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Page 1: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

CC by RStudio

the Tidyverse and

ggplot2

Sungkyu Jung

excepted from slides at Rstudio.com (00-Tidyverse-webinar)

https://creativecommons.org/licenses/by/4.0/
Page 2: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

R Packages

Page 3: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

function1()function2()function3()function4()

help help help

p p p p10071007100710071009100910091009p p p

p p p

function5()function6()function7()function8()

help help help

p p p p10071007100710071009100910091009p p p

p p p

function9()functionA()functionB()functionC()

help help help

p p p p10071007100710071009100910091009p p p

p p p

functionD()functionE()functionF()functionG()

help help help

p p p p10071007100710071009100910091009p p p

p p p

Page 4: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

function1()function2()function3()function4()

help help help

p p p p10071007100710071009100910091009p p p

p p p

function5()function6()function7()function8()

help help help

p p p p10071007100710071009100910091009p p p

p p p

function9()functionA()functionB()functionC()

help help help

p p p p10071007100710071009100910091009p p p

p p p

functionD()functionE()functionF()functionG()

help help help

p p p p10071007100710071009100910091009p p p

p p p

Base R

Page 5: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

function1()function2()function3()function4()

help help help

p p p p10071007100710071009100910091009p p p

p p p

function5()function6()function7()function8()

help help help

p p p p10071007100710071009100910091009p p p

p p p

function9()functionA()functionB()functionC()

help help help

p p p p10071007100710071009100910091009p p p

p p p

functionD()functionE()functionF()functionG()

help help help

p p p p10071007100710071009100910091009p p p

p p p

Base R R Packages

Page 6: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

CC by RStudio

Using packages

install.packages("foo")

Downloads files to computer

1

1 x per computer

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Page 7: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

CC by RStudio

Using packages

install.packages("foo")

Downloads files to computer

1library("foo")

Loads package

2

1 x per computer 1 x per R Session

https://creativecommons.org/licenses/by/4.0/
Page 8: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

CC by RStudioDisplay by Adolfo A ́lvarez

The TidyverseA collection of modern R packages that share common philosophies, embed best practices, and are designed to work together.

CC by RStudio

https://creativecommons.org/licenses/by/4.0/
https://creativecommons.org/licenses/by/4.0/
Page 9: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

CC by RStudio

tidyverseAn R package that serves as a short cut for installing and loading the components of the tidyverse.

library("tidyverse")

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Page 10: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

CC by RStudio

install.packages("tidyverse")

does the equivalent ofinstall.packages("ggplot2")install.packages("dplyr")install.packages("tidyr")install.packages("readr")install.packages("purrr")install.packages("tibble")install.packages("hms")install.packages("stringr")install.packages("lubridate")install.packages("forcats")install.packages("DBI")install.packages("haven")install.packages("httr")install.packages("jsonlite")install.packages("readxl")install.packages("rvest")install.packages("xml2")install.packages("modelr")install.packages("broom")

https://creativecommons.org/licenses/by/4.0/
Page 11: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

CC by RStudio

install.packages("tidyverse")

does the equivalent ofinstall.packages("ggplot2")install.packages("dplyr")install.packages("tidyr")install.packages("readr")install.packages("purrr")install.packages("tibble")install.packages("hms")install.packages("stringr")install.packages("lubridate")install.packages("forcats")install.packages("DBI")install.packages("haven")install.packages("httr")install.packages("jsonlite")install.packages("readxl")install.packages("rvest")install.packages("xml2")install.packages("modelr")install.packages("broom")

library("tidyverse")

does the equivalent oflibrary("ggplot2")library("dplyr")library("tidyr")library("readr")library("purrr")library("tibble")

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Page 12: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

CC by RStudio

install.packages("tidyverse")

does the equivalent ofinstall.packages("ggplot2")install.packages("dplyr")install.packages("tidyr")install.packages("readr")install.packages("purrr")install.packages("tibble")install.packages("hms")install.packages("stringr")install.packages("lubridate")install.packages("forcats")install.packages("DBI")install.packages("haven")install.packages("httr")install.packages("jsonlite")install.packages("readxl")install.packages("rvest")install.packages("xml2")install.packages("modelr")install.packages("broom")

library("tidyverse")

does the equivalent oflibrary("ggplot2")library("dplyr")library("tidyr")library("readr")library("purrr")library("tibble")

Six functions • arrange() • filter() • select() • mutate() • summarise() • group_by()

Visualization tools

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Page 13: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

Grammar of Graphics

Page 14: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

CC by RStudio

mpg cyl disp hp

21.0 6 160.0 221.0 6 160.0 222.8 4 108.0 121.4 6 258.0 218.7 8 360.0 318.1 6 225.0 214.3 8 360.0 524.4 4 146.7 122.8 4 140.8 119.2 6 167.6 217.8 6 167.6 216.4 8 275.8 317.3 8 275.8 315.2 8 275.8 310.4 8 472.0 410.4 8 460.0 414.7 8 440.0 432.4 4 78.7 130.4 4 75.7 133.9 4 71.1 1

data geom

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Page 15: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

