a liver model for chemoprotection against malaria · results a liver model for chemoprotection...

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Results A Liver Model for Chemoprotection Against Malaria Mohammed H. Cherkaoui 1 , Nicole Andenmatten 1 , Rolf Fendel 2 , Lydia Burgert 3,4 , Chiara Fornari 5 , Michael Gabel 6 , Oluwaseun F. Egbelowo 7 , John Ward 8 , Jörg Möhrle 1 , Nathalie Gobeau 1 1 MMV, Geneva, Switzerland, 2 University of Tübingen, Tübingen, Germany, 3 STPH, Basel, Switzerland, 4 University of Basel, Basel, Switzerland, 5 AstraZeneca, Cambridge, UK , 6 University of Heidelberg, Heidelberg, Germany, 7 University of Witwatersrand, Johannesburg, South Africa & 8 University of Loughborough, Loughborough, UK Background Malaria is a deadly parasitic threat and to prevent the disease, it is important to protect people from infection, particularly from Plasmodium falciparum, which is the most prevalent human malaria strain in Africa. Chemoprotective drugs are developed for this purpose. These should be taken at regular intervals for as long as a person is at risk. The intervals should be infrequent, ideally monthly. To reach this goal, the drug must kill the parasites not only during blood-stage but also during development in the liver, the first stage of infection after an infectious mosquito bite. Whilst PKPD models have been developed to understand and describe the blood-stage activity of potential antimalarials, hardly any model has been proposed for liver-stage activity. In vitro [1] and preclinical in vivo [2, 3] experiments have been developed to assess the efficacy of drugs on the liver- stage, as well as a liver-stage controlled human malaria infection model (CHMI). However, what makes it difficult to obtain a PKPD model for liver-stage activity is that unlike for blood-stage, where direct measurement of the infection load is possible, this is technically not feasible for liver-stage parasites. Objective To develop a PKPD model to describe the drug killing effect on the liver-stage parasites. DSM265, a plasmodial di- hydroorotate dehydrogenase (DHODH) inhibitor, which is currently in development, is chosen as an example to illustrate the approach. Methods Data: Two liver-stage Controlled Human Malaria Infection (CHMI) studies (Table 1) were conducted to evaluate the prophylaxis efficacy of DSM265. A 400mg single dose, or placebo, was administered 1, 3 or 7 days to healthy volunteers before I.V. injection of 3200 sporozoites or 5 bites from infected mosquito. DSM265 concentration (Fig. 1A) and blood-stage parasitemia (Fig. 1B) were measured in all participants [4]. Mathematical Model: Only a fraction F inv of the injected sporozoites are assumed infectious. At 6.8 day after infection the parasites are transferred from liver to blood [5]. Assuming exponential growth and every sporozoite leads to 30,000 merozoites in 6.8 days, the parasite growth rate in the liver was estimated to be k gr,L = 0.0632 hour -1 . Blood activity parameters were fixed from a previous blood-stage CHMI study (Table 2). E max,L was not estimated due to a high correlation between E max,L and EC 50,L (not shown), but fixed to the blood-stage value. F inv was estimated to be 0.17%, which translates to 5-6 hepatocytes that have been infected (Table 3). No False-Negative are predicted (Fig. 3 & Table 4 ) References Study, Cohort # # Subjects (Placebo) Treatment Day Vehicle Inoculation Tübingen #1 8 (2) -7 I.V. 3200 p. Tübingen #2 7 (2) -1 I.V. 3200 p. Seattle #1 8 (2) -7 I.V. 3200 p. Seattle #2 8 (2) -3 I.V. 3200 p. Seattle #3 8 (2) -7 Mosquitoes 5 bites Figure 1: Example of CHMI data; (A) PK data after