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Clinical treatment of bacterial infections Debra Wollner, PhD Southwest College of Naturopathic Medicine Tempe, AZ

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Clinical treatment of bacterial

infectionsDebra Wollner, PhD

Southwest College of NaturopathicMedicine

Tempe, AZ

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Lecture objectives

• At the end of this lecture, students will be able to

 – Identify when the use of antibiotics may be indicated

 – Identify the correct antibiotic to use for a given

infection/infectious organism – Recognize when the incorrect antibiotic has been

prescribed

• Due to contraindications/precautions

• Due to mis-application of medication

 – Identify common and serious side effects associatedwith given antibiotics

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Terminology

• Anorexia

• Nausea

Vomiting• Bloating

• Diarrhea

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Principles of treatment

• Is an antibiotic indicated• What organisms are most likely

• Have a list of local infectious organisms and their susceptibilities

• How to choose the most appropriate antibiotic• Is a combination appropriate

• Tuberculosis, H.Pylori and HIV always use combo

• Important host factors• Allergy, side effects, organ system disease

• Best route of administration• Oral easiest, topical possible, im?

• Appropriate dose• Duration of therapy• Resistance? Side effects?

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When to use bacteriocidal drugs

• Immunosuppressed

• Life threatening dz

 – Meningitis

 – Endocarditis

 – Osteomyelitis

 – Pseudomonas in cystic fibrosis

Bacteriostatic won’t cut it in these cases 

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How long should an infection be

treated?

• A guess

• 3 days enough for most infections in healthy

individual

• 10 day or more necessary for the chronically ill andimmunosuppressed

• 10 days necessary for strep throat

 –

Currently• Diabetic infections generally require longer term (2-3

weeks)

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ANTIBIOTIC TREATMENT

Specific bacterial infections

RTI, ABECB, CAP, UTI, skin, GI

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RESPIRATORY TRACT INFECTIONS

PharyngitisSinusitis

Otitis

Bronchitis

Pneumonia

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PHARYNGITIS

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RTI’s - Pharyngitis

• 5-15% adult sore throats group A b hemolyticstrep

• 15-30% children sore throats group A b hemolyticstrep

• All other most likely caused by a virus or otheruntreatable microbe

• Treatment recommended to prevent lifethreatening complications – Rheumatic fever

• Symptomatic relief felt rapidly only if treatedwithin 48 hours of onset of symptoms

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RTI’s - When to treat pharyngitis

• Four predictors of A b hemolytic strep – Pharyngeal/tonsillar exudate

 – Tender anterior cervicallymphadenopathy

 – Fever or history of fever – Absence of cough

• Clinical treatmentguidelines – Patients with 3-4 criteria

40-60% positive predictivevalue

 – Absence of 3-4 criteri• 80% negative predictive value

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Guidelines for treatment

• Patient positive for 2-4 criteria

 – Perform RAT

 – If positive, begin treatment

• Patient positive for 3-4

 – No RAT needed

 – Treatment recommended

• Must confirm RAT, either + or -

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Treatment for pharyngitis (+)

• Penicillin (oral) – Pen V250 mg bid in children

 – Pen V 500 mg bid or 250 mg quid in adults

 – OR Pen G benzathine im 1.2 million U once

 – Amoxicillin liquid for children unable to swallow oralpills

 – Cephalosporins also effective

• 10 days

• 5 days azithromycin sometimes useful

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URI

Coughs and colds

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Upper Respiratory Infection

• Strep pneumonia – URI

• Otitis

• Sinusitis

• Pneumonia

• Group A – Strep throat

 – Cellulitis

• Group B –

Neonatal sepsis – Chronic adult skin infection

 – UTI

 – Diabetic foot

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URI infections

• Usually

 – H.influenza, S.pneumoni, M.catarrhalis,

C.pneumococcus

• Choice of medication

 – First doxycycline (could destroy child liver)

