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The effects of biochar additions on soil structure and changes to aged biochar particles in soil Burns, K. (2014). The effects of biochar additions on soil structure and changes to aged biochar particles in soil Link to publication in the UWA Research Repository Rights statement This work is protected by Copyright. You may print or download ONE copy of this document for the purpose of your own non-commercial research or study. Any other use requires permission from the copyright owner. The Copyright Act requires you to attribute any copyright works you quote or paraphrase. General rights Copyright owners retain the copyright for their material stored in the UWA Research Repository. The University grants no end-user rights beyond those which are provided by the Australian Copyright Act 1968. Users may make use of the material in the Repository providing due attribution is given and the use is in accordance with the Copyright Act 1968. Take down policy If you believe this document infringes copyright, raise a complaint by contacting [email protected]. The document will be immediately withdrawn from public access while the complaint is being investigated. Download date: 12. Jul. 2018

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Page 1: The effects of biochar additions on soil structure and …research-repository.uwa.edu.au/files/4408759/Burns...The effects of biochar additions on soil structure and changes to aged

The effects of biochar additions on soil structure and changesto aged biochar particles in soilBurns, K. (2014). The effects of biochar additions on soil structure and changes to aged biochar particles insoil

Link to publication in the UWA Research Repository

Rights statementThis work is protected by Copyright. You may print or download ONE copy of this document for the purposeof your own non-commercial research or study. Any other use requires permission from the copyright owner.The Copyright Act requires you to attribute any copyright works you quote or paraphrase.

General rightsCopyright owners retain the copyright for their material stored in the UWA Research Repository. The University grants no end-userrights beyond those which are provided by the Australian Copyright Act 1968. Users may make use of the material in the Repositoryproviding due attribution is given and the use is in accordance with the Copyright Act 1968.

Take down policyIf you believe this document infringes copyright, raise a complaint by contacting [email protected]. The document will beimmediately withdrawn from public access while the complaint is being investigated.

Download date: 12. Jul. 2018

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The effects of biochar additions on soil structure and changes to aged biochar

particles in soil

By

Kerrie J Burns

B. Eng. (Hons)

This thesis is presented for the Degree of

Master of Science

at

The University of Western Australia

School of Earth and Environment

1/1/2014

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ABSTRACT

Biochar is a soil amendment that is capable of improving the chemical, physical,

and biological properties of soils. This thesis examined the physical changes in

two contrasting soils with biochar additions to determine whether there were

measurable improvements in soil structure. Improvements were quantified by

measuring the key soil structure indicators, bulk density, soil water content, and

aggregate stability using established methods. Physical changes to individual

biochar particles and soil aggregates were also examined using scanning

electron microscopy (SEM) and energy-dispersive spectroscopy (EDS).

Established biochar trials were used in this study in order to enable

measurement of physical changes in the soil due to biochar additions that had

occurred several years before sampling. The trials were the Rainbow Bee Eater

(RBE) trial in Western Australia on a sandy earth, and the N.S.W Department of

Primary Industries trials in northern New South Wales on a red ferrosols. The

different soil types were selected to investigate whether biochar’s impact differs

in contrasting soils.

The results for the RBE poor structured sandy soil showed that additions of

60t/ha or greater of biochar produced a statistically significant increase in both

water holding and bulk density. The longer-term effects of these improvements

on plant productivity is not clear since the plant yields have not been measured

subsequent to the initial field trial shortly after the biochar was added to the soil.

There were no measureable improvements from biochar additions in

characteristics of the structured ferrosol.

In addition to measuring soil chemical and physical characteristics, scanning

electron microscope (SEM) and energy dispersive spectroscopy (EDS) were

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used to ascertain whether the biochar particles had become integrated into the

soil structure. Soil aggregates were examined as well as individual biochar

particles from the soil. The EDS analysis showed evidence of clay minerals,

anatase, and iron oxides on the exterior surface of biochar indicating the

possible formation of biochar-mineral complexes. SEM images showed

evidence of abundant fungal hyphae attached to soil aggregates containing

biochar particles, possibly creating more stable aggregates. These SEM images

indicate that the explanations given for the changes in soil structure and soil

stability are plausible.

The interior sections of biochar particles were also examined using SEM and

EDS. Several minerals, including calcite and apatite occurred inside the biochar

grains removed from soil and these minerals, which are common constituents of

biochar, have evidently been protected against dissolution in the acid soil. This

significant finding relates to both the fertiliser and liming values of biochar and

has not been reported in previous papers. Conversely, there was also evidence

that clay minerals, iron and aluminium oxides and possibly anatase, have been

eluviated from the surrounding soil and deposited within internal biochar pores.

While other authors have detected clay-size particles on the surface of biochars

taken from the soil, none have reported on the presence of these minerals

inside biochar fragments. The present findings indicate that while some regions

of the biochar grains were poorly accessible to soil water and consequently

remained unoccupied by soil fauna, fungi and plant roots, in other regions water

did penetrate into the biochar interior where it dissolved minerals, deposited

clay-size minerals and supported biological activity.

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TABLE OF CONTENTS

ABSTRACT .................................................................................................................. II

TABLE OF CONTENTS ............................................................................................... IV

LIST OF TABLES ...................................................................................................... VIII

LIST OF FIGURES ...................................................................................................... XI

ACKNOWLEDGEMENTS .......................................................................................... XV

STATEMENT OF STUDENT CONTRIBUTION ....................................................... XVII

1 INTRODUCTION ................................................................................................. 1

1.1 Overview ........................................................................................................................... 1

1.2 Objectives of this thesis .................................................................................................... 2

2 LITERATURE REVIEW ....................................................................................... 5

2.1 Biochar Production and the Pyrolysis Process ................................................................. 5

2.1.1 Feedstocks ......................................................................................................................... 5

2.1.2 Highest Treatment Temperature (HTT) .............................................................................. 7

2.1.3 Heating Rate ...................................................................................................................... 8

2.2 Physical Properties ........................................................................................................... 9

2.2.1 Carbon Forms and Carbon Recalcitrance .......................................................................... 9

2.2.2 Pore Structure .................................................................................................................. 10

2.2.3 Nutrient Content and pH ................................................................................................... 12

2.2.4 Surface Chemistry ............................................................................................................ 13

2.3 Biochar as a Soil Amendment ......................................................................................... 14

2.3.1 Carbon Sequestration ....................................................................................................... 15

2.3.2 Cation Exchange Capacity ............................................................................................... 16

2.3.3 Microbial Habitat ............................................................................................................... 17

2.3.4 Plant Available Nutrients and Liming ................................................................................ 19

2.3.5 Improved Soil Structure and Texture ................................................................................ 21

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2.3.6 Negative Impacts .............................................................................................................. 23

2.4 Review of Pot and Field Experiments ............................................................................. 25

2.5 Conclusions ..................................................................................................................... 26

3 EXPERIMENTAL MATERIALS AND METHODS ............................................... 29

3.1 Overview ......................................................................................................................... 29

3.2 Field Sites ....................................................................................................................... 30

3.2.1 Rainbow Bee Eater Biochar Trials .................................................................................... 30

3.2.2 Field Experiment Design .................................................................................................. 32

3.2.3 Soil Sampling ................................................................................................................... 35

3.2.4 Wollongbar Agricultural Institute Biochar Site ................................................................... 36

3.2.5 Maclean’s Ridges Macadamia Biochar Experiment.......................................................... 37

3.3 Bulk density ..................................................................................................................... 38

3.3.1 Rainbow Bee Eater Site Bulk Density Sampling ............................................................... 40

3.3.2 Wollongbar Agricultural Institute and Maclean’s Ridges Macadamia Sites Bulk Density

Sampling ...................................................................................................................... 41

3.4 Friability and strength ...................................................................................................... 42

3.4.1 Rainbow Bee Eater Biochar Experiment .......................................................................... 42

3.5 Soil Water Characteristic ................................................................................................ 42

3.5.1 Rainbow Bee Eater Biochar Experiment .......................................................................... 44

3.5.2 Wollongbar Agricultural Institute and Maclean’s Ridges Biochar Experiments ................. 44

3.6 Aggregate distribution, stability and resilience ................................................................ 44

3.6.1 Rainbow Bee Eater Biochar Trial...................................................................................... 46

3.6.2 Wollongbar Agricultural Institute Site ................................................................................ 47

3.7 Scanning Electron Microscopy (SEM) and Energy-Dispersive X-Ray Spectroscopy

(EDS) ............................................................................................................................ 48

4 PHYSICAL CHARACTERISTICS OF BIOCHAR TREATED SOILS - RESULTS

AND DISCUSSION ............................................................................................ 50

4.1 Bulk Density .................................................................................................................... 51

4.1.1 Theoretical Bulk Density ................................................................................................... 51

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4.1.2 Results ............................................................................................................................. 54

4.1.3 Discussion ........................................................................................................................ 59

4.2 Volumetric Soil Water Content ........................................................................................ 60

4.2.1 Theoretical Soil Water Content ......................................................................................... 60

4.2.2 Results ............................................................................................................................. 61

4.2.3 Impact of Biochar Level of Application .............................................................................. 66

4.2.4 Discussion ........................................................................................................................ 73

4.3 Aggregate Distribution, Stability and Resilience ............................................................. 74

4.3.1 Results ............................................................................................................................. 75

4.3.2 Discussion ........................................................................................................................ 79

4.3.3 Hand-held Sieve Compared to Automated Yoder Sieve ................................................... 80

4.4 Penetrometer Measurements ......................................................................................... 81

5 EVIDENCE OF MECHANISMS THAT MODIFIED SOIL CHARACTERISTICS

DUE TO BIOCHAR ADDITIONS........................................................................ 83

5.1 Bulk Density .................................................................................................................... 83

5.2 SEM Observations in Relation to Soil Water Retention .................................................. 84

5.3 Morphology and Water Stable Aggregates ..................................................................... 84

5.4 SEM Images of Soil Aggregates with Biochar ................................................................ 85

5.5 Discussion ....................................................................................................................... 88

6 SCANNING ELECTRON MICROSCOPY (SEM) AND ENERGY-DISPERSIVE

SPECTROSCOPY (EDS) OF BIOCHAR IN SOIL .............................................. 89

6.1 Morphological Characteristics of Biochar Particles and the Composition of Associated

Mineral Particles ........................................................................................................... 89

6.1.1 Biochar Pore Structure ..................................................................................................... 90

6.1.2 Unusual Structures ........................................................................................................... 90

6.1.3 Deposits on Biochar ......................................................................................................... 91

6.1.4 SEM images and EDS Data of Biochar Particles ............................................................. 94

6.2 Soil and Biochar Aggregates ........................................................................................ 104

6.2.1 Fungal Growth ................................................................................................................ 104

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6.2.2 Interaction with Soil Particles .......................................................................................... 105

6.2.3 Discussion ...................................................................................................................... 105

6.2.4 SEM images of Soil Aggregates with Biochar ................................................................ 105

6.3 Discussion ..................................................................................................................... 109

7 CONCLUSIONS .............................................................................................. 110

7.1 Summary of Results ...................................................................................................... 112

7.1.1 Bulk Density ................................................................................................................... 112

7.1.2 Volumetric Soil Water Content ....................................................................................... 112

7.1.3 Aggregate Distribution, Stability and Resilience ............................................................. 113

7.1.4 SEM and EDS Investigations ......................................................................................... 114

7.2 Future Research ........................................................................................................... 115

8 REFERENCES ................................................................................................ 116

9 APPENDIX 1 ................................................................................................... 123

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LIST OF TABLES

Table 3-1 Properties of yellow sandy earths, adapted from Moore (1998) *Nutrient deficiencies may

occur, but their severity is strongly influenced by prior land management; **(Isbell, 1996) ........................ 31

Table 3-2 Nitrogen, carbon, and sulphur concentrations and C:N values for wheat straw and

mallee biochars. Values are means for three replicate samples ± standard error of the

mean from Davies et al. (2009) * data provided by P. Burgess on behalf of Rainbow Bee