a 400mg single dose of DSM265, (B) Parasitemia data of volunteers who received DSM265 or placebo 3 days prior sporozoite inoculation. Table 1: Summary of the CHMI data for DSM265 Figure 2: Schematic representation of the PKPD model for chemoprotection, and its equations. P L and P B being the parasitemia in the Liver and the Blood, respectively. The effect of DSM265 on the liver- stage and in the blood–stage is assumed to be driven by the blood concentration. Parameter Units Value k gr,B 1/h 0.068 E max,B 1/h 0.202 EC 50,B ng/mL 1660 γ B - 2 Table 2: PD parameters of DSM265 for blood-stage. Results from a previous blood-stage CHMI study True False Total Positive 51.7% 20.7% 72.4% Negative 27.6% 0% 27.6% Total 79.3 20.7% 100% Figure 3: Individual fit examples of parasitemia data; The red and blue lines represent the population and individual predictions, respectively. The two plots on the left are true positives, the top right a true negative and the bottom right a false positive. [1] March, S. et al.: A Microscale Human Liver Platform that Supports the Hepatic Stages of Plasmodium falciparum and vivax. Cell Host Microbe. 14, 104–115 (2013). [2] Vaughan, A.M. et al.: Complete Plasmodium falciparum liver-stage development in liver-chimeric mice. J. Clin. Invest. 122, (2012). [3] Vaughan, A.M. et al.: Plasmodium falciparum genetic crosses in a humanized mouse model. Nat. Methods. 12, 631–633 (2015). [4] Sulyok, M. et al.: DSM265 for Plasmodium falciparum chemoprophylaxis: a randomised, double blinded, phase 1 trial with controlled human malaria infection. Lancet Infect. Dis. 17, 636–644 (2017). [5] Coffeng L. E. et al.: The Power of Malaria Vaccine Trials Using Controlled Human Malaria Infection. PLoS Computational Biology. 13(1) (2017). A B Figure 4: Population prediction of the effect of DSM265 on liver parasitemia (A) and blood parasitemia (B) for different day of administration prior sporozoite injection. A B Figure 5: Comparison between the observed and predicted success for each day of administration: (A) With and (B) without a cure threshold applied for blood parasitemia. Success defined as no parasitemia observed at day 28 (i.e. Parasitemia<LLOQ), whereas having a cure threshold means that if the parasitemia goes under this value, the parasites stop growing. Conclusions Findings : By combining blood-stage and liver- stage CHMI, the PKPD relation was relatively well described (Fig. 5A). Including a cure threshold during the blood-stage improved the prediction. What’s Next? Can the cure threshold be better defined? Should one be defined for the liver-stage? Test the effect of the assumptions in the liver growth; e.g. sensitivity to k gr,L or time to release in the blood stream. Incorporate in vitro/in vivo data to enrich the model. Develop a more mechanistic model to describe liver-stage growth. Parameter Units Value k gr,L 1/h 0.063 (Fixed) E max,L 1/h 0.202 (=E max,B ) EC 50,L ng/mL 2950 γ L - 2 (=γ B ) F inv % 0.17 Table 3: Estimation results using Monolix v4.3.3. Table 4: Summary of the individual prediction. = , , . γ 50, γ + γ = , , . γ 50, γ + γ + =ቊ 0 if < + 6.8 days otherwise ≈6.8 days After Infection Liver Parasitemia Blood Parasitemia Drug Effect in Liver Stage Drug Effect in Blood Stage Measured Model available for DSM265 What we need to describe/estimate Not Measured, but qualitative idea of its dynamic k gr,B k gr,L Inoc. F inv Definitions: True Positive: Blood parasitemia observed and predicted False Positive: Blood parasitemia predicted but not observed True Negative: Blood parasitemia neither observed nor predicted False Negative: Blood Parasitemia observed but not predicted

