2013 asprs track, monitoring ponderosa pine health using satellite imagery by kathleen johnson

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DigitalGlobe Proprietary and Business Confidential Monitoring Ponderosa Pine Health Using Satellite Imagery

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In recent years, forested areas along the foothills of the Colorado Front Range have been subject to parasite infestations and drought conditions that have stressed these systems. The focus of this study are the Ponderosa Pines (Pinus ponderosa) of the Jefferson County Parks and Open Space, which show the accumulated effects of infestation by Dwarf Mistletoe (Arceuthobium vaginatum cryptopodum), Mountain Pine Beetle (Dendroctonus ponderosae), and drought conditions that began in the Fall of 2011. Numerous studies have demonstrated the effectiveness of satellite imagery analysis for the monitoring of parasite infestations and general forest health. We have examined WorldView-2 satellite imagery from 2010-2013, confirmed by ground truth provided by Jefferson County Parks and Open Space for White Ranch Park and Elk Meadow Park. The research approach included the examination of data optimization methods for spectral identification of affected trees using 8-band data (e.g., normalized band ratios, principal component analysis, maximum noise fraction, and statistical validation), decision tree land cover classification methods, and change detection. The results of supervised classification analysis of Ponderosa Pine health have an accuracy of > 90% and a precision of 0.89 (Kappa Statistic). High accuracy land cover mapping is critical for parasite mitigation, and efforts to minimize future infestations. This project is part of an ongoing a partnership between Jefferson County Parks and Open Space and DigitalGlobe, monitoring vegetation health, invasive species and parasite activity for the purpose of long-range remediation planning.

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Page 1: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Monitoring Ponderosa Pine Health Using Satellite Imagery

Page 2: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

DigitalGlobe 2

• Kathleen Johnson*

• Greg Hammann

• Rachana Ravi

*[email protected]

• Keith Bol

• Barbara Morey

Monitoring Ponderosa Pine Health Using Satellite Imagery

Team Participants:

Page 3: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Goals & Objectives

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• To Demonstrate the capabilities of WV02 8-bands for vegetation health/stress assessments

• Document the extent of tree stress from 2010 through 2013 in the White Ranch Park Area, using satellite imagery.

• Test Case for DG classification system applied to vegetative health studies

• Look for evidence of new Mountain Pine Beetle Activity

DigitalGlobe

Page 4: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

4

World View-2

DigitalGlobe

TABLE 1: WorldView -2 Bands

Band

#

Name Wavelength

(nm)

1 Coastal 400-450

2 Blue 450-510

3 Green 510-580

4 Yellow 585-625

5 Red 630-690

6 Red Edge 705-745

7 NIR1 770-895

8 NIR2 860-1040

PAN Panchromatic 450-800

Page 5: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Jefferson County Preliminary Study: Elk Meadow Park

5 DigitalGlobe

Page 6: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

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Elk Meadow: Dwarf Mistletoe Damage

6

False Color: Healthy Trees are Bright Red

Natural Color: Damage is Visible

DigitalGlobe

JUNE 2010 JUNE 2012

Page 7: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Jefferson County Research Site: White Ranch Park

7 DigitalGlobe

Page 8: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Ground Truth Assumptions:

8

•Ground Truth for Dwarf Mistletoe acquired December 2010 (Rawhide and Sawmill Ridges)

• Treatment for mistletoe control started after ground truth acquisition (Spring 2011-Present)

•Mountain Pine Beetle was discovered during the Winter Survey in 2010, and treatment began at that time.

DigitalGlobe

Page 9: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

White Ranch Park: Ground Truth

9 DigitalGlobe

Page 10: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Parasites:

10

Dwarf Mistletoe (Arceuthobium vaginatum)

Mountain Pine Beetle (Dendroctonus ponderosae)

DigitalGlobe

Page 11: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Pre-Processing:

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• Imagery Selection (4): - 10JUNE24, 11AUGUST23, 12MAY24, 13AUGUST14

•Bundle Adjustment -Orthorectification (30 m DEM)

-Co-registration

•Atmospheric Correction (DG-ACOMP)

DigitalGlobe

Page 12: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

12

Normalized Difference Vegetation Index (NDVI)

NDVI = (rNIR – rRED)/(rNIR + rRED) Brightness = Health

Vegetative Indices

DigitalGlobe

TABLE 4. Summary of Vegetative Indices applied to the JCOS Forestry Problem

Index Formula Bands Reference

Normalized Difference

Vegetative Index NIR1 NDVI-1

(NIR1 - Red)/(NIR1 + Red)

7-5 Rouse et al. (1974)