 – Second cefpodoxixime or cefdinir

 – Third amoxicillin/clavulanic acid

 – Last choice quinolones $500! Harms joints

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ACUTE RHINOSINUSITIS

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Acute rhinosinusitis

• Predictive characteristics

 – Symptoms lasting > 7 days

 – Maxillary facial or tooth pain or tenderness

 – Purulent nasal discharge

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Acute rhinosinusitis

• Cause

• S.pneumonia or H.influenza

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Treatment

• Doxycycline – 1/day for 7-10 days

 – Not in pregnancy

 – Not in children

• Amoxicillin – Up to 50% resistant strains

 – Use amoxiciliin plus clavulanic acid

 – Or cephuroxime or cefposoxime

• Cotrimoxazole (TMP+SMZ) – Many strains are resistant

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Resistance

• Strep pneumo usu resistant to PCN due to

decreased uptake

• May use double the dose to overcome

resistance

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BRONCHITIS

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Acute bronchitis

• Most cases are viral

• No antibiotic indicated

Bacterial bronchitis – Mycoplasma or Chlamydia pneumonia

 – In an outbreak, could be Bordatella pertussis

• Erythromycin

• 2005 last outbreak in AZ

• Outbreaks (2010) in northern CA, TX

 – No evidence for S. pneumo, H. influenza or M.catarrhalis

• Doxycycline not generally useful

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When to treat acute bronchitis

• Bordetella pertussis

• Atypical presentation in immunized population

• Outbreaks every 2-5 years, summer/fall

• Persistent chronic cough without whoop or post-tussive

vomiting – Lasts several weeks

 – Starts as a cold, progresses to severe cough, then convalescentphase

 – 5-7 day incubation period

• Treatment recommended to reduce contagion – Erythromycin

• Rarely seen in the absence of an outbreak

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INFLUENZAVIRAL TREATMENTS

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Anti-viral treatment of influenza

• Will decrease the course of the infection by 1 day

• Must begin treatment within 48 hours of onset

• Amantadine, rimantadine

 – Influenza A only

• Zanamivir, oseltamavir

 – Influenza A and B

Prophylaxis recommended for high risk patientsduring outbreak, and during the 14 day postimmunization period

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Treatment guidelines non specific URI

• Usually viral

 – May have sinus, pharyngeal and lower airways

symptoms

 – May see green nasal discharge, tonsillar exudateand green phlegm

• No antibiotic treatment indicated

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Treatment guidelines ABECB

• Acute bacterial exacerbation of chronicbronchitis

• Cough producing sputum

Mucous hypersecretion and hypertrophy of submucosalglands

• Decreased mucociliary clearance, loss of ciliated cells andincreased secretions

• Functional airway inflammation and narrowing

• Not reactive airway disease (asthma)

• Not chronic bronchitis (usually associated with smoking)

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Treatment guidelines ABECB

• CBC with differential

• If see shift to left

Leukocytosis• May see immature cells (blasts)

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Treatment of ABECB

• Probably H.flu, S.pneumo, M.cat or

C.pneumoniae

• Doxycycline first choice

• Or cefpodoxime, cefdinir

• Amoxacillin +clavulanic acid

TMP/SMZ• Last choice quinolones

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OTITIS MEDIA

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Acute otitis media

• Spontaneous resolution likely within 3-5 days

• Treatment with antibiotic NOT recommended

 – even if you see a bulging, pusy eardrum

• If Strep pneumo, then amoxicillin is likely to be

effective

• But could become mastoiditis

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Acute otitis media

• If amoxicillin does not clear the infection• Consider S.pneumo, H.flu, M.cat

• Amoxicllin/clavulanate

• Cefuroxime

• Cefrtriaxone

• Doxycycline (adults)

• For pen allergy – Clindamycin + cotrimoxazole

• However• 10% S.pneumo resistant to clindamycin

• 40% resistant to TMP/SMZ

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PNEUMONIA

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CAP community acquired pneumonia

• Likely S.pneumoniae, H.influenzae, M.catarrhalis,

• Mycplasma pneumoniae

 – Sudden onset, severe pain

• Chlamydia pneumoniae

• Legionella sp (in outbreaks)

• Staph aureus

 – In diabetes, or in nursing homes

• Enterobacteriaceae

 – In nursing homes

• Pseudomonas

 – Bronchiectasis, chronic steroid use

• Oral anearobes – Aspiration prone patients

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Treatment of CAP

• Doxycycline

• Macrolide/azalide – Some S.pneumo and H.flu is resistant

• Cefuroxime – Some resistance among atypical bacterial causes

• Cefpodoxime – Some resistance among atypicals

• Amoxicillin/clavulanate – Some resisitance among atypicals

• Amoxicillin alone – 30% H.flu, most M.cat resistant

• 3rd/4th generation quinolones – Resistance developing

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PRSP

• Penicillin resistant Strep Pneumoniae

• May still use penicillin and cephalosporin

• Generally recommended

 – Amoxicillin, amoxicillin/clavulanat, crfuroxime

 – Clarithro/azithromycin

 – Doxycycline

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Macrolide resistant Strep pneumoniae

• High level of resistance

• Possible mechanisms of resistance

 – Efflux

 – Blocked binding to ribosome

• 20-30% Strep pneumo resistant

• >95% H.influenzae resistant

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Telithromycin/Ketek

• Useful for ABECB, CAP, bacterial sinusistis

• Effective against multidrug resistance

Strep.pneumo

• Caution

 – Associated with acute liver failure

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Legionnaires

• Outbreaks

• Susceptible population

• Treatable with macrolides

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Case study strep throat

• 15 year old patient presents with severe sore

throat, inability to speak above a whisper,

duration >1 week. Throat shows pus filled

blisters.