Eater Pty Ltd ....................................................................................................................... 31

Table 3-3 XRF elemental analyses of wheat straw and mallee biochar ash. Values are for %

oxide apart from Cu and Zn, which are mg/kg. Values are means of three replicate

samples ± standard error of the mean from Davies et al. (2009) ....................................... 32

Table 3-4 Soil properties (0-10 cm) for Wollongbar Agriculture Research Institute Biochar site

from Scheer et al. (2011) .................................................................................................... 37

Table 3-5 Chemical analysis of green waste biochar from Slavich et al. (2013). ....................... 37

Table 3-6 Chemical analysis of paper mill waste biochar from Martin et al. (2012) and Van

Zwieten, Kimber, Morris, Downie, et al. (2010) .................................................................. 38

Table 3-7 Biochar treatments used for measurement of water content at various matric

potentials. ........................................................................................................................... 44

Table 3-8 Biochar treatments used to measure wet aggregate stability. .................................... 47

Table 4-1 Percentage of biochar by weight and volume for each treatment at the Rainbow Bee

Eater Site. (Assumes a bulk density for the biochars of 0.3 Mgm-3 and biochar was

contained in the top 12 cm of the soil profile.) .................................................................... 51

Table 4-2 Comparison of bulk density means (Mgm-3) and variances, including the P-values

between treatments and the control at Rainbow Bee Eater trials for mallee biochar (MB)

and wheat straw biochar (WSB) *N= number of measurements **not significant ............. 55

Table 4-3 Comparison of bulk density means (Mgm-3) and variances, including the P-values

between treatments and the control at Wollongbar and Maclean’s Ridges trials. *N=

number of measurements, **not significant ....................................................................... 55

Table 4-4 Comparison of soil bulk density mean values (Mgm-3) and variances, including the

P-values for differences between mallee biochar (MB) and wheat straw biochar (WSB) for

60 and 100 t/ha treatments at the Rainbow Bee Eater site ............................................... 59

Table 4-5 Means and variances of volumetric water content (m3of H2O/ m3 soil) for mallee

biochar (MB) and wheat straw biochar (WSB) treatments at 0, 10, 10 and 1500 kPa matric

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potentials and P-values between treatments and control. * N is the number of

measurements, ** n.s = not significant ............................................................................... 64

Table 4-6 Means and variances of volumetric soil water content (m3of H2O/ m3 soil) for

Wollongbar and Maclean’s Ridges biochar treatments at 0, 10, 100 and 1500 kPa matric

potentials and P-values between treatments and control. * N is the number of

measurements, ** n.s = not significant ............................................................................... 65

Table 4-7 A comparison of measured means and theoretical volumetric water contents (m3of

H2O/ m3 soil) at field capacity. MB =mallee biochar, WSB = wheat straw biochar ............. 66

Table 4-8 A comparison of mean measured and theoretical volumetric water contents (m3of

H2O/ m3 soil) at field capacity, with percentage differences from the calculated mean for

Wollongbar (10t/ha) and Maclean’s Ridges (60 t/ha). ........................................................ 66

Table 4-9 A comparison of water capacity (AWC) at different suctions, with percentage of total

AWC in brackets for Rainbow Bee Eater (RBE) soil with mallee biochar (MB) and wheat

straw biochar (WSB). * significantly different from the control (P<0.05) ............................ 68

Table 4-10 A comparison of available water capacities (AWC) at different suctions, with

percentage of field capacity given in brackets for Wollongbar, Maclean’s Ridges and

Rainbow Bee Eater (RBE) soils with mallee biochar (MB). * significantly different from the

control (P<0.05) .................................................................................................................. 70

Table 4-11 Means and variances of volumetric water content (m3of H2O/ m3 soil) for mallee

biochars (MB) and wheat straw biochars (WSB) at 0, 10, 10 and 1500 kPa matric

potentials and P-values between treatments at 60 t/ha and 100 t/ha. * N is the number of

measurements, ** n.s = not significant ............................................................................... 72

Table 4-12 Comparisons of water stable aggregates (WSA) (%) means and variances, including

P-values between the controls for Wollongbar and Maclean’s Ridges treatments. *N is the

number of measurements **n.s = not significant ............................................................... 77

Table 4-13 Comparisons of water stable aggregates WSA % values (means and variances),

including P-values between the control for RBE and treatments for 10, 20, 60 and 100t/ha

mallee biochar (MB) treatments and 60 and 100 t/ha wheat straw biochar (WSB)

treatments. *N is the number of measurements **n.s = not significant .............................. 78

Table 4-14 Comparisons of water stable aggregates (%) means and variances, including P-

values between the RBE treatments for wheat straw biochar (WSB) and mallee biochar at

60t/ha and 100t/ha. *N is the number of measurements **n.s = not significant................. 79

Table 4-15 Comparisons of water stable aggregates (%) means and variances, including P-

values measured using the hand-held sieve and automated Yoder sieve. *N is the number

of measurements **n.s = not significant ............................................................................. 80

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Table 4-16 Comparison of penetrometers resistance means and variances, including the P-

values between treatments and the control at Rainbow Bee Eater Biochar SEM ............. 82

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LIST OF FIGURES

Figure 2-1 Theoretical structure development of biochar with increasing pyrolysis temperatures

(Downie et al., 2009). ............................................................................................................8

Figure 2-2 SEM micrographs of biochars created from diverse plant materials showing

macropores derived from the original plant cell structure (Keech et al., 2005). ................. 11

Figure 2-3 SEM shows a pine biochar sample produced at a high heating rate that has

undergone plastic transformation to increase macropores (Cetin et al., 2004). ................ 12

Figure 3-1 Impact of application of mallee and wheat biochar at rates of 10 and 60 t/ha on soil

pH at 5, 15 and 25 cm soil depth, compared to controls with and without cultivation at the

Rainbow Bee Eater site, Kalannie, 2008 from Davies et al. (2009). .................................. 33

Figure 3-2 Impact of mallee and wheat straw biochar additions (at full fertiliser rate) on soil

organic carbon (A) and total soil carbon (B) at Rainbow Bee Eater site, Kalannie, 2008

(Davies et al., 2009). .......................................................................................................... 34

Figure 3-3 Photographs of the sampling tube, with sharpened cutting edge used to measure

bulk density. ........................................................................................................................ 39

Figure 3-4 Photo of the core guide used for taking undisturbed soil samples. .......................... 40

Figure 3-5 Manually operated aggregate stability device following design of Seybold and

Herrick (2001) used in the current study. ........................................................................... 46

Figure 4-1 Photographs of air-dried soil samples from the Rainbow Bee Eater site. a. mallee

biochar (100t/ha), b. wheat straw biochar (100t/ha) and c. the control (scale in cm). ....... 53

Figure 4-2 Measured bulk densities of soil for the Wollongbar, Maclean’s Ridges and Rainbow

Bee Eater (RBE) sites for additions of mallee biochar (MB) and wheat straw biochar

(WSB). ................................................................................................................................ 57

Figure 4-3 Comparison of Moisture Retention Characteristics for 0, 60, 100 t/ha of wheat straw

(WSB) and mallee (MB) biochar at 0, 10, 100 and 1500 kPa matric potentials. ................ 62

Figure 4-4 Mean available water capacity (AWC) for the Rainbow Bee Eater (RBE) treatments

with mallee biochar (MB) and wheat straw biochar (WSB). Error bars show standard

deviation and all treatments have a p-value less than 0.02 when compared to the control

(C). ...................................................................................................................................... 68

Figure 4-5 Comparison of Moisture Retention Characteristics for soils with and without biochar

for Wollongbar (control, 10t/ha biochar), Maclean’s Ridges (control, 60t/ha biochar) and

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Rainbow Bee Eater (control, 100t/ha biochar) soils at 0, 10, 100 and 1500 kPa matric

potentials. RBE – Rainbow Bee Eater trials **MB – mallee biochar ................................. 70

Figure 4-6 Percentage of water stable aggregates for the RBE control and treatments for 10, 20,

60 and 100t/ha mallee biochar (MB) treatments and 60 and 100 t/ha wheat straw biochar

(WSB) treatments and their means. ................................................................................... 76

Figure 4-7 Comparison of the percentage of water stable aggregates between the Wollongbar

and Maclean’s Ridges s and RBE biochar experiments (mallee and wheat straw biochar).

............................................................................................................................................ 77

Figure 4-8 Penetrometer resistance for 0, 60 and 100 t/ha mallee and wheat straw biochar

treatments at Rainbow Bee Eater biochar site ................................................................... 81

Figure 5-1 Top image: soil aggregate from the mallee biochar 100 t/ha treatment (backscatter

electron image). Bottom image: an enlargement of the biochar particle outlined in the red

box showing many fungal hyphae. ..................................................................................... 86

Figure 5-2 Top images: soil aggregate from 60t/ha mallee biochar Bottom images: enlargement

of the biochar particle in the aggregate outlined in the red box. Secondary electron images

(left). ................................................................................................................................... 87

Figure 5-3 Soil aggregate from mallee biochar 60 t/ha treatment (secondary electron image)

abundant hyphae. ............................................................................................................... 88

Figure 6-1 External surface mallee biochar from soil with EDS analysis (back scatter electron

image- top, secondary electron image- bottom) sp1 ,sp2 sp3 and sp4 indicate the

presence of kaolin and iron oxide together with residual calcium carbonate. .................... 95

Figure 6-2 Internal and external deposits of kaolin and iron oxide on mallee biochar (back

scatter electron image) from soil with EDS analyses indicate various amounts of illuviated

clay and iron oxide together with residual calcium carbonate and other salts. .................. 96

Figure 6-3 Exterior surface mallee biochar (back scatter electron image) from soil with EDS

analysis sp1- kaolin, calcite. ............................................................................................... 97

Figure 6-4 Mallee biochar exterior surface (back scatter electron image) with soil particles

attached to its surface; EDS analyses sp1-kaolin, iron oxide, several S, K, Ca salts; sp2 –

clay, potassium salt; sp3,4- mostly kaolin, iron oxide. ....................................................... 97

Figure 6-5 External surface of wheat straw biochar (back scatter electron image) from soil with

EDS analyses sp1 – aluminium oxide[gibbsite], sp2 – potassium, phosphorus and other

elements indicating a mixture of minerals. ......................................................................... 98

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Figure 6-6 Internal surface of mallee biochar (back scatter electron image) from soil with EDS

analyses sp1, 2, 4 –mostly illuviated kaolin and iron oxide; sp 3, 5 – apatite, Mg, Ca, S

salts; ................................................................................................................................... 98

Figure 6-7 Internal surface of wheat straw biochar particle with EDS analysis (backscatter

electron image). Particles giving sp1 and sp2 are mostly composed of approximately equal

amounts of Al and Si and may be mostly kaolin that has been illuviated into the biochar

grain. ................................................................................................................................... 99

Figure 6-8 Internal wheat straw biochar (backscatter electron image) with EDS analysis-

particles generating sp1 and sp2 are Fe and Cu/Zn rich, possibly reflecting contaminants.

............................................................................................................................................ 99

Figure 6-9 Internal wheat straw biochar (backscatter electron image) from soil with EDS

analyses. Sp1- Ca, Mg carbonates, sulphates, sylvite; Sp2- kaolin, anatase, sylvite,

gypsum and possible Cu/Zn (brass) contamination. ........................................................ 100

Figure 6-10 Internal surface of mallee biochar (back scatter electron image) from soil with EDS

analysis sp1 –apatite; sp2-calcite..................................................................................... 100

Figure 6-11 Internal surface of mallee biochar (backscatter electron image) from soil with EDS

analysis. Sp1 –apatite; sp2-calcite. .................................................................................. 101

Figure 6-12 Enlargement from above image of apatite particle producing sp1. ....................... 101

Figure 6-13 Internal surface mallee biochar (backscatter electron image) from soil with EDS

analysis. Sp1 - kaolin crystals deposited from soil solution or suspension on pore walls.

