – author, editor, or repository
owner. Annotum asks the author/submitter to do this.
• What workflow/review models are needed beyond PLoS:Currents quick-review use case?
• Support for new data formats and elements?
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Thank you!
Many thanks to: Google/Knol, PLoS, NIH/NLM/NCBI, WordPress.com, Crowd Favorite
Carl Leubsdorf, Jr.
http://solvitor.com
Special thanks to Mark Patterson, PLoS for several slides used in this presentation.
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Appendix
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WordPress supports rich designs
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vs.
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Use case – small group
A group of collaborators use a local installation to author and collaborate on a series of articles, which are then published on the web or printed (PDF) for distribution to their friends and colleagues
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Author / Invite / Edit
PDF/RTF
XML Export
CoauthorsWeb Publish
Annotum
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Use case – online journal
• Submissions via XML import or authored on-site• Approved articles published or exported
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Reviewers
Invite / Review
PubMed Central
Author / Invite / Edit
Coauthors
PDF/RTF
XML Export
Web Publish
XML Import
Annotum
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Annotum vision: a “knowledge ecosystem”
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Invite / EditExport PDF
Export XML
Invite / Edit
Local independently-produced print journal
Reviewers
Invite / ReviewAdditionalCoauthor
Publish to Web
Export XML
University Journal sharing content with PubMed Central
Invite /
Review
Publish to Web
Large open-access eJournal
Export XML
PubMedCentral
XML
PublishCoauthors
Reviewers
Invite / Edit
Invite / Edit
XML
Invite /
Review
“Freemium” Open Journal Hosting Network
MultipleReviewerGroups
MultipleCoauthorGroups
Coauthors
Annotum
Annotum
Annotum
Annotum