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Page 1: A Liver Model for Chemoprotection Against Malaria · Results A Liver Model for Chemoprotection Against Malaria Mohammed H. Cherkaoui1, Nicole Andenmatten1, Rolf Fendel2, Lydia Burgert3,4,

Results

A Liver Model for Chemoprotection Against Malaria

Mohammed H. Cherkaoui1, Nicole Andenmatten1, Rolf Fendel2, Lydia Burgert3,4, Chiara Fornari5, Michael Gabel6, Oluwaseun F. Egbelowo7, John Ward8, Jörg Möhrle1, Nathalie Gobeau1

1MMV, Geneva, Switzerland, 2University of Tübingen, Tübingen, Germany, 3STPH, Basel, Switzerland, 4University of Basel, Basel, Switzerland, 5AstraZeneca, Cambridge, UK , 6University of Heidelberg, Heidelberg, Germany, 7University of Witwatersrand, Johannesburg, South Africa & 8University of Loughborough, Loughborough, UK

BackgroundMalaria is a deadly parasitic threat and to prevent the disease, it is important to protect people from infection, particularlyfrom Plasmodium falciparum, which is the most prevalent human malaria strain in Africa. Chemoprotective drugs aredeveloped for this purpose. These should be taken at regular intervals for as long as a person is at risk. The intervalsshould be infrequent, ideally monthly. To reach this goal, the drug must kill the parasites not only during blood-stage butalso during development in the liver, the first stage of infection after an infectious mosquito bite.

Whilst PKPD models have been developed to understand and describe the blood-stage activity of potentialantimalarials, hardly any model has been proposed for liver-stage activity.

In vitro [1] and preclinical in vivo [2, 3] experiments have been developed to assess the efficacy of drugs on the liver-stage, as well as a liver-stage controlled human malaria infection model (CHMI). However, what makes it difficult toobtain a PKPD model for liver-stage activity is that unlike for blood-stage, where direct measurement of the infection loadis possible, this is technically not feasible for liver-stage parasites.

Objective

To develop a PKPD model todescribe the drug killing effecton the liver-stage parasites.DSM265, a plasmodial di-hydroorotate dehydrogenase(DHODH) inhibitor, which iscurrently in development, ischosen as an example toillustrate the approach.

Methods

Data:➢ Two liver-stage Controlled Human

Malaria Infection (CHMI) studies(Table 1) were conducted to evaluatethe prophylaxis efficacy of DSM265.

➢ A 400mg single dose, or placebo, wasadministered 1, 3 or 7 days to healthyvolunteers before I.V. injection of3200 sporozoites or 5 bites frominfected mosquito.

➢ DSM265 concentration (Fig. 1A) andblood-stage parasitemia (Fig. 1B)were measured in all participants [4].

Mathematical Model:➢ Only a fraction Finv of the injected

sporozoites are assumed infectious.

➢ At 6.8 day after infection theparasites are transferred from liverto blood [5].

➢ Assuming exponential growth andevery sporozoite leads to 30,000merozoites in 6.8 days, the parasitegrowth rate in the liver wasestimated to be kgr,L= 0.0632 hour-1.

➢ Blood activity parameters were fixedfrom a previous blood-stage CHMIstudy (Table 2).

➢ Emax,L was not estimated due to a high correlationbetween Emax,L and EC50,L (not shown), but fixed to theblood-stage value.

➢ Finv was estimated to be 0.17%, which translates to 5-6hepatocytes that have been infected (Table 3).

➢ No False-Negative are predicted (Fig. 3 & Table 4 )

References

Study, Cohort #

# Subjects (Placebo)

TreatmentDay

Vehicle Inoculation

Tübingen #1 8 (2) -7 I.V. 3200 p.

Tübingen #2 7 (2) -1 I.V. 3200 p.

Seattle #1 8 (2) -7 I.V. 3200 p.

Seattle #2 8 (2) -3 I.V. 3200 p.

Seattle #3 8 (2) -7 Mosquitoes 5 bitesFigure 1: Example of CHMI data; (A) PK data after a 400mg single doseof DSM265, (B) Parasitemia data of volunteers who received DSM265 orplacebo 3 days prior sporozoite inoculation.

Table 1: Summary of the CHMI data for DSM265

Figure 2: Schematic representation of the PKPD model forchemoprotection, and its equations. PL and PB being the parasitemia inthe Liver and the Blood, respectively. The effect of DSM265 on the liver-stage and in the blood–stage is assumed to be driven by the bloodconcentration.

Parameter Units Value

kgr,B 1/h 0.068

Emax,B 1/h 0.202

EC50,B ng/mL 1660

γB - 2

Table 2: PD parameters ofDSM265 for blood-stage.Results from a previousblood-stage CHMI study

True False Total

Positive 51.7% 20.7% 72.4%

Negative 27.6% 0% 27.6%

Total 79.3 20.7% 100%

Figure 3: Individual fit examples of parasitemia data; The red and bluelines represent the population and individual predictions, respectively.The two plots on the left are true positives, the top right a true negativeand the bottom right a false positive.