.......................................................................................................................................... 102

Figure 6-14 Internal surface of mallee biochar (backscatter electron image) from soil with EDS

analyses. sp1 - calcite; sp2 – illuviated kaolin and iron oxide. ......................................... 102

Figure 6-15 Internal surface of mallee biochar (backscatter electron image) from soil with EDS

analyses sp1 – kaolin, apatite; sp2 – Mg, Ca phosphates and carbonates; sp3, sp4 - as for

sp2 plus kaolin. ................................................................................................................. 103

Figure 6-16 Enlargement of sp1 above Figure 6-17 Enlargement of sp3 and sp4.

above. ............................................................................................................................... 103

Figure 6-18 Internal surface of mallee biochar (backscatter electron image) from soil with EDS

analysis. sp1 –apatite. ...................................................................................................... 104

Figure 6-19 Top image: soil aggregate from the mallee biochar 100 t/ha treatment (backscatter

electron image). Bottom image: an enlargement of the biochar particle outlined in the red

box showing many fungal hyphae .................................................................................... 106

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Figure 6-20 Top images: soil aggregate from 60t/ha mallee biochar Bottom images:

enlargement of the biochar particle in the aggregate outlined in the red box. Secondary

electron images (left) ........................................................................................................ 107

Figure 6-21 Soil aggregate from mallee biochar 60 t/ha treatment (secondary electron image)

abundant hyphae .............................................................................................................. 108

Figure 6-22 Mallee biochar in a soil aggregate (secondary electron image) many fungal hyphae

are present ....................................................................................................................... 108

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ACKNOWLEDGEMENTS

I would like to thank my supervisors Dr Joe Herbertson and Prof Robert Gilkes

for all their support. Thank you Joe for your belief in me and support through the

numerous hurdles. Thank you Bob for your invaluable academic advice, and the

editing of this thesis.

I would like to acknowledge Rainbow Bee Eater Pty Ltd for permitting me to

conduct fieldwork on their trials. In particular, I would like to thank Ian and

Robyn Stanley for their awesome hospitality on my trips out to Kalannie, W.A. I

would also like to thank Syd Shea and Peter Burgess for allowing me access to

their biochar and field trial data. I would also like to acknowledge the NSW

Department of Primary Industries, especially Lukas van Zwieten, for allowing

me to conduct fieldwork on their biochar trials in northern NSW.

I greatly appreciate the technical support provided by Evonne Walker at the

School of Earth and Environment, UWA. I would have been lost without your

help and knowledge through the water characteristic testing. I would also like to

thank David Phelan from Central Scientific Services at Newcastle University for

his assistance with the SEM and EDS work.

I would like to acknowledge the financial assistance I had from CTW Feilman

Top-Up Scholarship, Australian Postgraduate Award, Future Farm Industries

CRC and The Crucible Group. Without this assistance, this project would not

have been possible.

I am grateful for the support and fun memories from all my colleagues at The

Crucible Group including Annelie Moberg, Patrice Newell, Fred De Sylva, and

Jed Browne. I would especially like to thank Fred for his assistance with making

the soil sampling tubes.

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Thank you to my parents for their support and belief in me. Finally, I would like

to say a massive thank you to my wonderful husband Mark, for his never-ending

support, patience, and belief that I could finish this thesis. Thank you to my two

older sons Jeremy and Lachlan for your patience and my little treasure Tom,

who was born during this journey.

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STATEMENT OF STUDENT CONTRIBUTION

Except where reference is made in the text of the thesis, this thesis contains no

material published elsewhere or extracted in whole or in part from a thesis by

which I have qualified for or been awarded another degree or diploma.

No other person’s work has been used without due acknowledgment in the

main text of the thesis.

This thesis has not been submitted for the award of any degree or diploma in

any other tertiary institution.

Signed

Kerrie Burns

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1 INTRODUCTION

1.1 Overview

Biochar is a carbon-based product that is produced by heating biomass, such

as manure, wood, or leaves, in a closed system with little or no oxygen

(Lehmann & Joseph, 2009). Biochar is essentially charcoal that is

manufactured for the express purpose of using it as a soil amendment

(Lehmann, 2007; Lehmann & Joseph, 2009).

The first evidence of biochar being used as a soil amendment is for Amazonian

Terra Preta soils, which are thought to date from between 450 BC and AD 950

(Barrow, 2012; Glaser et al., 2001; Lehmann et al., 2009). There is also

historical evidence of biochar being used as a soil amendment in several

European, African and South American countries as well as Japan (Barrow,

2012). Despite this long history, widespread scientific research into the effects

of biochar on soil fertility has only commenced in the past decade (Lehmann &

Joseph, 2009).

The physical and chemical properties of biochar affect its potential value as a

soil amendment. The pore structure, surface chemistry, mineral content, and

recalcitrance of the biochar are primary factors affecting its utility. These

qualities of biochars vary with different organic feedstocks and the different

conditions of the pyrolysis process such as maximum temperature and heating

rate.(Chan & Xu, 2009; Downie et al., 2009; Shackley & Sohi, 2011).

A review of the literature describing field and pot experiments shows a large

variation in plant productivity responses to biochar additions. Field experiments

have been performed with biochar representing a wide range of biochar

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feedstocks and pyrolysis conditions, as well as diverse crops and soil types. In

a broad meta analysis of 177 experiments, Jeffery et al. (2011) identified

biochar’s liming effect and influence on the soil’s water holding capacity as two

main mechanisms for improved plant productivity on acidic to neutral soils and

coarse or medium textured soils.

Another meta analysis by Biederman and Harpole (2013) was less certain of the

mechanisms and identified several possible reasons for any improvements in

plant productivity. These include improved water holding capacity, nutrient

additions, the cycling of phosphorous and potassium, and darker soil colour,

which could facilitate germination and enable a longer growing season.

1.2 Objectives of this thesis

Improved plant fertility from biochar amendments is a result of the specific

improvements in the soil (increased water holding, increased bulk density,

change in pH, and availability of nutrients) and the characteristics of the biochar

that may support these (porosity, density, alkalinity, mineral content).

This thesis examines both the soil parameters and biochar characteristics from

previously established field trials. It looks for measurable changes in soil

characteristics that are directly attributable to biochar additions.

The main goals of this research are to understand how biochar affects soils with

different qualities and to ascertain any further insights into the mechanisms

involved in causing observable improvements. More specifically, the literature

review in chapter two revealed that there was only limited and often

contradictory research on biochar’s impact on soil structure (Busscher et al.,

2010; Laird et al., 2010; Novak, Busscher, et al., 2009; Novak, Lima, et al.,

2009; Watts et al., 2005). Studies have shown biochar additions to soil can:

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Change the water holding capacity of soils (Busscher et al., 2010; Laird et al., 2009; Liang et al., 2006; Novak, Lima, et al., 2009; Tryon, 1948).

Decrease soil penetration resistance (Busscher et al., 2010). Decrease bulk density (Laird et al., 2009).

While Watts (2005) found charcoal additions had no impact on aggregation of a

clay soil , the incubation was only over a 30 day period which is probably

insufficient time for the development of an equilibrium configuration of soil

materials. In fact, all but one of published studies (Laird et al., 2009), were for

reaction periods shorter than 70 days. All the studies apart from that of Tryon,

(1948), only used one soil type. Tryon (1948) used three soil types, namely,

sand, loam, and clay and found that each soil type responded differently to

charcoal additions in respect of water holding capacity.

The above research indicates that biochar can influence at least some

measures of soil structure for several soil types. However, there were no

published research studies identifying biochar’s influence on the structure of

different soil types (apart from water holding capacity). Many of the published

studies are short term and all were conducted as pot experiments so that the

effects of biochar addition to soil in the field remain unknown.

Based on the available evidence, it is hypothesised that biochar will significantly

improve structure in a poorly structured soil in the field and become

incorporated into the soil structure over a period of years. It is expected the

changes in an already well-structured soil will be minimal. Changes in soil

structure will be quantified by measuring the key soil structure indicators, bulk

density, soil water content, and aggregate stability using established methods.

Scanning electron microscopy (SEM) and energy dispersive spectroscopy

(EDS) will be used to ascertain whether the biochar particles have become

integrated into the soil structure, by examining soil aggregates as well as

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individual biochar particles from the soil. The aggregates will also be examined

for evidence of fungal hyphae attached to biochar and binding soil particles

together. SEM and EDS will also be used to investigate the internal and

external mineral grains in biochar and results may indicate whether water,

plants, and microbes are able to access the internal spaces of biochar particles.

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2 LITERATURE REVIEW

This chapter reviews the current status of understanding of biochar as a soil

amendment and any significant gaps in knowledge. An overview of biochar

production and the pyrolysis process is followed by a review of biochar’s main

physical and chemical characteristics. The biochar characteristics anticipated to

affect its efficacy as a soil amendment are explored in detail. The final section

reviews the practical experiences with biochar as a soil amendment.

2.1 Biochar Production and the Pyrolysis Process

Pyrolysis is the heating of an organic substance with either a small amount of

oxygen or in the absence of oxygen, resulting in chemical changes in the

original substance (Mulligan et al., 2009). The typical products from pyrolysing

biomass include gas, oil and a stable carbon residue known as biochar. The

characteristics of the resultant biochar are a function of the original organic

feedstock used and the pyrolysis conditions under which it was produced.

The pyrolysis products, including biochar characteristics, will vary depending on

the specific decomposition pathways in their formation. These are influenced by

the feedstock, the highest treatment temperature, and the heating rate.

2.1.1 Feedstocks

Feedstocks that have been used in commercial and research pyrolysis plants

include wood chips, wood pellets, tree bark, crop residues (including straw, nut

shells and rice hulls), switch grass, bagasse from the sugarcane industry,

organic wastes from distillers grain, olive waste, chicken litter, dairy manure,

sewage sludge, and paper sludge (Lehmann et al., 2006; Sohi et al., 2009).

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The pore structure (derived partly from the plant cell wall structures) and the

mineral content of the feedstock affect the properties of the resultant biochar.

The pore structure of biochar is derived from both the original cell structure of

the biomass (Day et al., 2005) and micropores formed as internal gases escape

from the biomass during the pyrolysis process (Day et al., 2005). Woody

biomass such as wood chips and crop residues can result in a biochar where

the cellular structure of the feedstock is clearly visible. More processed

feedstocks such as manures and sludge contain degraded plant material but

still retain some pore structure from the base organic product. In each instance,

additional very small pores develop as the residual carbon adopts new

structures.

During pyrolysis, most of the elements in the feedstock are concentrated into

crystalline components with the exception of carbon and silica that mostly

occurs as an amorphous compound. The mineral components are present as

discrete particles in pores and on the interior and exterior surfaces of the

biochar.

High nutrient element containing feedstocks, such as chicken litter and dairy

manure, result in a higher content of crystalline compounds in biochar and

consequently higher ash content, as most nutrient elements (and impurities) are

generally not volatilised during biochar manufacture, although most nitrogen

and some sulphur tend to be lost. Woody feedstocks generally contain smaller

amounts of nutrient elements (Amonette & Joseph, 2009; Dai et al., 2013).

Different ash contents are reflected in the nutrient and pH levels of the biochar.

The influence of different feedstocks on the properties of the resultant biochar

will be discussed in more detail in section 1.2.

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2.1.2 Highest Treatment Temperature (HTT)

Highest treatment temperature (HTT) refers to the maximum temperature

reached during pyrolysis and is an important parameter in determining the

physical properties of the resultant biochar (Downie et al., 2009).

Thermal decomposition begins at temperatures above 120 ºC when organic

materials begin to lose chemically bound moisture (Mulligan et al., 2009). As

the pyrolysis temperature is increased the feedstock begins to breakdown,

beginning with hemicelluloses (200 ºC) followed by cellulose (260 ºC) then the

lignin (500 ºC), forming the pyrolysis products of biochar, gas and liquid

(Downie et al., 2009).