• Response?

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Response

• What is the microbe?

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What is the microbe?

• If positive, then what?

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Positive strep

• What if allergy is present?

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Allergy to pen

• Comes back in a week, not feeling any better,now what?

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Erythromycin resistant

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Case study rhinosinusitis

• 37 year old female presents 1 month post

acute viral cold. Cold symptoms gone,

however facial pain on pressing cheeks, and

tooth pain when eating. Night-time andmorning cough, productive.

• Diagnosis?

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Diagnosis

• Organisms?

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Organisms

• Treatment, particularly in pen allergy?

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Treatment, particularly in pen allergy?

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Case study acute bronchitis

• FA, 35 year old female, persistent coughfollowing an acute respiratory viral infectionthat began 7 days ago. Nasal stuffiness and

sore throat resolved 3-4 days ago, coughpersisted, sputum thick and mucoid, burningsubsternal pain.

• Afebrile, course rales

• Diagnosis and treatment?

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Diagnosis and treatment?

• Patient returns in 1 week, now has a fever of

101, cough still remains.• Diagnosis and treatment?

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Diagnosis and treatment?

• If bacterial – What are the most likely organisms?

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What are the most likely organisms?

•  Treatment?

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Treatment

• What if patient is pregnant?

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What if patient is pregnant?

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UTI

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Common causes of UTI

• E.coli – 70-95%

• Staph.saprophyticus

 – 5-20%

• Other Enterobacteriaceae, proteus

 – 5-15%

• Enterococcus sp

 –

Low, but increasing – Found in bactrim and quinolone users

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UTI susceptibilities

• Depends on local factors

• Nitrofurantoin >99%

 – Dependable

• Newer Fluoroquinolones >99%• 2nd-3rd generation cephs >95%

• Trimethoprim plus sulfamethoxazole 3 days 80-90%

1st

 generation cephalosporins 60-70%• Amp or Amox <50-60%

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Nitrofurantoin

• Black box warning – ACUTE, SUBACUTE, OR CHRONIC PULMONARY 

REACTIONS HAVE BEEN OBSERVED INPATIENTS TREATED WITH NITROFURANTOIN.

IF THESE REACTIONS OCCUR, MACRODANTINSHOULD BE DISCONTINUED ANDAPPROPRIATE MEASURES TAKEN. REPORTSHAVE CITED PULMONARY REACTIONS AS ACONTRIBUTING CAUSE OF DEATH.

• Usually only seen on long term use• More of a concern with elderly

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Medicine 65

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Treatment guidelines UTI

• Uncomplicated cystitis

• Cotrimoxazole (TMP/SMZ) for 3 days

 – If sulfa allergy, use trimethoprim alone

• Nitrofurantoin 3-5 days or longer

• Quinolone for 3 days

Amox – 50% of the time doesn’t work 

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Medicine 66

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Treatment guidelines UTI

• Complicated cystitis

• Cotrimoxazole (TMP/SMX) >3day (longer

duration)

• Cephalexin >5-7 days

• Nitrofurantoin >5-7 days

• Quinolone > 3day

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Medicine 67

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Treatment guideline- UTI recurrences

• Low dose daily prophylaxis

• Post coital prophylaxis

• Patient self diagnosis and treatment

• Estrogen if postmenopausal

• Cranberries and probiotics

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Medicine 69

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CASE STUDY UTI

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Medicine 70

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UTI case study

• 22 year old woman presents with painful,urgent urination lasting 2 days.

• Your response?

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Response

• What are the most likely microbes?

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Now?

• Treatment?

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Pen allergy

• Sulfa allergy?

