anaerobic soil disinfestation (asd): updates on research...

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Anaerobic Soil Disinfestation (ASD): Updates on Research and Implementation C. Shennan 1 , J. Muramoto 1 , G. Baird 1 , M. Mazzola 6 , M. Bolda 4 , S. T. Koike 4 , O. Daugovish 4 , M. Mochizuki 4 , S. Dara 4 , K. Klonsky 5 , E. Rosskopf 3 , N. K. Burelle 3 , D. Butler 2,3 1 Univ. of California, Santa Cruz, 2 Univ. Tennessee 3 USDA-ARS, U.S. Horticultural Research Lab, Florida, 4 Univ. of California Cooperative Extension 5 Univ. of California, Davis 6 USDA ARS Wenatchee, WA. Funded by USDA-NIFA MBTP 2012-51102-20294 and CA Strawberry Commission

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Page 1: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

Anaerobic Soil Disinfestation (ASD): Updates on Research and Implementation

C. Shennan1, J. Muramoto1, G. Baird1, M. Mazzola6, M. Bolda4, S. T. Koike4, O. Daugovish4, M. Mochizuki4, S. Dara4, K. Klonsky5, E. Rosskopf3, N. K. Burelle3 , D. Butler2,3

1Univ. of California, Santa Cruz, 2Univ. Tennessee 3USDA-ARS, U.S. Horticultural Research Lab, Florida, 4Univ. of California Cooperative Extension 5 Univ. of California, Davis 6USDA ARS Wenatchee, WA.

Funded by USDA-NIFA MBTP 2012-51102-20294 and CA Strawberry

Commission

Page 2: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

Acknowledgements Margherita Zavatta, Lucy Toyama, and student workers, interns, and volunteers of

the Shennan lab, UCSC

Monise Sheehan, Kat Kammeijer, Laura Murphy, Patty Ayala at UCCE

Hillary Thomas, Alex Orozco, Mark Edsall, and Dan Legard, CA Strawberry Commission

Steve Fennimore, UC Davis.

Thomas Flewell and crew, Dole Food Company, Inc.

Dave Peck, Manzanita Berry Farms

Jenny Broome, Dan Chellemi, Natalia Neerdaels, Emily Paddock and Marty Madesko, Driscoll’s

Mike Nelson, Patti Wallace and Luis Rodriguez, Plant Sciences

Rod Koda, Shinta Kawahara Farm

Bryan Gresser, Central West Produce

Will Doyle, W.D. Berry Farms

Jonathon Winslow, Stephanie Bourcier, Farm Fuel Inc. and Frontier Ag Company Inc.

Page 3: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

Outline – Anaerobic Soil Disinfestation What we know:

ASD and V. dahliae suppression Yield responses in past field trials Economics

Recent trials: N issues and pre-plant fertilizer C-source makes a difference Efficacy against different pathogens? Issues with scaling up and site differences

Future needs and ongoing trials

Page 4: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

ASD: Some Target Pests and Crops Soil-borne pathogens Verticillium dahliae1,2,4

Fusarium oxysporum1,2,3 Fusarium redolens2

Macrophomina phaseolina3 Ralstonia solanacearum2 Rhizoctonia solani1

Sclerotium rolsfii3

Nematode Meloidogyne incognita1 Pratylenchus fallax2

Weed Nutsedge3

Crops tested Welsh onion2

Tomatoes2,3 Strawberries2,4 Eggplant2, 3 Spinach2

Peppers3 Maple1 Catalpa1

• Cut flowers3

1 Dutch studies; 2 Japanese studies; 3Florida studies; 4 California studies

Page 5: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

ASD: Three Steps

1. Incorporate organic material

Provides C source for soil microbes

2.Cover with oxygen impermeable tarp

3. Irrigate to saturation and maintain field capacity for 3 weeks

Water-filled pore space

Create anaerobic conditions and stimulate anaerobic decomposition of incorporated organic material

Page 6: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -
Page 7: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -
Page 8: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

Total irrigation rate: at least 3 acre-inches

Page 9: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

Findings to 2012

1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 - equal to MeBr (and UTC) yields 2. Watsonville 2010 - within 15% of MeBr yields 3. Ventura 2011 – 75% increase yield over UTC 4. Castroville 2011- as good or better than Pic-Clor 5. Watsonville 2011 – equal to Pic-Clor and steam 6. Santa Maria 2012 – equal to Pic-Clor 7. Watsonville 2012 – lower yield than steam/Pic-Clor

but higher than UTC – poor anaerobic conditions 2. Got consistently good V. dahliae suppression - 80 to 100%

decrease in # microslerotia in soil, using a range of C sources provided good anaerobic conditions