From around a HTT of 500 ºC, the original carbon structure of cellulose,

hemicellulose, or lignin alters to aromatic carbon compounds that become more

ordered as the temperature increases. By 800 ºC, the aromatic carbon layers

become turbostratically arranged (Figure 2-1). Carbon nuclear magnetic

resonance spectroscopy (13C-NMR) confirms that concentrations of the less

stable alkyl compounds decrease, while more stable aryl structures increase

(Krull et al., 2009) as thermal depolymerisation and condensation reactions

progress.

The amount of biochar produced reduces as the volatile components are

released from the feedstock material as temperatures increase from 350 to

700ºC (Cantrell et al., 2012).

At extreme temperatures crystallites become larger and more ordered until

graphite is formed, generally between 2000 and 3500 ºC (Chan et al., 2007;

Downie et al., 2009).

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The choice between high, moderate and low HTT will depend on the

proportions of gas, oil, and biochar desired as pyrolysis products. Increasing the

HTT reduces the biochar yield and the oxygen and hydrogen concentrations

however; the recalcitrance of the biochar is improved. Higher HTT has also

been shown to result in increases in the pH, the concentration of ash, carbon,

phosphorous and potassium, total base cation concentrations as well as the

total pore volume (Cantrell et al., 2012; Dai et al., 2013; Downie et al., 2009) .

eca

Figure 2-1 Theoretical structure development of biochar with increasing pyrolysis temperatures (Downie et al., 2009).

2.1.3 Heating Rate

Pyrolysis heating rates can be classified as flash/gasification (200-1000Cs-1),

fast (10-200Cs-1) and conventional/slow (0.1-10Cs-1), with the faster heating

rates resulting in shorter residence times in the reactor (Babu, 2008). Flash

pyrolysis, also referred to as gasification, produces a high percentage of gas

(up to 85%), whereas fast pyrolysis generally produces the most liquid (75%).

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Slow pyrolysis produces approximately equal amounts of liquid, biochar and

gas (Babu, 2008; Brown, 2009).

Slow pyrolysis heating rates (0.1-10Cs-1) have been shown to give the highest

biochar yields, particularly at low HTT (400ºC), whereas higher heating rates

tend to result in more fixed carbon and less volatile matter (Angin, 2013;

Crombie et al., 2013). The impact of the heating rate on biochar yield declines

as HTT increases (Angin, 2013).

2.2 Physical Properties

This section reviews the literature on those physical properties of biochar that

will affect how it performs as a soil amendment.

2.2.1 Carbon Forms and Carbon Recalcitrance

Biochar is a heterogeneous substance, containing volatile carbon components

that will mineralise rapidly in soil (days to years) as well as more recalcitrant

components that can last for centuries (Barrow, 2012; Sohi et al., 2009).

Transmission electron microscopy (TEM) shows the structure of biochar

consists of an organised phase of graphite-like microcrystallites and a non-

crystalline or amorphous phase (Cohen-Ofri et al., 2006). Variation in the

relative amounts of each phase change biochar properties.

The degree of carbon recalcitrance of biochar is a combination of its carbon

forms and mineral content of feedstocks. The properties of the carbon

constituents include the degree of aromaticity, the degree of regularity of

occurrence of structural units, and the inherent chemical structure of the

carbon-containing molecule, which is dependent on intra- and inter- structural

bond strengths (Krull et al., 2003). Biochars produced at high heating

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temperatures and via slow pyrolysis have a greater degree of aromatisation and

structural order (Dall'Ora et al., 2008; Downie et al., 2009) and improved

recalcitrance develops with higher pyrolysis temperature (Baldock & Smernik,

2002). Biochar produced by fast pyrolysis has a greater degree of disorder and

is more reactive than biochar produced by slow pyrolysis (Dall'Ora et al., 2008).

Biochar produced from high mineral feedstocks such as chicken litter, maize,

rye grass, etc, tends to be powdery and high in minerals, which makes them

more vulnerable to microbial degradation (Chan & Xu, 2009; Sohi et al., 2009).

Low mineral content feedstocks tend to produce more ordered graphene

structures during pyrolysis with less defects (Chan & Xu, 2009), which suggests

that they may have greater stability.

2.2.2 Pore Structure

Biochar has many pores varying greatly in size and shape. Downie et al (2009)

divided the pore sizes of biochar into three classes: (i) micropores, which are

less than 2 nm in diameter; (ii) mesopores, which have an internal diameter

between 2 nm and 50 nm; and (iii) macropores that have a diameter greater

than 50 nm. The micropore range in biochar makes the biggest contribution to

specific surface area, while the macropores generally contribute the majority of

pore volume (Downie et al., 2009).

The exact pore structure of the biochar will depend primarily on the feedstock

and the HTT of the pyrolysis process (Dai et al., 2013). Micropores are formed

by internal gases escaping from the biomass during the pyrolysis process (Day

et al., 2005), while the macropores are derived from the original cell structure of

the biomass (Figure 2-3) (Day et al., 2005). Higher pyrolysis temperatures have

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been shown to increase the overall pore volume and the amount of micropores

and mesopores in biochars from several different feedstocks (Dai et al., 2013).

Figure 2-2 SEM micrographs of biochars created from diverse plant materials showing macropores derived from the original plant cell structure (Keech et al., 2005).

High temperatures combined with high heating rates and long residence times

can result in destruction of internal walls and the development of macropores

(Figure 2-3). This leads to larger pore volume but smaller values of surface

area (Downie et al., 2009).

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Figure 2-3 SEM shows a pine biochar sample produced at a high heating rate that has undergone plastic transformation to increase macropores (Cetin et al., 2004).

2.2.3 Nutrient Content and pH

The amounts of nutrient elements in biochar varies with feedstock and pyrolysis

temperature (Chan & Xu, 2009). The soluble nutrients contained in biochar are

a contribution to soil fertility.

Up to 50% of nitrogen is vaporised from the biochar and ends up in the gas or

liquid phase when temperatures exceed 500 ºC. It has been suggested, using

limited data, that the remaining nitrogen may not be available as it becomes

bound in the carbon structure making it unavailable for plant uptake (Chan &

Xu, 2009; Hossain et al., 2011).

In a review of literature on biochar nutrients Chan and Xu (2009) found that

biochars produced from wastes of animal origin, such as chicken litter and

sewage sludge had higher phosphorus and nitrogen concentrations compared

to biochar from woody biomass. Biochar produced from soybean cake

contained the highest level of nitrogen in the data set, while woody biomass

contained the lowest nutrient concentrations. Biomass with high nutrient

element content may produce biochars with high mineral concentrations and

high pH (Glaser et al., 2002).

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Under slow pyrolysis conditions, increasing the HTT increases the ash content

and the concentration of elements , such as phosphorous, potassium and base

cations along with an increase in the pH of the biochar (Cantrell et al., 2012; Dai

et al., 2013; Hossain et al., 2011). Increasing the pyrolysis temperature also

increases the concentration of relatively non-volatile heavy metals, since these

are conserved in the biochar (Cantrell et al., 2012).

2.2.4 Surface Chemistry

The surface chemistry of biochar is complex, with hydrophobic, hydrophilic, acid

and basic sites potentially existing within nanometres of each other (Amonette &

Joseph, 2009). The surface chemistry of biochar will depend on the feedstock,

pyrolysis conditions and the reactions with the soil into which it is placed

(Amonette & Joseph, 2009). Some functional groups may be amphoteric and

be negatively charged under alkaline conditions and positively charged under

acidic conditions (Amonette & Joseph, 2009).

During the pyrolysis process, acidic functional groups such as carboxyl are

reportedly created during thermolysis of cellulose and lignin (Asada et al., 2002;

Cheng et al., 2008; Lehmann, 2007). There are mixed results in published

literature as to whether increases in HTT causes acid functional groups to

increase (Lehmann, 2007), decrease (Gaskin et al., 2008) or have an initial

increase followed by a decline. For example Nishimiya et al (1998) showed an

increase in acidic functional groups up to 600º C then a continual decrease

with increasing temperature, when pyrolysing a Japanese conifer wood

(Cryptomeria japonica). Others, such as Gundale and DeLuca (2006) did not

find a consistent relationship between acidic functional groups and pyrolysis

temperature for two different types of conifers.

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There are also contradictory results in relation to the concentration of

hydrophobic sites on biochar’s surface. Several studies found that high

temperature biochar is more hydrophobic due to a loss of surface functional

groups (Chen et al., 2008; Chun et al., 2004). Conversely other studies (2007;

Day et al., 2005) found biochar produced at 400 ºC to be more hydrophobic

than biochar produced at higher temperatures.

Biomass feedstock composition can also influence surface chemistry. For

example cations (Ca2+, K+ and Mg2+) contained within feedstocks volatilize at

much higher temperatures than C, N, and S resulting in an increase in

concentration of these ions in high temperature chars (Gundale & DeLuca,

2006). A higher concentration of cations in biochar increases the hydrophilic

character of the biochar and in turn decreases biochar’s sorption capacity for

hydrophobic compounds (Bornemann et al., 2007).

Two possible explanations for the conflicting results have been considered.

Firstly, the different biomass sources used in these studies could give rise to

differences in surface chemistry since biochar derived from biomass with high

mineral content has been shown to contain acidic sites derived from oxides of

silica, iron and aluminium (Bagreev et al., 2001). Secondly, the studies were

not completed over the same temperature range and several studies only

examined surface chemistry for two or three pyrolysis temperatures, which may

result in values for intermediate temperatures not being measured.

2.3 Biochar as a Soil Amendment

For biochar applied to soil, the desired attributes are those that support soil

fertility and provide greenhouse benefits. From the literature, the most important

characteristics for fertility and carbon recalcitrance are carbon stability, cation

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exchange capacity, microbial habitat, nutrient release and liming, and soil

structure. The following section reviews the influence of these characteristics on

soil fertility and climate change mitigation.

2.3.1 Carbon Stability

Carbon in biochar is typically in a more stable form than in the original feedstock

due to the thermal depolymerisation and condensation reactions that occur

during the pyrolysis process, which create more stable aryl structures (Krull et

al., 2009). Some estimates have indicated that as a result of this increased

stability biochar has a mean residence time in soils of between 1000 and

10,000 years with a common estimate of around 5,000 years (Swift, 2001;

Warnock et al., 2007).

The potential for biochar to mitigate climate change through carbon

sequestration has been strongly debated in the media (Monbiot, 2009a, 2009b).

The currently available global forestry and agricultural waste that is both

suitable and accessible would enable 0.162 Pg per year of biochar to be

manufactured annually (Lehmann et al., 2006), which corresponds to

approximately 2% of current global fossil fuel emissions (IPCC, 2007).

Additionally, changing current slash-and-burn practices to slash-and-char

practices could sequester another 0.21 Pg per annum, globally. Note that

additional abatement will occur if the non-biochar (gas and liquid) are used to

create renewable fuels.

Once applied to soil, biochar’s recalcitrance has been shown to decrease as a

result of biotic (Cheng et al., 2006; Hamer et al., 2004; Hockaday et al., 2007;

Shneour, 1966; Wengel et al., 2006) and abiotic (Bruun et al., 2008; Cheng et

al., 2006; Shindo, 1991) soil factors.

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Soil may protect biochar from oxidation in the long-term via physio-chemical

stabilisation. This involves associations between the organic materials and the

soil minerals creating aggregates, which encapsulate and/or shield biochar from

microbial and enzymatic attack (Czimczik & Masiello, 2007; Krull et al., 2003;

Liang et al., 2008). This increased stability implies that modification of biochar’s

surface chemistry within the soil, may also affect its long-term recalcitrance.