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To avoid development of quinolone

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To avoid development of quinolone

resistant microbes

• Don’t use quinolones 

• Other older medications work also

• May use quinolones when nothing else works

 – Cystic fibrosis pseudomonas

 – Chronic UTI

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DIARRHEA

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Medicine 77

ff

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Differential diagnosis- diarrhea

• Acute – Infections (bacterial, parasitic, viral) – Food poisoning – Medications

• Chronic (osmotic) – Secretory

• Congenital• Bacterial toxins• Ileal bile acid• Malabsorption•

IBD-UC, Crohn’s, diverticulitis• Chronic inflammatory

 – Many

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Medicine 78

f d h

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Major causes of acute diarrhea

•Bacterial – Bacilius cereus – Campylobacter

 – Clostridium difficile – Clostridium perfringens – Escherichia coli

Enterotoxigenic• Enteroinvasive• Enterohemorrhagic• 0157:H7

 – Listeria monocytogenes – Salmonella

 – Shigella – Staphylococcus aureus – Vibrio – Yersinia enterocolitis

• Parasites and protozoa – Crytposproidium

 – Cyclospora

 – Entamaeba histolytica

• Viruses – Adenovirus

 – Norwalk virus

 – Rotavirus

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Medicine 79

d h

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Acute diarrhea

• Many causes• Take history

 – # stools/day

 – Consistency

 – Volume

 – Degree of interference

• Determine cause

 – Associated with travel, food

 – Associated symptoms

• Dystentery, dehydration

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Medicine 80

ddi i l l

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Additional clues

Bloody stools – Salmonella, shigella, campylobacter, e.coli 0157, clostridium difficile, entamoeba histolytica

• Rectal pain – Campylobacter, salmonella, shigella, neisseria gonorrheae, herpes, chlamydia, E. histolytica

• Severe or persistent abdominal pain – Campylobacter, yersinia, clostridium perfringens, aeromonas

• Recent antibiotic therapy or chemotherapy – C. difficile, salmonella

• Travel (Mexico, Africa, Middle or Far East) – Enterotoxigenic Ecoli , others

• Family or friends affected – Food borne pathogens, staphylococcus

• Homosexual male – Herpes, Chlamydia, Treponema pallidum, E.histolytica, Shigell, Giardia, N.gonorrheae,

Cryptosporidium

•Hospital acquired – C. difficile

• Daycare centers, mental institutions – Giardia, C.difficile, Salmonella, Shigella, rotavirus

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Medicine 81

Community acquired or traveler’s

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Community acquired or traveler s

diarrhea

• Accompanied by fever or bloody stool

• Culture for Salmonella, Shigella,

Campylobacter, E.coli 0157, C.difficile

 – Shigella-quinolone

 – Resistant Campylobacter - macrolide

 – Avoid anti-motility agents and anti-microbials if

STEC suspected

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Medicine 82

N i l di h

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Nosocomial diarrhea

• Onset >3 days in hospital

• Test for C.difficile

 – Discontinue antibiotics if Positive

 – Consider metronidazole

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Medicine 83

P i di h ( 7d)

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Persistent diarrhea (>7d)

• Parasites possible

 – Particularly if immunocompromised

 – Giardia, cryptosporidium, Cyclospora, Isospora

belli

• If HIV positive

 – microsporidium or MAC likely causes

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Medicine 84

Q i l i t t C j j i

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Quinolone resistant C.jejuni

• Campylobacter leading cause of bacterial GEin US

• 80% of chickens are contaminated

• Sarafloxacin and enrofloxacin used in chicken

farming

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Medicine 85

T ll ’ di h

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Traveller’s diarrhea

• Mild – 1-2 stools/24 hours – No therapy

• Mild to moderate – >2 stools/24 hours –

If no distressing symptoms• Loperimide or bismuth

 – If distressing symptoms• Loperimide + fluoroquinolone 500 mg quinolone po bid up

to 3 days• Reassess

• Severe – Fever, bloody stool >6/24 hours – 400 mg norfloxacin bid 3-5 days

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Medicine 86

S l ll Shi ll C l b t

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Salmonella, Shigella, Campylobacter

• Erythromycin

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Medicine 87

T t t id li di h

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Treatment guidelines- diarrhea

• Rarely use antibiotic in acute

• Don’t use antibiotic if virus or E.coli  0157

• Quinolones don’t cover most common cause,

C.jejuni

• Traveler’s diarrhea may require quinolone

short course

• C.diff  requires metronidazole

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Medicine 88

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H.PYLORI

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Medicine 89

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Di i f H l i

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Diagnosis of  H.pylori

• Endoscopy (invasive) – Histology

 – Culture

 – CLO-test

• Non-invasive

 – Serum serology (IgG)

 – Saliva or urine test

 – Breath test for urea

 – Stool antigen HpSA

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Stool antigen test (HpSA)

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Stool antigen test (HpSA)

• Can test pre treatment

• Can test post treatment as proof of cure

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Non ulcer dyspepsia (NUD)

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Non-ulcer dyspepsia (NUD)

