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Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science Project & Scripps Institution of Oceanography Lesson Study 2014

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Page 1: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Using authentic data to analyze genetic

variation in Antarctic sea stars.

Presentation created by Gisela Wolfe

Mar Vista High School 1

San Diego Science Project & Scripps Institution of Oceanography

Lesson Study 2014

Page 2: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Read: When you think of Antarctica, what types of organisms do you think of?

Imagine you are a science researcher in Antarctica, what would you study?

Read: When you think of Antarctica, what types of organisms do you think of?

Imagine you are a science researcher in Antarctica, what would you study?

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Bellringer

Page 3: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Copy: When I think of Antarctica, the types of organisms I think of are…

If I were a science researcher in Antarctica, I imagine I would study ……., because……

Copy: When I think of Antarctica, the types of organisms I think of are…

If I were a science researcher in Antarctica, I imagine I would study ……., because……

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Page 4: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Dr. Nerida Wilson, Scripps Institute of Oceanography

Page 5: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

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Page 6: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Unusually deep continental shelf

All terrestrial input comes via glaciers or wind

Coastline dominated by ice (14% rocky)

Seawater temperature very low

How does Antarctica differ from other continents?

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Page 7: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

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Page 8: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Giant Petrel

Charismatic VertebratesCharismatic Vertebrates 8

Page 9: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

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Page 10: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Black-browed albatross

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Page 11: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Using DNA to assess connectivity in

Antarctic marine invertebrates

Using DNA to assess connectivity in

Antarctic marine invertebrates

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Page 12: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

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Page 13: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

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Page 14: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

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Page 15: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

RV Nathaniel B Palmer94-meter (303 feet) research ship with icebreaking capability for the U.S. Antarctic Program.37 scientists, has a crew of 22, and is capable of 75-day missions

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Page 16: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

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Page 17: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Straits ofMagellan

Straits ofMagellan

FalklandIslands

FalklandIslands

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Page 18: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

What she collected and why?

Animals that were abundant

Animals that are known to occur along most of the Scotia Arc

Animals that have some data already available

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Page 19: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Blake Trawlafter

multibeaming

Main tool=

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Page 20: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

First Ice

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Page 21: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

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Page 22: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

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Page 23: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

‘normal’ haul‘normal’ haul

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Page 24: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Sometimes mud...Sometimes mud...24

Page 25: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

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Page 26: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

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Page 27: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

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Page 28: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Sea stars: Labidiaster spp.

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Page 29: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Sea stars: Porania antarctica

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Page 30: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

CrinoidsPromachocrinus spp.

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Page 31: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Sea cucumber Scotoplanes

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Page 32: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

IsopodGlyptonotus antarcticus

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Page 33: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

PycnogonidsColossendeis megalonyx

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Page 34: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

PolychaeteLaetmonice producta

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Page 35: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Sea UrchinSterechinus

antarcticus/agassizi

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Page 36: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

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Page 37: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Bivalves:Lissarca notorcadensis

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Page 38: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Observe pictures of 5 different organisms.

•What kind of observations can you make about the organisms in these pictures? •What characteristics do they share? •What is different about them?

 Individually, box A (I observe…)

Be ready to share out responses….

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Page 39: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

If you wanted to know how related these organisms are, what questions would you ask?

(Box A: My Questions: write responses individually ) 

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Page 40: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

If you wanted to know how related these organisms from different sampling sites are to each other, what questions would you ask? Box your best question.Chart all of your individual questions/response onto your group CHART PAPER BOX A. Reach consensus on and box your group’s best question.

 Be prepared to SHARE

OUT…CHART class share-out

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Page 41: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Now look at the sea stars set of pictures…•What observations can you make about them•What characteristics do they share•What is different about them

(Write responses individually in Box B “I observe”)

•If you wanted to know how related sea stars are what questions would you ask? •(Write responses individually in Box B “My Questions”)

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Page 42: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Sea stars set of pictures…•If you wanted to know how related sea stars are to each other, what questions would you ask?

•Students box your best question on your paper, and then chart your individual best question onto CHART PAPER BOX B.

•Reach consensus and box your group’s best question.

•GALLERY WALK

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Page 43: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Genetic Data“Now look at the data of the sea stars. What information does this table tell you?”(Individually, box C “I observe”) Write down questions about data •(Individually, box C “My Questions”) Chart your individual questions/response onto CHART PAPER BOX C.  SHARE OUT…CHART IT AS A CLASS

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Page 44: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Genetic Data

•Using the data, physically arrange sea stars based on how related you think they are. •Note: connection between the genetic differentiation and the numbers is the smaller the number the closer related.

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Page 45: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Map1. Compare your grouping of the sea stars that you made on the table to their location on the map.

• What do you notice about the genetic data and their location on the map?

•(Individually, box D “I observe”)

• What questions do you now have?• What are you surprised about? What matches your prediction and what questions do you still have.

 (Individually, box D “My Questions”)

Chart your questions/response onto CHART PAPER BOX D.  Reach consensus & box your group’s best question.  GALLERY WALK 45

Page 46: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

ConclusionBased on your observations, data, and questions which sea stars are more closely related. Cite 3 pieces of evidence. (Write your response in box E.)

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Page 47: Using authentic data to analyze genetic variation in Antarctic sea stars. Presentation created by Gisela Wolfe Mar Vista High School 1 San Diego Science

Exit Slip

•Which questions do you think helped build your conclusion? •Concluding Questions: How might these questions relate to the idea of "how organisms change over time"

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