2.3.2 Cation Exchange Capacity

Cation exchange capacity (CEC) is a measure of a soil’s ability to retain cations

and exchange them with the soil solution, making them available for plant

uptake. Soils with high CEC have lower levels of nutrient cation leaching, and

therefore a reduction in fertilizer costs and an increase in biomass production

might be expected (Lehmann et al., 2003). Anions such as phosphorus can

also become more available due to increased pH and increasing anion solubility

(DeLuca et al., 2009).

There is a significant amount of literature indicating that biochar is able to

increase the CEC of soils (Cheng et al., 2008; Lehmann et al., 2003; Liang et

al., 2006) through its large surface area, negative surface charge, large surface

charge density and by increasing soil pH and associated negative charge

(Joseph et al., 2009; Lehmann, 2007). Not all field experiments have shown

increases in CEC after biochar additions, with one study indicating lime was

better than biochar in improving the soil’s CEC (Slavich et al., 2013).

The CEC of biochar is a function of its surface chemistry and pore structure.

The relationship between CEC and the surface chemistry of biochar is directly

related to the concentration of negative surface charge on biochar’s surface,

such as acid functional groups (Joseph et al., 2009; Lehmann, 2007). A

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biochar’s CEC also depends on its pore structure since this provides the large

surface area for cation exchange to occur, hence, the larger the surface area,

the larger the CEC.

The soil environment may act to increase biochar CEC due to the oxidation of

the biochar’s surface, forming functional acidic groups, such as carboxyl (Cheng

et al., 2006; Liang et al., 2008; Nguyen et al., 2008). Evidence of longevity of

biochar’s CEC exists in Anthrosols from the Brazilian Amazon that have

preserved biochar additions dating back from 600 to 8700 years BP. These

soils have higher CEC than adjacent natural soils and experimental work

indicated the higher CEC was a function of both a high surface area of biochar

particles and a high charge density on biochar surfaces (Liang et al., 2006).

These fertile black soils also contain much organic matter that provides

additional CEC. Experimental results indicate that the CEC of biochar develops

faster in warmer climates (Cheng et al., 2008; Cheng et al., 2006).

2.3.3 Microbial Habitat

Soil microbes provide many positive and negative services to soil health

including: cycling and immobilising inorganic nutrients; profile mixing; improved

aggregate stability; soil porosity; water infiltration; decomposing organic matter;

together with both suppressing and causing plant diseases; filtering of water

and bioremediation of contaminated soils (Brady & Weil, 2008; Thies & Rillig,

2009). Soil microbes are also thought to be responsible for decreases in

nitrous oxide and methane emissions from soils with biochar applications

compared to controls (Van Zwieten et al., 2009). Given that respectively

nitrous oxide and methane have 298 and 25 times the global warming potential

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of carbon dioxide, even small reductions in emissions could be significant for

greenhouse gas reduction (Forster et al., 2007).

The mechanisms whereby biochar affects the abundance, activity and diversity

of microorganisms in soil are currently not well understood (Thies & Rillig,

2009). However available literature points to pore structure and surface

chemistry as being the most important biochar properties for creating microbial

habitat (Pietikainen et al., 2000; Thies & Rillig, 2009; Warnock et al., 2007;

Zackrisson et al., 1996). Pore structure is important because the pores of the

biochar need to be large enough for microbes to enter to seek refuge or food.

Soil bacteria range in size from 1 to 4 µm, while fungal hyphae are 2 to 64 µm,

and predators such as micro-arthropods range from 100 µm to 2 mm (Warnock

et al., 2007). While micropores (less than 2nm diameter) and mesopores (less

than 50nm diameter) are too small for microbes to access, the larger

macropores in biochar can be big enough to provide a habitat (Downie et al.,

2009).

In a study involving different substrates including biochar and pumice,

Pietikainen et al (2000) found that biochar was able to support a larger microbial

population than pumice. The authors also concluded that the porous structure

of biochar may offer refuge to microbes from excessive heat and drying as well

as protection against predators(Pietikainen et al., 2000). Biochar’s ability to

absorb nutrients, gases and organic matter also contributes to an improved

microbial habitat (Pietikainen et al., 2000; Thies & Rillig, 2009; Zackrisson et al.,

1996).

Other studies have shown an increase in arbuscular mycorrhizal fungi in

response to biochar additions (Matsubara et al., 2002; Yamato et al., 2006).

However not all studies show a positive response of micro organisms to

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biochar, with one study showing a neutral or negative response by arbuscular

mycorrhizal fungi to biochar additions in two pot experiments and one field

experiment (Warnock et al., 2010). Another study showed no significant

increase in microbial populations three years after application of biochar in the

field.(Quilliam et al., 2013).

The surface chemistry of biochar is responsible for its adsorption capacity and

therefore its ability to retain nutrients, gases, and organic matter, thereby

creating an attractive microbial habitat (Pietikainen et al., 2000; Thies & Rillig,

2009; Zackrisson et al., 1996). Additionally the elevated pH of the biochar can

influence the type and amount of microbes that can inhabit the biochar, with

microbial diversity being highest at neutral pH and lowest at low pH (Thies &

Rillig, 2009).

Once applied to soil, the pores of high nutrient containing biochar become more

accessible to microbes as the mineral constituents are leached out and

microbes colonise pores (Thies & Rillig, 2009). The presence of soil water in

the pores increases the suitability of biochar as a habitat as does its ability to

absorb nutrients and the carbon substrate, providing microbes with an ongoing

food source (Thies & Rillig, 2009).

2.3.4 Plant Available Nutrients and Liming

One of the key factors controlling plant growth is the availability of essential

nutrients (Brady & Weil, 2008). As previously mentioned , biochars contain

various concentrations of plant available nutrients depending on the source of

organic material (Chan & Xu, 2009). Nutrients in biochar that may be available

for release into soil solution include potassium, phosphorus, and magnesium

(Angst & Sohi, 2013; Mukherjee & Zimmerman, 2013). During pyrolysis, these

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elements combine to form crystals, which are distributed throughout the porous

structure of the biochar. The dissolution of crystals and diffusion of dissolved

ions to soil solution are reduced by tortuosity and may be slowed by condensed

tars and oils blocking pores in fresh biochar (Shackley & Sohi, 2011).

Poultry litter biochars are one of the highest nutrient containing biochars (Chan

& Xu, 2009), which may explain why in a meta-analysis of published pot and

field experiments, poultry litter feedstocks had the largest positive effect on

plant yields (Jeffery et al., 2011). A pot experiment with corn, compared

biochars derived from various feedstocks and concluded that the largest

positive responses occurred with low to moderate (0.2 to 2 % w/w) application

rates of nutrient-rich biochar. Plant growth declined at large application rates

(7% w/w) due to excessive amounts of sodium (Rajkovich et al., 2012). This

result indicates that while the nutrient content of biochar can increase plant

growth in the short-term, excessive amounts of some elements in biochar can

be detrimental to plant growth when large amounts of biochar are applied.

2.3.4.1 Liming

Biochars are usually alkaline (>pH.7) (Chan & Xu, 2009). Additions to soil of

biochar with high levels of carbonates can increase soil pH (Biederman &

Harpole, 2013; Jeffery et al., 2011) and improve plant production on acidic soils

(Van Zwieten, Kimber, Morris, Chan, et al., 2010). Several studies have shown

that increased soil pH due to biochar additions had a deleterious effects on

nutrient uptake and growth of several plant species in alkaline soils (Chan &

Xu, 2009).

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2.3.5 Improved Soil Structure and Texture

Soil texture refers to the size of soil particles and soil structure encompasses

the manner by which the soil particles are aggregated, including the channels

and pores in the soil (Brady & Weil, 2008). The combination of soil structure and

texture are indicative of a soils ability to hold and transmit the water and air that

are required for plant and microbial growth (Brady & Weil, 2008).

Additions of biochar have the potential to improve soil structure and texture by

increasing porosity, changing the particle-size distribution, bulk density, and

soil depth (Downie et al., 2009). Changing the pore size distribution can affect

the water holding capacity of soils. Water in pores of less than 0.2 µm diameter

is not accessible to plants because the matric potential required to extract the

water is too high (Moore et al., 1998). Pore sizes between 0.2 and 30 µm are

able to retain water while making it available for plant uptake, even at the high

matric potentials present in sandy soils (Major et al., 2009). In pores larger than

30 µm water is generally mobile and for pore sizes between 30 and 80 µm

water will move between wetter and drier areas (matric potential differences),

while at pore sizes greater than 80 µm rapid water flow due to gravity can occur

after heavy rainfall, causing leaching events (Major et al., 2009).

Additions of biochar to sandy soils generally increases overall water-holding

capacity since biochar has a higher surface area than sand, whereas the

opposite is true for many clays, which already have high surface areas and

water-holding capacities (Glaser et al., 2002; Tryon, 1948).

Studies on effects of biochar on soil fertility (Busscher et al., 2010; Novak,

Busscher, et al., 2009; Novak, Lima, et al., 2009) have been conducted using

Norfolk loamy sand with poor fertility properties. The incubation periods were

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between 30 and 70 days and biochar additions were between 0 and 20 t/ha

equivalent. Several improvements in soil fertility and structure occurred:

Water holding capacity increased (Busscher et al., 2010; Novak, Lima, et

al., 2009).

Soil penetration resistance decreased (Busscher et al., 2010).

Increased pH (Novak, Busscher, et al., 2009; Novak, Lima, et al., 2009).

Some of the experiments showed no significant improvement in CEC (Novak,

Busscher, et al., 2009) or aggregation (Busscher et al., 2010; Watts et al.,

2005). This contrasts with a 500 day soil incubation experiment (Laird et al.,

2009) on a highly fertile ‘Midwestern’ soil with biochar additions of 0 to 20 t/ha

equivalent, which showed significant improvements in CEC, moisture retention,

plant extractable nutrients, nitrogen retention, bulk density and surface area

when biochar was added to the soil.

The mechanisms responsible for improvements in soil fertility after biochar

addition, including improved soil structure, are not well understood. Some

possible explanations are:

H-bonding with oxygenated functional groups on the biochar surface

may cause water to bind to biochar (Brennan et al., 2001), causing an

increase in water holding capacity. These functional groups tend to

increase with incubation time (Cheng et al., 2008), which suggests that

biochar will become more hydrophilic with time (Bandosz et al., 1996;

Brennan et al., 2001; Cheng et al., 2008).

Biochar also interacts with the soil organic and mineral matrix to form

organo-mineral associations and micro-aggregates (Amonette & Joseph,

2009; Brodowski et al., 2006; Czimczik & Masiello, 2007; Liang et al.,

2008), which may contribute to soil structure

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The results of several studies (Matsubara et al., 2002; Pietikainen et al.,

2000; Yamato et al., 2006) indicate that biochar may increase microbial

activity, which in turn can improve soil structure. The interplay between

soil particles, biochar, plants and microbes may also contribute to the

development of structure (Brady & Weil, 2008; Thies & Rillig, 2009).

The above factors imply that biochar’s surface chemistry and pore structure are

probably the primary properties responsible for biochar’s impacts on soil

structure.

2.3.6 Negative Impacts

Biochar applications to soil may have negative impacts on human health, the

environment, and plant growth (Biederman & Harpole, 2013; Jeffery et al.,

2011; Shackley & Sohi, 2011). This section will examine the feedstocks and

pyrolysis conditions that can generate biochar and considers organic

compounds, heavy metals, excessive nutrients, and high pH.

2.3.6.1 Organic compounds

Polycyclic aromatic hydrocarbons (PAH) and dioxins are two major groups of

harmful compounds that have been reported to occur in biochar (Shackley &

Sohi, 2011). Some PAH compounds have been shown to be carcinogenic,

mutagenic and/or teratogenic (Shackley & Sohi, 2011). PAH formation, during

the pyrolysis process generally requires temperatures around 750 ºC and long

residence times. Although PAHs can be formed in the temperature range of

400-600 ºC, the amounts reported for biochar, produced below 600 ºC and from

untreated biomass, are small and generally fall between those found in rural

and urban soils on a concentration basis (Shackley & Sohi, 2011). However the

level of PAHs can increase to harmful levels if the biomass is chemically treated

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such as creosote treated pine sleepers, even with pyrolysis temperatures under

600 ºC, (Zhurinsh et al., 2005). Dangerous levels of PAH formation can

therefore be minimised by limiting pyrolysis temperatures and carefully

screening feedstocks that have been chemically treated.