[1] March, S. et al.: A Microscale Human Liver Platform that Supports the Hepatic Stages of Plasmodium falciparum and vivax. Cell Host Microbe. 14, 104–115 (2013). [2] Vaughan, A.M. et al.: Complete Plasmodium falciparum liver-stage development in liver-chimeric mice. J. Clin. Invest. 122, (2012). [3]Vaughan, A.M. et al.: Plasmodium falciparum genetic crosses in a humanized mouse model. Nat. Methods. 12, 631–633 (2015). [4] Sulyok, M. et al.: DSM265 for Plasmodium falciparum chemoprophylaxis: a randomised, double blinded, phase 1 trial with controlled human malaria infection. Lancet Infect.Dis. 17, 636–644 (2017). [5] Coffeng L. E. et al.: The Power of Malaria Vaccine Trials Using Controlled Human Malaria Infection. PLoS Computational Biology. 13(1) (2017).

A B

Figure 4: Population prediction of the effect of DSM265 on liver parasitemia (A) and blood parasitemia (B) fordifferent day of administration prior sporozoite injection.

A B

Figure 5: Comparison between the observed and predicted success for each day of administration: (A) With and (B) without acure threshold applied for blood parasitemia. Success defined as no parasitemia observed at day 28 (i.e. Parasitemia<LLOQ),whereas having a cure threshold means that if the parasitemia goes under this value, the parasites stop growing.

Conclusions

Findings:▪ By combining blood-stage and liver-

stage CHMI, the PKPD relation wasrelatively well described (Fig. 5A).

▪ Including a cure threshold during theblood-stage improved the prediction.

What’s Next?▪ Can the cure threshold be better

defined? Should one be defined forthe liver-stage?

▪ Test the effect of the assumptions inthe liver growth; e.g. sensitivity tokgr,L or time to release in the bloodstream.

▪ Incorporate in vitro/in vivo data toenrich the model.

▪ Develop a more mechanistic modelto describe liver-stage growth.

Parameter Units Value

kgr,L 1/h 0.063 (Fixed)

Emax,L 1/h 0.202 (=Emax,B)

EC50,L ng/mL 2950

γL - 2 (=γB)

Finv % 0.17

Table 3: Estimation results using Monolixv4.3.3.

Table 4: Summary of the individual prediction.

𝑑𝑃𝐿

𝑑𝑡= 𝑃𝐿 𝑘𝑔𝑟,𝐿 −

𝐸𝑚𝑎𝑥,𝐿 . 𝐶γ𝐿

𝐸𝐶50,𝐿γ𝐿 + 𝐶γ𝐿

−𝑖𝑛𝑝𝑢𝑡𝐿𝐵

𝑑𝑃𝐵

𝑑𝑡= 𝑃𝐵 𝑘𝑔𝑟,𝐵 −

𝐸𝑚𝑎𝑥,𝐵. 𝐶γ𝐵

𝐸𝐶50,𝐵γ𝐿 + 𝐶γ𝐵

+𝑖𝑛𝑝𝑢𝑡𝐿𝐵

𝑖𝑛𝑝𝑢𝑡𝐿𝐵 = ቊ0 if 𝑡 < 𝑇𝑖𝑛𝑓𝑒𝑐𝑡𝑖𝑜𝑛 + 6.8 days

𝑘𝐿𝐵𝑃𝐿 otherwise

≈6.8 daysAfter Infection

LiverParasitemia

Blood Parasitemia

Drug Effect in Liver Stage

Drug Effect in Blood Stage

Measured

Model available for DSM265

What we need to describe/estimate

Not Measured, but qualitative

idea of its dynamic

kgr,Bkgr,L

Inoc.Finv

Definitions:• True Positive: Blood parasitemia observed and predicted• False Positive: Blood parasitemia predicted but not observed• True Negative: Blood parasitemia neither observed nor predicted• False Negative: Blood Parasitemia observed but not predicted