appendix a upper watershed hydrology calibration

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A-1

Appendix A Upper Watershed Hydrology Calibration

A.1 Introduction

The SacWAM model was calibrated in a multi-step process that covered the upper watersheds, the Sacramento Valley floor and CVP/SWP project operations. The first step was to calibrate the rainfall runoff processes in the catchments located upstream of the valley rim reservoirs as these calculations are independent of all other processes in the model. This involved tuning the Soil Moisture method hydrological parameters in the catchments until simulated and observed historical flows matched within an acceptable degree of tolerance. This calibration is described below. Following completion of the upper watershed calibration, the next step was to focus on processes occurring on the Sacramento Valley floor. This calibration is described in Appendix B. The upper watersheds of SacWAM were calibrated by adjusting Soil Moisture Method hydrological parameters until stream flows agreed with DWR reported unimpaired flows. Calibration was performed at the following 21 locations (Figure A-1 and Figure A-2):

American River at Fair Oaks

Battle Creek

Clear Lake Inflow

Calaveras River near Bellota

Clear Creek nr Igo

Cosumnes River

Cottonwood nr Olinda

Cow Creek

Elder Creek

Feather River

Jackson Creek

Mokelumne River

N Fork Cache Creek

Paynes Creek

Putah Creek

Sacramento at Shasta

Stony Creek

Thomes Creek

Trinity at Trinity Reservoir

Yuba River at New Bullards Bar

Yuba River at Englebright

The calibration period was water years 1970 – 2009, which represents both periods of high and low flow. The calibrated streams are the largest streams in the region. In the discussion below, flow statistics are presented for the 21 calibrated streams and an additional 17 smaller streams that were not calibrated. Initially the snow parameters, crop coefficients, soil water capacity, deep water capacity, runoff resistance factor, root zone conductivity, deep conductivity, and preferred flow direction were set using parameters from the CVPA model. During calibration additional adjustments were made to all parameters except crop coefficients and runoff resistance factors. Comparison between simulated and observed flows at the locations shown in Figure A-1 and Figure A-2 were made using the Nash-Sutcliffe efficiency (E), root mean square error (RMSE)/Mean, and BIAS. These statistics were calculated using the following equations.

A-2

𝐸 = 1 −∑ (𝑄𝑠,𝑖 −𝑛𝑖=1 𝑄𝑜,𝑖)

2

∑ (𝑄𝑜,𝑖 −𝑛𝑖=1 �̅�𝑜)

2

n

QQ

QRMSE

n

i iois

o

1

2

,,)(100

]/)[(100oos

QQQBIAS

where: n= number of months in the calibration period (480); Qs,i = simulated monthly flow for time step i; Qo,i= observed monthly flow for time step i;

�̅�𝑜= average of observed monthly flow values.

A-3

Figure A-1 Streamflow Calibration Points (North)

A-4

Figure A-2 Streamflow Calibration Points (South)

A-5

These adjustments were made based on an iterative approach in which the following steps were taken:

1. If a sub watershed had significant snow accumulation then the snow melt and freeze thresholds

were adjusted so that the monthly average flow values peaked during the correct month. An

additional effort was made to match simulated snow water equivalent values to recorded values

at snow gauge locations similar to the approach described in Young et al. (2009). However, after

an initial analysis was conducted, it was determined that the 500-meter elevation bands used in

the model resulted in a simulated values that were too coarse to compare with point

observations.

2. Simulated annual average flow volume was compared to observed values. If the simulated value

was larger than observed then the soil water capacity and root zone conductivity were adjusted

to increase the ET thereby reducing the stream flow. If the simulated value was smaller than

observed then the soil water capacity and root zone conductivity were altered to decrease ET.

3. The simulated monthly average hydrograph was compared to the observed to determine if dry

season low flows (July – Oct) were in agreement. If not, three parameters were adjusted. First,

the preferred flow direction was altered to increase or decrease the amount of water flowing

into the second compartment. Second, the deep water capacity and deep conductivity were

adjusted until the decline in summer flows in the observation record were matched by the

simulated values. Often, this resulted in smaller values of the deep water capacity and larger

values of deep conductivity than the initial values, which resulted more rapid drainage of the

deeper compartment.