Dioxin formation requires both the presence of feedstock with significant levels

of chlorine as well as pyrolysis temperatures around 750 ºC (Shackley & Sohi,

2011). Therefore checking the chlorine content of feedstock and using lower

pyrolysis temperatures will ensure that dioxins are not formed during the

pyrolysis process.

2.3.6.2 Heavy metals

Heavy metals include a range of toxic elements including arsenic, cadmium,

cobalt, chromium, copper, mercury, manganese, nickel, and lead. Heavy metals

in biochar are derived directly from the feedstock and are found in materials

such as sewage sludge, municipal solid waste and treated wood. Many heavy

metals are retained during the pyrolysis process and are mainly present in

minerals in plant ash (Shackley & Sohi, 2011). It may be possible to remove a

significant amount of these contaminants by removing a large portion of the

mineral grains as outlined by Hwang et al. (2008). Low temperature volatile

heavy metals, such as mercury, lead, and arsenic, are expected to be largely

evaporated by around 500 ºC and leave the process as gas, which should be

managed appropriately (Ryu et al., 2007).

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2.3.6.3 Excessive nutrients

Application to soil of large quantities of high nutrient content biochar can

potentially release nutrients into nearby water systems and cause damage to

the local ecology. High levels of phosphorus can cause eutrophication of

surface waters and excessive levels of elements such as potassium and sodium

can damage plants and soils (Joseph et al., 2009; Rajkovich et al., 2012).

2.3.6.4 Increase in soil pH

At large application rates, some biochars are capable of raising the pH of the

soil to undesirable levels (Chan & Xu, 2009). In general the liming effect of

biochar is desirable for acidic soils (Chan & Xu, 2009; Joseph et al., 2009).

2.4 Review of Pot and Field Experiments

Meta-analyses of the impact of biochar on plant productivity and crop yield

(Biederman & Harpole, 2013; Jeffery et al., 2011), have found an overall small,

but statistically significant, benefit of biochar additions. Biederman and Harpole

(2013) reviewed 371 biochar experiments from 114 published manuscripts,

while Jeffery et al. (2011) used 177 experiments from 16 studies. Their key

findings are outlined below:

An increase in soil microbial biomass, rhizobia nodulation, plant K tissue

concentration, and soil P, K, and total N and C (Biederman & Harpole,

2013).

An increase in soil pH (Biederman & Harpole, 2013; Jeffery et al., 2011).

There was no significant mean response to biochar additions in

mycorrhizal colonisation of roots, plant tissue N, soil P concentration and

soil inorganic N.

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There was no relationship between the biochar application rates and

plant productivity for experiments with multiple biochar application rates,

in individual experiments response to increasing biochar application

rates was negative, neutral or positive (Biederman & Harpole, 2013;

Jeffery et al., 2011).

Most positive effects were for acidic to neutral soils and coarse or

medium textured soils (Jeffery et al., 2011).

Poultry litter feedstocks had the largest positive effect on plant growth,

while biochar made from biosolid feedstock showed the largest negative

effects (Jeffery et al., 2011).

There are large variations in plant growth response to biochar additions, and it

is difficult to identify the specific causes of these variations due to the diverse

biochar feedstocks, pyrolysis conditions, crops, and soil types. Jeffery et al.

(2011) identified the liming effect and the increase in soil’s water holding

capacity due to biochar as the two main mechanisms for increasing plant

growth. There were positive results for acidic to neutral soils and for coarse or

medium textured soils. Biederman and Harpole (2013) identified several

possible mechanisms for increased plant growth including improved water

holding capacity, nutrient addition and improved cycling of phosphorous and

potassium, darker soil colour that could facilitate germination and allow a

longer growing season.

2.5 Conclusions

The literature review indicates that the pyrolysis process is reasonably well

understood. The nature of the feedstock including plant nutrient levels in

feedstocks will influence many attributes of the resulting biochar. Feedstocks

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with high contents of inorganic elements will result in higher ash content and

pH. These biochars may also be more susceptible to microbial attack in the soil

due to their nutrient content possibly modifying the biochar structure. High

values of HTT and heating rate produce more recalcitrant biochars at the

expense of yield. Most studies support a pyrolysis temperature between 350

and 600 ºC, with higher temperatures providing more stable biochar and lower

temperatures giving greater yields.

Apart from recalcitrance and yield, the other important characteristics of biochar

include the pore structure, surface chemistry, and nutrient and pH levels. Pore

structure is mainly derived from its feedstock; however, micropores are heavily

influenced by the pyrolysis conditions. Biochars surface chemistry is very

complex and the many studies have produced different results and conflicting

trends. The liming potential and nutrient content of biochar resides in the

crystalline compounds, which together with amorphous silica constitute the ash

content. The inorganic elements are derived from the feedstock and some

elements such as nitrogen and sulphur can be volatilised during the pyrolysis

process.

The mechanisms by which biochar can improve soil fertility were identified as:

Increased microbial populations by providing habitats and food sources. Increased soil CEC, which retains essential cations for plant growth. Improved soil structure by improving aggregation, water holding capacity

and reducing soil bulk density. Carbon sequestration, while not a soil fertility benefit, the recalcitrance of

biochar provides long-term environmental benefit.

There is conflicting evidence as to whether biochar additions to soil will

generally lead to these processes occurring at a significant level e.g. increases

in microbial populations, and whether any improvements are sufficient to

support increased plant production.

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There are several potentially dangerous compounds and metals that can be

released into the environment by adding biochar to soil, including PAHs and

heavy metals. These risks can be minimised by maintaining HTT under 600ºC

and carefully screening feedstocks for dangerous contaminants. The impacts of

excess nutrients and high pH can also be minimised by carefully assessing the

soil and local geography before applying biochar.

The two meta-analysis results showed on average a small, but significant,

improvement in plant production with biochar addition. Both authors commented

on many important measurements, such as CEC, pH and water holding

capacity, that are not being reported by researchers thus making it difficult to

identify the underlying mechanisms affecting plant production.

Most of the studies reviewed did not appear to consider selecting a specific

biochar to best target the needs of the particular soil they were using. There is a

need for future studies to report more fully on the details of experiments and to

use biochars that would most benefit the specific soil.

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3 EXPERIMENTAL MATERIALS AND METHODS

3.1 Overview

Two previously established field experiments (referred to locally as “trials”) were

used to test the hypotheses and analytical procedures outlined in Chapter 1.

The reasons for choosing existing field trials were:

Biochar properties change over time and many of the suggested

benefits of biochar; such as increased CEC, microbial activity and soil

aggregation take time to fully develop (Brady & Weil, 2008; Hammes &

Schmidt, 2009);

As mentioned previously, some pot experiments have shown changes in

soil structure, however at the commencement of this study, there was no

published literature on the effect of biochar on soil structure in the field,

which provides a much better indicator of the behaviour of biochar in soil

under broad scale farming conditions than do short term pot

experiments.

At the commencement of this research, there were very few established biochar

field experiments in Australia. The first biochar “trial site” was used in this study

is on a wheat farm, “Stanley Farms” near Kalannie, Western Australia and

forms part of the biochar research being conducted by Rainbow Bee Eater Pty

Ltd. Another two field experiments from northern New South Wales were also

selected. The first of these is at Wollongbar Agricultural Institute and the second

at a nearby macadamia plantation, called Maclean’s Ridges. These

experiments were conducted by the Department of Primary Industries. The

major benefit of using a long term established field experiment was being able

to measure changes in the soil due to biochar additions that had occurred

several years before sampling. To commence a new field trial would have

required an interval of several years in order to give the biochar time to interact

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with the soil. This was not possible in the context of a postgraduate research

degree.

The field sites had contrasting soil properties, with the Rainbow Bee Eater trial

being on a sandy earth and the northern New South Wales experiments being

on a red ferrsosol. The different soil types were selected to investigate whether

biochar’s impact differs in contrasting soils. Soil properties are in Tables 3.1 and

3.4 for the Rainbow Bee Eater and Wollongbar Agricultural Institute sites,

respectively.

3.2 Field Sites

3.2.1 Rainbow Bee Eater Biochar Trials

Project ‘Rainbow Bee Eater Trial’ was initiated by Peter Burgess, Syd Shea and

Ian Stanley in 2007 to investigate the feasibility of manufacturing and utilising

biochar in cereal production areas, using local crop and plantation waste as

feedstock. As part of this feasibility study, two biochar experiments were

established on Stanley Farm at Kalannie, W.A. (303444S, 117120 E) in 2008 to

investigate the effect of biochar application on growth of dryland wheat. The

experiments were implemented and managed by the Western Australian

Department of Agriculture and Food with assistance from Ian, Clint, and Travis

Stanley.

The aims of these experiments were to assess:

1. The value of biochar as a soil amendment.

2. The impact of biochar on the yield and quality of wheat.

The soil at the site is a yellow sandy earth (Table 3.1) with 30% or more

ironstone gravel commencing at between 20-40 cm depth across the site.

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Soil Group Yellow sandy earth

Profile hydrology

group

Possible deficiencies* and toxicities

Main limitation to sustainable

production

Distribution Australian Soil Classification**

-Yellow within top 30cm -Neutral to acid pH -May be more clayey below 80 cm -Gravels may be present -Usually massive or poorly structured

Uniform coarse textured soil (grading to medium to fine-textured at depth )

Deficiencies -N, P, Mo, Cu, Zn Toxicities -Al in subsoil if pHca <4.5

-Subsurface compaction -Wind erosion -Low soil water storage

Western Australian wheatbelt

Kandosol

Table 3-1 Properties of yellow sandy earths, adapted from Moore (1998) *Nutrient

deficiencies may occur, but their severity is strongly influenced by prior land management; **(Isbell, 1996)

Two types of biochar were produced for the experiment. One was made from

South African wheat straw and was produced by Alterna Energy Pty Ltd,

Johannesburg. The other biochar, which was made from Western Australian oil

mallee residue, was produced by Ansac Pty Ltd, Bunbury, W.A. The pyrolysis

plants for the production of the biochars were a continuous process at both

locations. The highest treatment temperature (HTT) for the two types of biochar

was 480 degrees Celsius. The wheat straw biochar was finely crushed and had

a large dust component while the oil mallee biochar was coarser and had less

dust.

Analyses of the biochars (Table 3-2) shows that mallee biochar has higher

nitrogen (N) and sulphur (S) concentrations compared with the wheat straw

biochar and lower carbon (C) and ash concentrations (Davies et al., 2009).

Biochar type N % C% S% C/N Ash %*

Wheat straw 0.88±0.05 78.1±2.8 0.15±0.03 89±8 12.5

Mallee residue 1.29±0.02 66.5±1.0 0.29±0.06 52±1 5.8

Table 3-2 Nitrogen, carbon, and sulphur concentrations and C:N values for wheat straw and mallee biochars. Values are means for three replicate samples ± standard error of the mean from Davies et al. (2009) * data provided by P. Burgess on behalf of Rainbow Bee Eater Pty Ltd

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XRF elemental analysis of biochar ash (the ash remaining after C, N, S and

water have been removed by burning) indicates that the wheat straw biochar

ash has higher concentrations of silicon (Si), potassium (K), phosphorus (P) and

copper (Cu), whilst the mallee biochar contains considerably more calcium (Ca)

and magnesium (Mg) (Table 3-3) (Davies et al., 2009).