Shamsodinni et al. (2010)

Normalized Difference

Vegetative Index NIR2 NDVI-2

(NIR2 - Red)/(NIR2 + Red)

8-5 Rouse et al. (1974)

Shamsodinni et al. (2010)

Red Edge NDVI (Red Edge - Red)/(Red Edge + Red) 6-5 Filchev (2010)

Page 13: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

13

JUNE 2010 AUGUST 2013 CHANGE

NDVI Results & Change Detection

DigitalGlobe

Table 7. Change Detection Color Codes

BLUE Negative Change:

YELLOW Neutral/Positive Change:

Page 14: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Classification Model:

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•DG Classification-Supervised

•Decision Tree Classifiers: • Robust to outliers

• Applies the same rule at each Node

• Compares well to Non-linear Classifiers

• Random Forest – Ensemble Tree Method • (Random Forest: Breiman 2001)

•Use WEKA Scorer to Evaluate Models • http://www.cs.waikato.ac.nz/ml/weka/

DigitalGlobe

Page 15: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Random Forest – 20 Trees:

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•A stable model builder with little data preprocessing

•Does not require a normal distribution

• Relies upon balanced class sample size

• Ensemble decision tree method (employs multiple trees)

•Most robust decision tree method for outliers

• Competitive with nonlinear classifiers such as neural networks

DigitalGlobe

Page 16: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

16

Classification Results: Accuracy and Precision

DigitalGlobe

Imagery Accuracy Kappa Statistic

10JUNE24 93.17 0.92

11AUG23 93.47 0.92

12MAY24 93.88 0.93

13AUG14 89.69 0.88

95% Confidence Interval

Page 17: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Ponderosa Health: Random Forest-20

17

10JUNE24 11AUGUST23

DigitalGlobe

Table 8. Classification Codes

ORANGE Unhealthy/Stressed

GREEN Healthy

Yellow-Green Broadleaf

12MAY24 13AUGUST14

Page 18: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Ponderosa Health: Random Forest-20

18

10JUNE24 11AUGUST23

DigitalGlobe

Table 8. Classification Codes

ORANGE Unhealthy/Stressed

GREEN Healthy

Yellow-Green Broadleaf

Page 19: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Ponderosa Health: Random Forest-20

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12MAY24 13AUGUST14

DigitalGlobe

Table 8. Classification Codes

ORANGE Unhealthy/Stressed

GREEN Healthy

Yellow-Green Broadleaf

Page 20: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Ponderosa Health: Pine Beetle Treatment

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10JUNE24 11AUGUST23

DigitalGlobe

Table 8. Classification Codes

ORANGE Unhealthy/Stressed

GREEN Healthy

Yellow-Green Broadleaf

Page 21: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Ponderosa Health: Pine Beetle Treatment

21

12MAY24 13AUGUST14

DigitalGlobe

Table 8. Classification Codes

ORANGE Unhealthy/Stressed

GREEN Healthy

Yellow-Green Broadleaf

Page 22: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

DigitalGlobe 22

Summary of Classification Results

10JUNE24 11AUGUST23 12MAY241 3AUGUST14

Page 23: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

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Conclusions:

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• Ponderosa Pines within White Ranch Park have shown signs of accumulated stress: - Mistletoe,

- Pine Beetle

- Drought (Fa11 2011-Spring 2013)

- Tree stress was severe enough to be visible in natural color imagery in many instances.

- Through time, the total number of trees has been reduced by remediation activities

• DG Classification results were more reliable than NDVI Change Detection: - Performed at > 90% accuracy except in the case of the 2013, where some of

the ground truth had been removed by mistletoe remediation.

DigitalGlobe

Page 24: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Conclusions:

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• This Study lays the foundation for continuing forestry studies across the Foot Hills region, using satellite imagery:

- Identify additional areas to be examined for mistletoe infestation and

remediation

- Can identify potential Pine Beetle attacks early IF we can capture imagery during the proper stages of the Life Cycle (need March snow free imagery)

DigitalGlobe

Page 25: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Acknowledgments:

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• JCOS: Keith Bol, Barbara Morey

• Project Sponsor: Kumar Navulur, NGP Director

• My Manager: Giovanni Marchisio, Data Mining Director

• DG Classification Training: Rachana Ravi, Kris Koperski

• Data Pre-Processing: Chuck Chaapel, Donnie Marino

DigitalGlobe

Page 26: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson

DigitalGlobe Proprietary and Business Confidential

Thank You Questions/Discussion

Page 27: 2013 ASPRS Track, Monitoring Ponderosa Pine Health Using Satellite Imagery by Kathleen Johnson