The process used to arrive at the final calibration factors was a combination of manual and automated approaches. Preliminary exploration of the model performance was conducted by a brute force method in which the model was run over a range of parameter values. Maximum and minimum parameter values were set based on the author’s experience. For each model run, the goodness of fit statistics discussed above were calculated. Following these automated model runs, plots of Nash Sutcliffe, BIAS, and RMSE/Mean were produced that showed which combinations of parameters resulted in the best model performance. In general, low values of model BIAS were favored over higher Nash Sutcliffe or lower RMSE/Mean values. Plots were also made of monthly average flows for each parameter combination. These graphs were inspected visually for goodness of fit. Once a set of parameters was selected from the brute force analysis, additional model runs were made either using the brute force approach with reduced parameter ranges or an automated parameter estimation process employing the PEST software was run. The graphical results of the calibration can be found below. Plots of monthly flows, monthly average flows, annual flows, and flow exceedance are provided. Goodness of fit statistics are provided in Table A-1. Initial calibration efforts were focused on the largest rivers in the system including the upper Sacramento, Trinity, Feather, and American Rivers as well as tributaries that are of higher interest to SWRCB. Particular effort was made to keep the BIAS values close to zero. In future efforts, the accuracy of the runoff simulations for the smaller streams could be improved.

A-6

Table A-1 Upper Watershed Summary Statistics

Stream BIAS RMSE/Mean NSE Calibrated

American River at Fair Oaks -3.0% 64.0% 74.1% Y Antelope Creek -1.8% 60.2% 72.8% N Battle Creek -5.6% 40.3% 62.2% Y Bear Creek 34.4% 63.4% 77.1% N Bear River at Camp Far West 3.1% 45.1% 91.2% N Big Chico Creek 2.5% 66.7% 83.3% N Butte Creek -19.4% 62.5% 75.2% N Clear Lake Inflow 15.8% 69.6% 82.5% Y Calaveras River near Bellota 2.0% 72.9% 86.8% Y Clear Creek near Igo -1.0% 56.2% 83.2% Y Cosumnes River 18.5% 73.4% 80.8% Y Cottonwood near Olinda 4.8% 49.5% 91.1% Y Cow Creek 2.2% 45.7% 89.6% Y Deer Creek -5.2% 49.4% 81.1% N Dry Creek 72.0% 110.8% 70.8% N Dry and Hutchinson 48.5% 98.1% 69.5% N Elder Creek 12.8% 93.8% 69.1% Y Feather River -0.5% 50.3% 78.6% Y French Dry Creek 125.0% 180.9% -14.3% N Honcut Creek 74.9% 228.4% 35.9% N Jackson Creek 29.6% 86.6% 73.2% Y Kellogg Creek 227.7% 333.1% -21.2% N Little Chico Creek 3.2% 74.0% 83.7% N Little Stony Creek -2.2% 101.7% 62.6% N Littlejohns Creek -8.1% 177.5% 41.4% N Marsh Creek 19.6% 204.2% 45.4% N Mill Creek -5.6% 52.6% 60.6% N Mokelumne River 2.4% 63.1% 74.1% Y North Fork Cache Creek 13.4% 99.0% 74.1% Y Paynes Creek -2.4% 69.7% 83.7% Y Putah Creek 29.3% 87.3% 82.1% Y Sacramento at Shasta 0.7% 31.7% 85.9% Y South Fork Cottonwood -33.6% 77.9% 77.9% N Stony Creek -13.3% 81.2% 80.0% Y Thomes Creek 29.8% 99.1% 53.8% Y Trinity at Trinity Reservoir -1.9% 59.4% 69.6% Y Yuba River at NBB 4.6% 59.9% 74.7% Y Yuba River at Englebright 9.3% 57.6% 76.0% Y

Key: N=No; NBB=New Bullards Bar NSE=Nash-Sutcliffe Efficiency; RMSE=root mean square error; Y=yes.

In the charts below, “Historical” represents full natural flows; “Simulated” represents simulated natural flows with all upstream operations removed.