CC by RStudio

mpg cyl disp hp

21.0 6 160.0 221.0 6 160.0 222.8 4 108.0 121.4 6 258.0 218.7 8 360.0 318.1 6 225.0 214.3 8 360.0 524.4 4 146.7 122.8 4 140.8 119.2 6 167.6 217.8 6 167.6 216.4 8 275.8 317.3 8 275.8 315.2 8 275.8 310.4 8 472.0 410.4 8 460.0 414.7 8 440.0 432.4 4 78.7 130.4 4 75.7 133.9 4 71.1 1

data geom

mappingsfill

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Page 16: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

CC by RStudio

mpg cyl disp hp

21.0 6 160.0 221.0 6 160.0 222.8 4 108.0 121.4 6 258.0 218.7 8 360.0 318.1 6 225.0 214.3 8 360.0 524.4 4 146.7 122.8 4 140.8 119.2 6 167.6 217.8 6 167.6 216.4 8 275.8 317.3 8 275.8 315.2 8 275.8 310.4 8 472.0 410.4 8 460.0 414.7 8 440.0 432.4 4 78.7 130.4 4 75.7 133.9 4 71.1 1

fillshape

data geom

mappings

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Page 17: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

CC by RStudio

mpg cyl disp hp

21.0 6 160.0 221.0 6 160.0 222.8 4 108.0 121.4 6 258.0 218.7 8 360.0 318.1 6 225.0 214.3 8 360.0 524.4 4 146.7 122.8 4 140.8 119.2 6 167.6 217.8 6 167.6 216.4 8 275.8 317.3 8 275.8 315.2 8 275.8 310.4 8 472.0 410.4 8 460.0 414.7 8 440.0 432.4 4 78.7 130.4 4 75.7 133.9 4 71.1 1

shape fillx

data geom

mappings

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Page 18: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

CC by RStudio

mpg cyl disp hp

21.0 6 160.0 221.0 6 160.0 222.8 4 108.0 121.4 6 258.0 218.7 8 360.0 318.1 6 225.0 214.3 8 360.0 524.4 4 146.7 122.8 4 140.8 119.2 6 167.6 217.8 6 167.6 216.4 8 275.8 317.3 8 275.8 315.2 8 275.8 310.4 8 472.0 410.4 8 460.0 414.7 8 440.0 432.4 4 78.7 130.4 4 75.7 133.9 4 71.1 1

y xshape fill

data geom

mappings

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Page 19: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

CC by RStudio

mpg cyl disp hp

21.0 6 160.0 221.0 6 160.0 222.8 4 108.0 121.4 6 258.0 218.7 8 360.0 318.1 6 225.0 214.3 8 360.0 524.4 4 146.7 122.8 4 140.8 119.2 6 167.6 217.8 6 167.6 216.4 8 275.8 317.3 8 275.8 315.2 8 275.8 310.4 8 472.0 410.4 8 460.0 414.7 8 440.0 432.4 4 78.7 130.4 4 75.7 133.9 4 71.1 1

xshape filly

pointslines

data geom

mappings

https://creativecommons.org/licenses/by/4.0/
Page 20: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

CC by RStudio

mpg cyl disp hp

21.0 6 160.0 221.0 6 160.0 222.8 4 108.0 121.4 6 258.0 218.7 8 360.0 318.1 6 225.0 214.3 8 360.0 524.4 4 146.7 122.8 4 140.8 119.2 6 167.6 217.8 6 167.6 216.4 8 275.8 317.3 8 275.8 315.2 8 275.8 310.4 8 472.0 410.4 8 460.0 414.7 8 440.0 432.4 4 78.7 130.4 4 75.7 133.9 4 71.1 1

xy

linesbars

pointsdata geom

mappings

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Page 21: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

CC by RStudio

mpg cyl disp hp

21.0 6 160.0 221.0 6 160.0 222.8 4 108.0 121.4 6 258.0 218.7 8 360.0 318.1 6 225.0 214.3 8 360.0 524.4 4 146.7 122.8 4 140.8 119.2 6 167.6 217.8 6 167.6 216.4 8 275.8 317.3 8 275.8 315.2 8 275.8 310.4 8 472.0 410.4 8 460.0 414.7 8 440.0 432.4 4 78.7 130.4 4 75.7 133.9 4 71.1 1

mappingsy

geomdata

linesbars

points

xfill

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Page 22: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

To make a graph

CC by RStudio

ggplot(data = <DATA>) + <GEOM_FUNCTION>(mapping = aes(<MAPPINGS>))[template]

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Page 23: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