3. Weed suppression limited in the central coast of CA

Page 10: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

Findings to 2012 (contd): 4. Need to accumulate 50,000 mV hrs of Eh below

200mV to get V. dahliae suppression, and for soil temps to be above 65oF for at least first week of ASD treatment

-500 -400 -300 -200 -100

0 100 200 300 400 500 600

9/8 9/15 9/22 9/29 10/6

Eh m

V

Changes in Soil Eh (mV )

Aerobic

Anaerobic

0

50,000

100,000

150,000

200,000

250,000

0 10 20 30 ASD treatment (days)

Cumulative Eh mV Hours

threshold

Page 11: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

2012-2013 Replicated Trials 1. Watsonville: Driscoll’s and Plant Sciences

ASD w/rice bran 6 t/ac and 9 t/ac, ASD w/molasses 6 t/ac and 9 t/ac, ASD w/rice bran 4.5 t/ac + molasses 4.5 t/ac, and UTC

2. Watsonville: MBA

ASD w/rice bran 9 t/ac, ASD w/molasses 9 t/ac, ASD w/rice bran 4.5 t/ac + molasses 4.5 t/ac, Rice bran 9 t/ac w/o water, Water w/o C-sources, and UTC

3. Watsonville: Cassin Ranch (MeBr buffer zone) and Driscoll’s

ASD w/rice bran 9 t/ac, ASD w/molasses 9 t/ac, Steam, Steam + MSM, and UTC

4. Santa Cruz: UCSC Organic Farm

ASD w/rice bran 4.5 t/ac + molasses 4.5 t/ac w/ and w/o compost, MSM, and UTC

Location C-source/treatments type

Watsonville Rice bran 6, 9 t/ac Molasses 6, 9 t/ac RB 4.5 + Mol 4.5 t/ac UTC

2x Conventional

Watsonville Rice bran 6, 9 t/ac Molasses 6, 9 t/ac RB 4.5 + Mol 4.5 t/ac Controls: UTC, Water only, Rice bran 9 t/ac – no water

Conventional - MBA

Watsonville Rice Bran 9 t/ac Molasses 9 t/ac Steam Steam + Mustard Seed meal UTC

Conventional

Santa Cruz RB 4.5 + Mol 4.5 t/ac +/- compost Mustard Seed meal UTC

Organic

Page 12: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

2012-2013 Demonstration Trials –Monitoring

Location C-source Acreage

type

Watsonville 9t/ac Rice Bran or 4.5t/ac RB+4.5t/ac Molasses +/- preplant fertilizer

1 0.5

Organic Conventional

Salinas 9 t/ac Molasses 0.5 Conventional

Salinas 9 t/ac Molasses 1 Conventional

Santa Maria 9 t/ac Molasses 0.5 Conventional

Page 13: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

2013 - 0.5 -1ac Demonstration Sites – Sandy Soil Good ASD Established

-500

-400

-300

-200

-100

0

100

200

300

400

500

600

9/8 9/15 9/22 9/29 10/6

Eh m

V Changes in Soil Eh (6" depth)

(Conventional Site)

-500

-400

-300

-200

-100

0

100

200

300

400

500

600

9/15 9/22 9/29 10/6

Eh m

V

Changes in Soil Eh (6" depth) (Organic Site)

RB9-Fert

RB9+Fert

RB4.5+Mol4.5-Fert

RB4.5+Mol4.5+Fert

Aerobic

Anaerobic

Page 14: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

• Fertility management?

ASD with 9ton/ac Rice Bran equal yields to MeBr in conventional site

Little effect of pre-plant fertilizer in conventional (slow release 18-6-12 600 lbs/ac) or organic site (feather meal 1000 lbs/ac)

RB+Molasses worked well at organic site – better with pre-plant?

Page 15: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

0

20,000

40,000

60,000

80,000

Cum

ulat

ive

mar

keta

ble

fruit

yiel

d lb

s/ac

re

Cumulative Marketable Fruit Yield (PSI. Albion. Mean ± SEMs)

A AB ABC ABCD BCDE CDE DE E

a a a ab

bc cd de

e

But ……. Strong pre-plant fertilizer effect at another site… Yields in ASD w/RB, or RB+Molasses same or better than MeBr or Pic-Clor

Page 16: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

Efficacy against other pathogens:

Watsonville 2011

% roots from which Rhizoctonia was isolated

Page 17: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

Pythium spp.

Cylindrocarpon spp.