• Treatment controversial

• Rule out other causes

• Treat if H.pylori  positive

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H pylori treatment

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H.pylori  treatment

• Usually recommended together

• Bismuth subsalicylate 525 mg QID x 1week

(protects stomach lining)

• Metronidazole 250 mg QID x 1 week

• Tetracycline 500 mg QID x 1 week

• Omeprazole 20mg BID x 1 week (Proton

pump inhibitor - lowers stomach acidity)

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Antacids and interactions

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Antacids and interactions

• Acid stomach required for absorption of manydrugs

 – Digoxin, phenytoin, isoniazid, ketoconazole

Take the antacid 2 hours before or 2 hoursafter other drugs

• Cipro best taken 2 hours before antacids

Tetracyclines at least 2-3 hours before antacids

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Skin and soft tissue

Bacterial

Fungal

Viral

Skin and soft tissue bacterial

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Skin and soft tissue, bacterial

• Abscess must be drained

• Antibiotic treatment may be needed, if

cellulitis or deep tissue involved

• Skin infections almost always Staph.aureus

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Skin and soft tissue bacterial

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Skin and soft tissue, bacterial

• Routine erysipelas and cellulitis –  b hemolytic Strep., sometimes Staph. Aureus, less

commonly Gram Negative bacteria

 – PCN, erythro, cephalexin, clindamycin

• Impetigo – from sandbox –  b Strep

 – Treat with dicloxacillin (extended spectrum penicillin)instead of topically

• Bollous –  Staph

 – Treat with dicloxacillin

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Impetigo

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Impetigo

• Retapamulin/Altabax• Topical treatment approved for impetigo

• Derived from Clitopilus  passeckerionus 

• Inhibits 50S bacterial ribosomal subunit• Not approved for mucosal surfaces

• Do not use on large surface area

• Some irritation at application site• Preg B

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Medicine 99

Skin and soft tissue bacterial

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Skin and soft tissue, bacterial

• Folliculitis, furunculitis, carbunculitis – Staph.aureus +/- b hemolytic Strep

 – May need antibiotic if cellulitis or deep tissue involved

Human/animal bite• Treat skin flora and what’s in the mouth 

 – Amox alone, augmentin (amox+clavulanate) standard for

bites, PCN + dicloxacillin, cephalexin, clindamycin,

doxycycline – Macrolides won’t cover 

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Skin and soft tissue bacterial

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Skin and soft tissue, bacterial

• Augmentin (amoxicillin + clavulanate)

• In penicillin allergy

 – Use doxycycline or 2nd-3rd generation

cephalosporin – Don’t use macrolides, they won’t cover most

common causes

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MRSA

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MRSA

• Local wound cleansing and debridement must beaccompanied by antibiotic therapy.

• At least 10 days of

 –

Trimethoprim/sulfamethoxazole – Minocycline or doxycycline

 – Rifampin plus tmp/smz or minocycline or doxycycline

 – Vancomycin

 – Linezolide – standard today• Watch for myelosuppression

Yersinia pestis – the plague

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Yersinia pestis – the plague

Yersinia pestis

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Yersinia pestis

• Streptomycin• Gentamicin

• Tetracyclines

• Chloramphenicol• Doxycycline - standard

• Trimethoprin/sulfamethoxazole

• Associated treatments – Drain buboes

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OPHTHALMIC INFECTIONS

Ophthalmic products

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Ophthalmic products

• Bacitracin –GPC (S.aureus, S.pneumo.) – conjunctivitis

• Sulfonamides- GPC, hemoph

 – Conjunctivitis, allergenic

• Macrolides (erythro)- GPC

• Tetracyclines – GPC, hemoph, irritating

• Aminoglycosides- GNB, sensitizing

•Quinolones- GPC + GNB, broad, expensive

• Trimethoprim/polymyxin B +bacitracin/polymixin B

 – Cost effective, fewer toxicities of some others

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Ophthalmic

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Ophthalmic

• Avoid ophthalmic corticosteroids – Cause herpes keratitis

• Antiviral

 – Trifluridine

• Antifungal

 – Natamycin

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Neonatal conjunctivitis

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Neonatal conjunctivitis

• May be passed through vaginal birth

• Mother may not know of infection

• Possibly gonorrhea or chlamydia

• Many states routinely require treatment of

newborns with eye drops

 – Erythromycin

 – Silver nitrate (rarely used)

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Overview of the lecture

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Overview of the lecture

• Common bacterial infections

• Know when antibiotics are appropriate

• Know which antibiotic is most likely to be

effective

• Recognize problems of antibiotic use in

patients.