Biochar ash type

Al % Si% Fe% Mn% Ca% K% Mg% Na% P% Cu

mg/kg

Zn

mg/kg

Wheat straw

3.1

±0.2

66

±0.4

1.7

±0.3

0.1

±0.01

4.2

±0.5

10.9

±1.5

2.5

±0.3

2.3

±0.3

4.0

±0.4

328

±12

280

±51

Mallee residues

4.0

±0.3

46

±1.4

4.3

±0.8

0.5

±0.03

24.7

±1.3

3.6

±0.2

4.8

±0.3

2.4

±0.1

1.8

±0.1

242

±18

349

±59

Table 3-3 XRF elemental analyses of wheat straw and mallee biochar ash. Values are for % oxide apart from Cu and Zn, which are mg/kg. Values are means of three replicate samples ± standard error of the mean from Davies et al. (2009)

3.2.2 Field Experiment Design

The experiment used a randomised complete block design with 4 replicates in 4

banks comprising 80 plots. Both cultivated and uncultivated plots were used.

The treatments applied in early June 2008 included mallee and wheat straw

biochar additions at rates of 0, 10, 20, 60 and 100 t/ha spread by hand over 4 x

1.8 m area plots and fully incorporated throughout the topsoil to a depth of 12

cm using a rotary hoe. Fertiliser (‘Agstar’: 14.1% N; 14.1% P; 9.2% S; 0.1% Cu;

0.2% Zn) was applied at either the local standard rate of 100 kg/ha or a half rate

of 50 kg/ha (Davies et al., 2009).

Soil sampling of selected treatments first took place in September 2008, three

months after the application of biochars. Samples were analysed for pH,

available phosphorous, available sulphur, organic carbon, and total carbon

(appendix 1).

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The pH of uncultivated and unlimed soil is acidic (Figure 3-1), reaching a

minimum value at 10-20 cm depth. Cultivation slightly decreased the pH in the

upper layer (0-10cm) of the soil and increased pH in the 10-20 cm layer due to

the mixing of top and subsoil. The addition of both types of biochar increased

the pH for the 0-10 and 10-20 cm soil layers but had no significant effect for the

20-30cm layer, presumably because this was beyond the cultivation depth of

the rotary hoe.

Figure 3-1 Impact of application of mallee and wheat biochar at rates of 10 and 60 t/ha on soil pH at 5, 15 and 25 cm soil depth, compared to controls with and without cultivation at the Rainbow Bee Eater site, Kalannie, 2008 from Davies et al. (2009).

Soil organic carbon and total soil carbon in the 0-20 cm soil layers increased

with biochar addition (Figure 3-2). Wheat straw biochar had a greater effect on

total and organic soil carbon than mallee biochar.

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Figure 3-2 Impact of mallee and wheat straw biochar additions (at full fertiliser rate) on soil organic carbon (A) and total soil carbon (B) at Rainbow Bee Eater site, Kalannie, 2008 (Davies et al., 2009).

Biochar additions may have both short-term and long-term benefits for plant

growth. Short-term benefits include an increase in soil nutrients as they are

leached from the biochar and an increase in soil pH due to the carbonate

content of some biochars (Chan & Xu, 2009). The initial wheat yield results

from the first harvest in 2008 (Davies et al., 2009) by Rainbow Bee Eater Pty

Ltd showed a large variability in wheat yield with no systematic increase in yield

due to addition of biochar. This is probably because the nutrients were not the

limiting factor for plant growth and the liming value of the biochar was not high

enough to lift the soil pH to a more productive level. Inadequate rainfall is also

often the prime factor limiting yield in the Western Australian wheatbelt.

However as mentioned previously, some of the benefits from biochar addition

can take time to develop. This is illustrated for maize in a field experiment in

Columbia that showed no yield increase in the first year, but the following three

years the yield increased by 28, 30 and 140% consecutively, compared to the

control (Major et al., 2010). The delayed benefits of biochar may be

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attributable to increased CEC, microbial activity and soil aggregation (Brady &

Weil, 2008; Hammes & Schmidt, 2009; Lehmann et al., 2009; Major et al.,

2010). Therefore, despite these initial inconclusive results for the present

research, further research was required to assess whether biochar had the

potential to alter properties of the soil, including structure. The benefits that

might be expected for the Rainbow Bee Eater site include improved yields in

drier years and lower levels of erosion, along with non-structure related

improvements such as improved CEC, chemical fertility and higher levels of

beneficial soil fungi (Busscher et al., 2010; Hammes & Schmidt, 2009; Laird et

al., 2009; Major et al., 2010; Thies & Rillig, 2009).

3.2.3 Soil Sampling

In the present study, the soil was sampled on two occasions from the field site

from the top 80 mm of the soil. This was conducted in November 2010 and

August 2011, which was some 2 and 3 years after the commencement of the

experiment.

In November 2010, the samples were taken from plots, representing 5

treatments:

The control (zero biochar; regular fertiliser);

60 tonnes/ha wheat straw biochar (regular fertiliser);

100 tonnes/ha wheat straw biochar (regular fertiliser);

60 tonnes/ha mallee biochar (regular fertiliser);

100 tonnes/ha mallee biochar (regular fertiliser).

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In August 2011, additional soils samples were obtained from the following

mallee biochar treatments, as the sole aim was to recover biochar fragments,

which was not possible for crushed wheat straw biochar:

10 tonnes/ha mallee biochar (regular fertiliser);

20 tonnes/ha mallee biochar (regular fertiliser);

3.2.4 Wollongbar Agricultural Institute Biochar Site

Wollongbar Agricultural Institute is run by the New South Wales Department of

Industry and Investment. It is situated in northern New South Wales (288500S,

1538250E). The biochar experiment was established on a red ferrosol in

November 2006 (Table 3-4) and the biochar was incorporated into the soil to a

depth of 10 cm. The experiment consisted of a randomized design with three

replicates for the following treatments:

Control A (zero biochar, zero lime, zero fertiliser).

Control B (zero biochar, added lime, zero fertiliser).

Control C (zero biochar, zero lime, added fertiliser).

Biochar 1A (10t/ha dairy waste biochar, zero lime, zero fertiliser).

Biochar 1B (10t/ha dairy waste biochar, added lime, zero fertiliser).

Biochar 1C (10t/ha dairy waste biochar, zero lime, added fertiliser).

Biochar 2A (10t/ha green waste biochar, zero lime, zero fertiliser).

Biochar 2B (10t/ha green waste biochar, added lime, zero

fertiliser).

Biochar 2C (10t/ha greenwaste biochar, zero lime, added fertiliser).

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SOC (%) N (%) pH (CaCl2)

Bulk density (g/cm3)

Texture (USDA)

Clay (%) Silt (%) Sand (%)

Soil 4.4±0.12 0.45±0.01 4.5 1.01 Clay 65 16 9

Table 3-4 Soil properties (0-10 cm) for Wollongbar Agriculture Research Institute Biochar site from Scheer et al. (2011)

For the Wollongbar site, soil samples from the top 80 mm were taken from the

three replicates for control C and biochar 2C to measure any changes in

attributes due to the addition of green waste biochar. The green waste biochar

was derived from municipal green waste and was produced by BEST Energies

Australia unit at Somersby, NSW with a highest treatment temperature (HTT) of

550 °C, at a heating rate of 5–10 °C min−1. The green waste materials were

sourced from a single source, whole-tree residue and chipped and screened to

<15 mm (Slavich et al., 2013), the chemical analysis of the biochar is given

below (Table 3-5).

Biochar type N % C% S% C/N P

(mgkg-1)

Ca % K % pH

(CaCl2

1:5)

EC

(dS m−1)

Green waste 0.22 76 0.008 345 190 0.17 0.17 7.8 0.14

Table 3-5 Chemical analysis of green waste biochar from Slavich et al. (2013).

3.2.5 Maclean’s Ridges Macadamia Biochar Experiment

Maclean’s Ridges Macadamia farm (287831S, 1534190E) has the same red

ferrosol soil as the nearby Wollongbar Agricultural Research Institute. The

biochar experiment was established in October 2007 at the same time as the

macadamia trees were planted. The biochar used was made from the waste of

an Australian paper mill and was produced by BEST Energies Australia. The

biochar feed material contained 32.6% (by mass) enhanced solids reduction

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(ESR) sludge, 18.8% clarifier sludge and 48.6% waste wood chips. An analysis

of the biochar is in Table 3-6.

Each tree was given 40 kg of biochar, with some of the biochar applied in the

hole dug for the tree and the remaining biochar incorporated in a 0-150mm

layer in a 1.5 m radius of the tree. This represents approximately 60 t/ha. In

addition to standard fertilisers, compost was also regularly applied to all trees.

Biochar type

N % C% S% C/N P% Ca % K % pH (1:5

CaCl2)

EC (dS m−1)

Paper mill waste

biochar

2.5 38 0.18 15.2 0.56 11 0.41 6.8 1.3

Table 3-6 Chemical analysis of paper mill waste biochar from Martin et al. (2012) and Van Zwieten, Kimber, Morris, Downie, et al. (2010)

The trial consisted of a randomized design with four replicates for each

treatment (with or without biochar). In the current study, the top 80 mm of the

soil was sampled from three replicates for trees with and without biochar

additions, to measure any changes in soil attributes due to the addition of paper

mill waste biochar.

3.3 Bulk density

Bulk density measures the mass of a dry soil per unit volume of soil. The

volume includes solids and the pores. Fine textured soils such as clays, clay

loams and silt loams have a lower bulk density than sandy soils. This is

because the fine textured soils tend to have more within-ped pores than sandy

soils (Brady & Weil, 2008). High bulk density soils have a reduced porosity,

which may lead to reduced root growth, reduced aeration and lower water

infiltration and can lead to a reduction in crop growth (Pagliai et al., 2004).

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The field based methods for determining bulk density include measurement of

water replacement and gamma attenuation/scattering (Cresswell & Hamilton,

2002). Laboratory-based assessment of bulk density utilises specimens from

the field, such as the intact core or clod methods (Cresswell & Hamilton, 2002).

The intact core method was used in this experiment. This is a commonly used

and established method for determining bulk density and generally provides

more reliable results than the clod method. Stony or dry soils can make it

difficult to obtain intact cores, which can result in errors (Cresswell, 2002).

In the current study, the core sampling tube was 73 mm in diameter and 75 mm

in length and was constructed of stainless steel. A sharpened cutting edge was

created on the cylinder to minimise soil disturbance in the core (Figure 3-3). A

core guide was created using a PVC tube with a round base attached with

supports either side (see Figure 3-4) to minimise impact on the soil around the

core.

Figure 3-3 Photographs of the sampling tube, with sharpened cutting edge used to measure bulk density.

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Figure 3-4 Photo of the core guide used for taking undisturbed soil samples.

3.3.1 Rainbow Bee Eater Site Bulk Density Sampling

During November 2010 the soil was too dry to take core samples directly so

consistent with common practice the plots were wetted up using a low pressure

hose attached to a portable water storage tank in the late afternoon and

sampling was carried out the following day. Three plots for each treatment (0

t/ha, 60 t/ha, 100 t/ha) with wheat straw and mallee biochars were sampled. On

August 2011, the soil was moist enough to take samples without the need to

wet the soil. Again three plots for each treatment (10 t/ha, 20 t/ha) of mallee

biochar were sampled. The wheat straw biochar plots were not sampled at this

time. This was since the earlier results from the wheat straw and mallee biochar

treatments for bulk density, water holding capacity and aggregate stability were

not significantly different from each other and the practical reason that the

wheat straw biochar amended soils were extremely dusty at the time. After

Core guide

Supports

Base

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clearing the soil surface of vegetation and litter, the core sampling tube was

inserted into the soil using a core sampler to ensure the tube went in straight.

Two cores were taken from each plot, following the intact core method (method

503.01) in Cresswell and Hamilton (2002), giving a total of six samples per

treatment. The cores were trimmed to ensure ends were level and were double

bagged to ensure they were air-tight. The cores were transported to the

laboratory where they were weighed, oven dried (105ºC) and reweighed.