A-7

Figure A-3 American at Fair Oaks

BIAS RMSE/Mean NSE

-3.00% 64.03% 74.13%

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A-8

Figure A-4 Antelope Ck nr Red Bluff

BIAS RMSE/Mean NSE

-1.77% 60.22% 72.76%

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A-9

Figure A-5 Battle Ck nr Cottonwood

BIAS RMSE/Mean NSE

-5.62% 40.26% 62.18%

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A-10

Figure A-6 Bear Ck nr Millville

BIAS RMSE/Mean NSE

34.41% 63.42% 77.12%

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A-11

Figure A-7 Bear River at Camp Far West

BIAS RMSE/Mean NSE

3.10% 45.08% 91.21%

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A-12

Figure A-8 Big Chico Ck nr Chico

BIAS RMSE/Mean NSE

2.50% 66.75% 83.34%

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A-13

Figure A-9 Butte Ck nr Chico

BIAS RMSE/Mean NSE

-19.36% 62.54% 75.16%

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A-14

Figure A-10 Clear Lake Inflows

BIAS RMSE/Mean NSE

15.82% 69.59% 82.53%

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A-15

Figure A-11 Calaveras nr Bellota

BIAS RMSE/Mean NSE

3.62% 72.05% 87.23%

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A-16

Figure A-12 Clear Creek nr Igo

BIAS RMSE/Mean NSE

-4.99% 53.67% 84.64%

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A-17

Figure A-13 Cosumnes at Michigan Bar

BIAS RMSE/Mean NSE

18.53% 73.38% 80.79%

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A-18

Figure A-14 Cottonwood Ck nr Olinda

BIAS RMSE/Mean NSE

4.81% 49.51% 91.08%

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A-19

Figure A-15 Cow Ck at RM 14

BIAS RMSE/Mean NSE

2.16% 45.75% 89.55%

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A-20

Figure A-16 Deer Ck nr Vina

BIAS RMSE/Mean NSE

-5.22% 49.43% 81.13%

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A-21

Figure A-17 Dry Ck (tributary to the Mokelumne River)

BIAS RMSE/Mean NSE

72.01% 110.75% 70.83%

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A-22

Figure A-18 Dry and Hutchinson Ck

BIAS RMSE/Mean NSE

48.51% 98.15% 69.50%

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A-23

Figure A-19 lder Ck nr Paskenta

BIAS RMSE/Mean NSE

12.75% 93.77% 69.15%

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A-24

Figure A-20 Feather at Oroville

BIAS RMSE/Mean NSE

-0.54% 50.27% 78.63%

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A-25

Figure A-21 French Dry Creek (Merle Collins Inflow)

BIAS RMSE/Mean NSE

125.00% 180.94% -14.29%

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A-26

Figure A-22 S Honcut Ck nr Bangor

BIAS RMSE/Mean NSE

74.87% 228.35% 35.92%

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A-27

Figure A-23 Jackson Creek (Amador Reservoir Inflow)

BIAS RMSE/Mean NSE

29.63% 86.61% 73.24%

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0

20

40

60

80

100

120

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

1

2

3

4

5

6

7

8

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

5

10

15

20

25

30

35

40

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-28

Figure A-24 Kellog Creek (Los Vaqueros Reservoir Inflow)

BIAS RMSE/Mean NSE

227.74% 333.08% -21.20%

0

1

1

2

2

3

3

4F

low

(TA

F/m

onth

)Simulated Historical

0

2

4

6

8

10

12

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

0

0

1

1

1

1

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

1

1

2

2

3

3

4

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-29

Figure A-25 Little Chico Ck at RM 38

BIAS RMSE/Mean NSE

3.18% 73.98% 83.74%

0

5

10

15

20

25

30

35F

low

(TA

F/m

onth

)Simulated Historical

0

10

20

30

40

50

60

70

80

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

1

2

3

4

5

6

7

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

5

10

15

20

25

30

35

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-30

Figure A-26 Little Stony Creek (East Park Reservoir Inflow)

BIAS RMSE/Mean NSE

-2.21% 101.74% 62.61%

0

10

20

30

40

50

60

70

80

90F

low

(TA

F/m

onth

)Simulated Historical

0

20

40

60

80

100

120

140

160

180

200

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

2

4

6

8

10

12

14

16

18

20

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

10

20

30

40

50

60

70

80

90

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-31

Figure A-27 Littlejohns Creek (Farmington Reservoir Inflow)

BIAS RMSE/Mean NSE

-8.06% 177.47% 41.36%

0

10

20

30

40

50

60

70

80

90F

low

(TA

F/m

onth

)Simulated Historical

0

50

100

150

200

250

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

2

4

6

8

10

12

14

16

18

20

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

10

20

30

40

50

60

70

80

90

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-32

Figure A-28 Marsh Ck at RM 15

BIAS RMSE/Mean NSE

19.55% 204.23% 45.37%

0

5

10

15

20

25

30

35

40F

low

(TA

F/m

onth

)Simulated Historical

0

10

20

30

40

50

60

70

80

90

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

1

1

2

2

3

3

4

4

5

5

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

5

10

15

20

25

30

35

40

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-33

Figure A-29 Mill Ck nr Los Molinos

BIAS RMSE/Mean NSE

-5.56% 52.64% 60.57%

0

20

40

60

80

100

120F

low

(TA

F/m

onth

)Simulated Historical

0

50

100

150

200

250

300

350

400

450

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

5

10

15

20

25

30

35

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

20

40

60

80

100

120

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-34

Figure A-30 Mokelumne River at Pardee

BIAS RMSE/Mean NSE

2.44% 63.05% 74.08%

0

100

200

300

400

500

600F

low

(TA

F/m

onth

)Simulated Historical

0

200

400

600

800

1,000

1,200

1,400

1,600

1,800

2,000

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

50

100

150

200

250

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

100

200

300

400

500

600

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-35

Figure A-31 North Fork Cache Creek (Indian Valley Reservoir Inflow)