To make a graph

dataCC by RStudio

ggplot(data = <DATA>) + <GEOM_FUNCTION>(mapping = aes(<MAPPINGS>))

1. Pick a data setmpg cyl disp hp

21.0 6 160.0 221.0 6 160.0 222.8 4 108.0 121.4 6 258.0 218.7 8 360.0 318.1 6 225.0 214.3 8 360.0 524.4 4 146.7 122.8 4 140.8 119.2 6 167.6 217.8 6 167.6 216.4 8 275.8 317.3 8 275.8 315.2 8 275.8 310.4 8 472.0 410.4 8 460.0 414.7 8 440.0 432.4 4 78.7 130.4 4 75.7 133.9 4 71.1 1

https://creativecommons.org/licenses/by/4.0/
Page 24: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

To make a graph

CC by RStudio

ggplot(data = <DATA>) + <GEOM_FUNCTION>(mapping = aes(<MAPPINGS>))

1. Pick a data set

2. Choose a geom to display cases

mpg cyl disp hp

21.0 6 160.0 221.0 6 160.0 222.8 4 108.0 121.4 6 258.0 218.7 8 360.0 318.1 6 225.0 214.3 8 360.0 524.4 4 146.7 122.8 4 140.8 119.2 6 167.6 217.8 6 167.6 216.4 8 275.8 317.3 8 275.8 315.2 8 275.8 310.4 8 472.0 410.4 8 460.0 414.7 8 440.0 432.4 4 78.7 130.4 4 75.7 133.9 4 71.1 1

data geom

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Page 25: the Tidyverse and ggplot2 - Statistics€¦ · CC by RStudio the Tidyverse and ggplot2 Sungkyu Jung excepted from slides at Rstudio.com (00-Tidyverse-webinar)

To make a graphmpg cyl disp hp

21.0 6 160.0 221.0 6 160.0 222.8 4 108.0 121.4 6 258.0 218.7 8 360.0 318.1 6 225.0 214.3 8 360.0 524.4 4 146.7 122.8 4 140.8 119.2 6 167.6 217.8 6 167.6 216.4 8 275.8 317.3 8 275.8 315.2 8 275.8 310.4 8 472.0 410.4 8 460.0 414.7 8 440.0 432.4 4 78.7 130.4 4 75.7 133.9 4 71.1 1

data geom

mappingsfill

CC by RStudio

ggplot(data = <DATA>) + <GEOM_FUNCTION>(mapping = aes(<MAPPINGS>))

1. Pick a data set

2. Choose a geom to display cases

3. Map aesthetic properties to variables

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Overview - John Muschelli€¦ · library(tidyverse) ── Attaching packages ───────────────────────────────────────

Intro to Graphics with ggplot2 - GitHub Pageskmaurer.github.io/documents/ggplot2Intro.pdf · Intro to Graphics with ggplot2. ggplot2 in a nutshell I Package for statistical graphics

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The tidyverse - Meetupfiles.meetup.com/1406240/Tidyverse.pdfThe tidyverse September 2016. Tidy Import Surprises, but doesn't scale Consistent way of Create new variables & new summaries

Une introduction à Tidyverse - math-evry.cnrs.fr · 3tidyverse charge les paquets ggplot2, tibble, tidyr, readr, purrr et dplyr. Ceux-ci sont considérés comme le coredu tidyverse

ggplot2 - riptutorial.com

Ggplot2 ch2

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ggplot2 for beginners

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Assignment: ggplot2 - cnaimancnaiman.com/DataViz/Homework/ggplot2-HW.pdf · Assignment: ggplot2 ... most likely have to use the help features in RStudio and you will no doubt find

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ggplot2: Going further in the tidyverse - York Universityeuclid.psych.yorku.ca/www/psy6135/lectures/ggplot-further.pdf · religion income frequency . 1 Agnostic

Article type: Focus Article ggplot2 593 › papers › ggplot2-wires.pdf · Programming graphics As well as the underlying grammar, another special feature of ggplot2 is that it is

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Introduction to ggplot2 - The Hive Mind at UC Davisheather.cs.ucdavis.edu/~matloff/GGPlot2/GGPlot2Intro.pdf · Introduction to ggplot2 N. Matloff January 11, 2013 1 Introduction Hadley

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INTRODUCTION TO THE TIDYVERSE - Amazon S3 · DataCamp Introduction to the Tidyverse Visualizing with ggplot2 INTRODUCTION TO THE TIDYVERSE ... 5 Argentina Americas 2007 75.320 40301927

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clusteRing the woRld · share an underlying philosophy and common APIs. Install the complete tidyverse with install.packages("tidyverse") ... Source: Nurandi (DSI Bootcamp Slide)

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Enter the Tidyverse - sjspielman.orgsjspielman.org/bio5312_fall2017/slides/day2_intro_to_tidyverse.pdf · What is the “tidyverse”? ... •Document presentation with RMarkdown

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