% roots from which fungi was isolated Watsonville 2011

Page 18: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

6/21/2013 5/08/2013 8/02/2013

Progress of Fusarium wilt at MBA 2013

• Fall Bed ASD does not control Fusarium

• Works elsewhere when soil temperature higher

Threshold 86 deg F (30 deg C)

Page 19: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

Summer flat ASD w/ clear TIF MBA 2013

Page 20: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

Summer flat ASD w/ clear TIF MBA 2013 – control Fusarium?

0

25,000

50,000

75,000

100,000

125,000

150,000

175,000

200,000

225,000

8/4 8/14 8/24 9/3 9/13 9/23

Cum

Eh

mV

hrs

Summer flat ASD RB9t/ac Summer flat ASD RB4.5t/ac

Changes in Cumulative Eh mV Hours (MBA 2013)

Threshold to kill Verticillium dahliae at 25 °C

15.0

20.0

25.0

30.0

35.0

40.0

45.0

8/10/13 8/17/13 8/24/13 8/31/13 9/7/13 9/14/13 9/21/13 9/28/13

Soil

tem

p °C

Changes in Soil Temperature at 6" depth (MBA 2013) UTC

Summer flat ASD RB9t/ac

Summer flat ASD RB4.5t/ac

Threshold to kill Fusarium oxysporum

Page 21: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

Oct. 2012 Sugarcane Molasses Injection (1:1 to 1:3 dilution with H2O)

Page 22: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

C sources and efficacy?

Efficacy of molasses not good in CA, although works in Fl and Japan Fruit yield ~70% of fumigated control Temperature issue? Distribution issue? Short-lived anaerobic conditions - split applications

needed to sustain anaerobic conditions at lower temperatures?

Mix molasses and rice bran - promising?

Need to assess different C sources on various organisms at different temperature regimes

Page 23: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

Spence Field - Salinas Fall 2012

-300

-200

-100

0

100

200

300

400

500

10/13 10/20 10/27 11/3 11/10 11/17

Eh m

V

Changes in Soil Eh (6" depth) (Spence, Salinas. 2012)

Aerobic

Anaerobic

1st molasses injection

2nd molasses injection (10/23/12 3 ton/ac)

Page 24: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

C- Source efficacy? Differential effects of Molasses versus Rice Bran ASD on fungal communities

0.00E+00

1.00E+06

2.00E+06

3.00E+06

4.00E+06

5.00E+06

6.00E+06

7.00E+06

8.00E+06

9.00E+06

UTC Mol 6 Mol 9 RB 6 RB 9 RBMol PicChlor MBPic

cfu

g-1 s

oil

M. Mazzola 2013

Page 25: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

ASD effects on fungal community composition also depends on C source (T-RFLP analysis)

Fumigant UTC and Molasses RB or RB + Mol

M. Mazzola, 2013

Page 26: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

Practical issues to be addressed

Scaling up: 2012; 120 acres under ASD 2013; 430 acres under ASD – 29 ac Conventional

401 ac Organic 67% of growers who did ASD in 2012 continued to use

it in 2013 Variability in achieving good anaerobic conditions

Page 27: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

• Porous soil structure in heavy soil (large clods) prevented good ASD conditions

• Macrophomina and other pathogens not controlled

Page 28: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

When Verticillium levels in soil very high (30+ microsclerotia/g soil), ASD may not completely eliminate disease

Watsonville field

0

10000

20000

30000

40000

UTC ASD molasses 9

tons/ac

ASD rice bran 9

tons/ac

Steam Steam + MSM

Cum

ulat

ive

mar

keta

ble

fruit

yiel

d (lb

s/ac

re)

Marketable Fruit Yield Proprietary variety. 8/17/13. Mean ± SEM A

AB BC

CD D

Page 29: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

Alternatives to rice bran as C source?

Bed application costs with 9 ton/ac rice bran typically around $2000-2400 per acre compared with about $1200/ac for Pic-Clor

High total N addition – about 360lb/ac

Other C-sources to reduce costs and N application? Flat application and reduced rate options? Reduce fertility applications to account for C source

nutrients

Page 30: Anaerobic Soil Disinfestation (ASD): Updates on Research ...cesantacruz.ucanr.edu/files/177626.pdfFindings to 2012 1. Good yields obtained with 9ton/ac rice bran 1. Salinas 2010 -

Future work Effectiveness for controlling different pathogens needs much more

work – what temperature, anaerobic thresholds and C-sources work for each pathogen

Cost and nitrogen issues – other options for C-sources: Molasses – can efficacy be improved? Grape pomace not promising - other options? Summer cover crops may work as partial C-source Flat application may allow reduction of RB application rate? Degree of N2O emission?

Limitations of bed application – challenges of creating anaerobic conditions in heavier soils. Options for flat application and reduced C input rates?

Possible combination of ASD with other strategies? Sequential with MSM? With low rate of fumigants?