BIAS RMSE/Mean NSE

13.39% 99.05% 74.13%

0

20

40

60

80

100

120

140

160

180

200F

low

(TA

F/m

onth

)Simulated Historical

0

50

100

150

200

250

300

350

400

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

5

10

15

20

25

30

35

40

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

20

40

60

80

100

120

140

160

180

200

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-36

Figure A-32 Paynes and Sevenmile Cks

BIAS RMSE/Mean NSE

-2.44% 69.72% 83.72%

0

10

20

30

40

50

60

70

80F

low

(TA

F/m

onth

)Simulated Historical

0

20

40

60

80

100

120

140

160

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

2

4

6

8

10

12

14

16

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

10

20

30

40

50

60

70

80

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-37

Figure A-33 Putah Creek (Lake Berryessa Reservoir Inflow)

BIAS RMSE/Mean NSE

29.32% 87.28% 82.06%

0

50

100

150

200

250

300

350

400

450

500F

low

(TA

F/m

onth

)Simulated Historical

0

200

400

600

800

1,000

1,200

1,400

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

20

40

60

80

100

120

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

50

100

150

200

250

300

350

400

450

500

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-38

Figure A-34 Sacramento River (Shasta Lake Reservoir Inflow)

BIAS RMSE/Mean NSE

0.70% 31.72% 85.91%

0

500

1,000

1,500

2,000

2,500

3,000

3,500F

low

(TA

F/m

onth

)Simulated Historical

0

2,000

4,000

6,000

8,000

10,000

12,000

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

200

400

600

800

1,000

1,200

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

500

1,000

1,500

2,000

2,500

3,000

3,500

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-39

Figure A-35 SF Cottonwood Ck nr Olinda

BIAS RMSE/Mean NSE

-33.58% 77.86% 77.95%

0

50

100

150

200

250

300

350

400F

low

(TA

F/m

onth

)Simulated Historical

0

200

400

600

800

1,000

1,200

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

10

20

30

40

50

60

70

80

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

50

100

150

200

250

300

350

400

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-40

Figure A-36 Stony Ck at Black Butte

BIAS RMSE/Mean NSE

-13.33% 81.19% 80.02%

0

100

200

300

400

500

600F

low

(TA

F/m

onth

)Simulated Historical

0

200

400

600

800

1,000

1,200

1,400

1,600

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

20

40

60

80

100

120

140

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

100

200

300

400

500

600

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-41

Figure A-37 Thomes Ck at Paskenta

BIAS RMSE/Mean NSE

29.76% 99.09% 53.83%

0

50

100

150

200

250F

low

(TA

F/m

onth

)Simulated Historical

0

100

200

300

400

500

600

700

800

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

10

20

30

40

50

60

70

80

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

50

100

150

200

250

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-42

Figure A-38 Trinity River (Trinity Reservoir Inflow)

BIAS RMSE/Mean NSE

-1.94% 59.42% 69.61%

0

100

200

300

400

500

600

700F

low

(TA

F/m

onth

)Simulated Historical

0

500

1,000

1,500

2,000

2,500

3,000

3,500

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

50

100

150

200

250

300

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

100

200

300

400

500

600

700

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-43

Figure A-39 Yuba River (New Bullards Bar Reservoir Inflow)

BIAS RMSE/Mean NSE

4.57% 59.91% 74.65%

0

100

200

300

400

500

600

700

800F

low

(TA

F/m

onth

)Simulated Historical

0

500

1,000

1,500

2,000

2,500

3,000

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

50

100

150

200

250

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

100

200

300

400

500

600

700

800

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

A-44

Figure A-40 Yuba River at Smartville

BIAS RMSE/Mean NSE

9.28% 57.61% 76.04%

0

200

400

600

800

1,000

1,200

1,400

1,600F

low

(TA

F/m

onth

)Simulated Historical

0

1,000

2,000

3,000

4,000

5,000

6,000

Flo

w (

TA

F/Y

ear)

Simulated Historical

0

50

100

150

200

250

300

350

400

450

500

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep

Flo

w (

TA

F/m

onth

)

Simulated

Historical

0

200

400

600

800

1,000

1,200

1,400

1,600

0%10%20%30%40%50%60%70%80%90%100%

Flo

w (

TA

F/m

onth

)

Simulated Historical

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