The bulk density (gcm-3) was calculated by dividing the oven dry soil weight by

the volume of the core sampling tube.

3.3.2 Wollongbar Agricultural Institute and Maclean’s Ridges Macadamia

Sites Bulk Density Sampling

Soils were sufficiently wet to enable core sampling, although the top few

centimetres of soil at the Maclean’s Ridges had started to dry, making the

surface slightly crumbly. After clearing the surface of vegetation and litter, the

core sampling tube was inserted into the soil using the core sampler guide to

ensure the tube went in straight. At both Wollongbar and Maclean’s Ridges

sites, three plots for each treatment (control and added char) were sampled.

Two cores were taken from each plot, following the intact core method (method

503.01) in Cresswell and Hamilton (2002), giving a total of six samples per

treatment. The cores were trimmed to ensure ends were level and were double

bagged to ensure they were airtight. The cores were transported to the

laboratory where they were weighed, oven dried (105 ºC) and reweighed.

The bulk density was calculated by dividing the oven dry soil weight by the

volume of the core sampling tube.

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3.4 Friability and strength

Soils are friable if the clods (large aggregates) are not hard or sticky. Soil

friability is greatest when aggregates have a high tensile strength compared to

clods. This allows tillage to break up large clod type aggregates but leaves the

remaining aggregates intact. Soil friability varies greatly with moisture content,

with each soil having an optimum water content for maximum friability. The ideal

time for tillage is when friability is the greatest for that soil. Soil carbon content

has been related to increased soil friability (Watts & Dexter, 1998).

3.4.1 Rainbow Bee Eater Biochar Experiment

In the current study, soil strength was measured using a hydraulic penetrometer

(manufactured by the Meter Man, David von Pein), which measures the

resistance that the soil offers to a penetration probe. The following treatment

plots were measured: four plots with 0 t/ha biochar addition, eight plots with 60

t/ha biochar additions and eight plots with 100 t/ha biochar additions. Three

penetrometer readings were taken at 10 cm depth for each plot. A reading

greater than 4000 kPa was assumed to be due to the penetrometer hitting a

stone; in this case, another reading was taken nearby.

3.5 Soil Water Characteristic

The soil water characteristic is the relationship between the volumetric water

content (θ) and the matric potential (ψ). The volumetric water content of a soil

sample is determined by dividing the volume of water by the volume of the soil.

(Cresswell, 2002).

The matric potential is a measure of the mutual attraction between water and

soil particles (Cresswell, 2002). Energy is required by plants to overcome the

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matric potential to extract water from the soil. Matric potential can be defined as

work per unit mass (J/kg), or per unit volume (N/m2), or per unit weight

(m)(Cresswell, 2002). The matric potential is also often expressed as negative

pressure (or suction) (kPa).

There are many methods to determine matric potential, such as the pressure

plate apparatus, heat dissipation sensors, dew point potential meters and

thermocouple psychrometry (Bittelli & Flury, 2009). For the present study, the

pressure plate apparatus was chosen since it is the most commonly used

method and is considered to be the standard technique for measuring soil

water retention at an imposed matric potential (Cresswell et al., 2008). With

this technique a saturated soil sample in placed on a porous ceramic plate and

placed inside a pressure chamber. The underside of the plate is at atmospheric

pressure but the soil samples are pressurised at a pre-determined pressure.

This creates a hydraulic gradient causing water to flow from the soil samples

through the saturated plate until the soil samples are in equilibrium with the

imposed pressure (Cresswell et al., 2008). In the present study, the soil water

retention was measured at the following matric potentials: 0 kPa (atmospheric

pressure), 10 kPa, 100 kPa, and 1500 kPa.

There are recognised errors associated with pressure plate apparatus, which

are mainly related to fine textured and swelling soils (Cresswell et al., 2008;

Solone et al., 2012). The soil at the Rainbow Bee Eater site is a sand so is

unlikely to be greatly affected by these inherent limitations of the method. Note

the clay soils at Wollongbar and Maclean’s Ridges are both fine textured and

swelling soils so some overestimation may have occurred.

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3.5.1 Rainbow Bee Eater Biochar Experiment

Soil samples were taken from three field plots for each treatment (table 3-7).

The soil was air dried and sieved to 2 mm. Two samples from each plot were

then used to measure the water content at each matric potential (0, 10 kPa, 100

kPa, 1500 kPa), giving a total of six samples per treatment per matric potential.

The soil water retention characteristic was measured using pressure plate

equipment following Method 504.02 (Cresswell, 2002) .

Mallee biochar (t/ha)

Wheat straw biochar (t/ha)

0, 10, 20, 60, 100 0, 60, 100

Table 3-7 Biochar treatments used for measurement of water content at various matric potentials.

3.5.2 Wollongbar Agricultural Institute and Maclean’s Ridges Biochar

Experiments

Soil samples were taken from three field plots for the control and the 10 t/ha

treatments at Wollongbar and the control and 60 t/ha treatments at Maclean’s

Ridges. The soil was air dried and sieved to -2 mm. Two samples from each

plot were then used to measure the water content at each matric potential (0, 10

kPa, 100 kPa, 1500 kPa), giving a total of six samples per treatment per matric

potential. The soil water retention characteristic was measured using pressure

plate equipment following Method 504.02 (Cresswell, 2002) .

3.6 Aggregate distribution, stability and resilience

Aggregates consist of a range of soil mineral particles, organic matter, plant

roots, fungi, and biological exudates. They are formed through various physical,

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chemical and biological forces, with different forces being more prominent for

different sized aggregates and soil types (Brady & Weil, 2008).

Aggregates can be affected by both abiotic and biotic factors, with the relative

contributions of these two factors differing for different soil types (Denef & Six,

2005; Tisdall & Oades, 1982). Smaller aggregates tend to rely more on abiotic

bonds and larger aggregates on biotic bonds (Brady & Weil, 2008).

The stability of a soil aggregate is dependent on its ability to withstand

disruptive forces (Kemper & Rosenau, 1986). The disruptive forces include

wetting, wind, freezing/thawing, raindrop impact, traffic, and tillage on

agricultural land. It is impossible to replicate and measure the combined

impacts of all these factors in the laboratory and so tests are typically designed

to measure one particular force. This force which may be internal (wetting,

slaking), external (tillage, drop-shatter) or fracturing using measurements of

shear and /or tensile failure (Diaz-Zorita et al., 2002).

One of the more common methods for determining aggregate stability reported

in scientific literature is wet sieving (Candan & Broquen, 2009; Jiao et al., 2006;

Kasper et al., 2009; Kemper & Rosenau, 1986; Piccolo et al., 1996, 1997;

Taboada et al., 2004). Wet sieving has the advantage of combining nearly all

the potential breakdown mechanisms, but tends to overemphasise slaking

(LeBissonnais, 1996), however this can be reduced by slowly pre-wetting the

aggregates before they are immersed in water (Kemper & Rosenau, 1986).

The modified Yoder apparatus with a single sieve as described by Kemper and

Rosenau (1986), is frequently used for wet sieving (Seybold & Herrick, 2001).

However, this piece of equipment is expensive to purchase and is not widely

available in academic settings; the modified Yoder apparatus at the University

of Western Australia was not in working order at the time it was required

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(although repaired at a later time). It was therefore decided for the present study

of RBE soils to make a special purpose manually operated modified Yoder

apparatus following instructions from Seybold and Herrick (2001) (Figure 3-5).

Figure 3-5 Manually operated aggregate stability device following design of Seybold and Herrick (2001) used in the current study.

3.6.1 Rainbow Bee Eater Biochar Trial

Table 3-8 lists the treatments that were tested with the manual modified Yoder

apparatus. The air-dried soil obtained from the top 80 mm of the soil profile was

sieved to obtain the 0.5 – 2 mm fraction. Approximately 10 g of soil was placed

in a sieve with an aperture of 0.25 mm. The soil was wetted slowly by capillary

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action by placing the sieve on a wet terry cloth. The sieve was then placed in a

manual wet sieving device, which was raised and lowered a vertical distance of

1.5 cm at a rate of 30 cycles per minute for three minutes as outlined in Seybold

and Herrick (2001). After oven drying (105ºC) and weighing, the sieve was

placed in a chemical dispersant (10 g/l Sodium hexametaphosphate solution)

for 5 minutes, agitated and rinsed under running water then oven dried (105ºC)

and reweighed to determine the sand content. The proportion of water stable

aggregates is based on the aggregates remaining after wet sieving minus the

sand content; divided by the initial soil weight minus the sand content.

Mallee biochar (t/ha)

Wheat straw biochar (t/ha)

0, 10, 20, 60, 100 0, 60, 100

Table 3-8 Biochar treatments used to measure wet aggregate stability.

Some measurements were later made on the automated Yoder apparatus at

the University of Western Australia to check if there were any significant

differences in results between the manual and the automated wet-sieving

operations. Two different soil treatments were investigated, the control and the

100 t/ha mallee biochar.

3.6.2 Wollongbar Agricultural Institute Site

The soils used to measure the aggregate stability were the control and the 10

t/ha treatment at Wollongbar, and the control and 60 t/ha treatment at

Maclean’s Ridges. The soil obtained from the top 80 mm of the soil profile was

air dried and sieved to obtain the 0.5 – 2 mm fraction. The manual method of

measuring aggregate stability (described above) was used.

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3.7 Scanning Electron Microscopy (SEM) and Energy-

Dispersive X-Ray Spectroscopy (EDS)

SEM and EDS analysis was undertaken to investigate biochar recovered from

soil and the nature of changes in soil structure due to biochar additions. The

purpose of this analysis was to visually identify whether the biochar had been

incorporated into soil aggregates and whether there were any fungi present in

aggregates. The EDS analysis was used to identify clay and other minerals

within and adhering to the biochar.

Scanning electron microscopy (SEM) can readily detect particles as small as 1

µm (Stoffyn-Egli et al., 1997). However, the grey-scale of the images produced

by SEM can often make visual distinction between adjacent, similar particles

difficult. SEM can be used to view specimens as either a secondary electron

image or a backscattered electron image. Secondary electron (SE) images are

produced from electrons emitted from the specimen’s surface when it is struck

by the primary electron beam. These images reveal information about the

specimen’s surface, such as changes in topography. Backscatter (BS) images

are from the scattering of the primary electron beam after hitting the specimen’s

surface. The images produced from these electrons impart information about

the composition of the specimens. Particles in the specimen containing heavy

(higher Z) elements are displayed as bright spots in BS images. Energy-

dispersive spectroscopy (EDS) can enhance the information provided by a SEM

image by determining the chemical composition of particles and mapping the

distribution of elements in samples (Stoffyn-Egli et al., 1997).

In this study, the biochar was collected from soil at the Rainbow Bee Eater site

in late August, 2011.

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The SEM facilities are located at The Central Scientific Services Unit at

Newcastle University, NSW. The SEM was a Philips XL30 and the EDS was an

Oxford ISIS (1997).

Specimens were chosen after examining soil aggregates and biochar particles

under a stereo optical microscope. Materials investigated included the external

surface of soil aggregates containing visible biochar, external surfaces of

biochar particles and the internal surfaces of biochar particles that were sliced

with a scalpel. Specimens were transferred to a metal stub that was covered in

conductive carbon sticky tape. The specimens were then carbon coated to

minimise charging of the specimen surface using an SPI Carbon coating unit

(1997).

Images and EDS data were taken with an accelerating voltage of 15kV, a

working distance of approximately 10mm, and a 1nA probe current. Both

secondary electron and backscatter images were taken of the specimens. EDS

analysis was then used to identify the chemical composition of any materials of

interest.

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4 PHYSICAL CHARACTERISTICS OF BIOCHAR

TREATED SOILS - RESULTS AND DISCUSSION

Soil sampling was conducted on plots where biochar field experiments had

been running for several years. The sites selected for sampling covered several

soil types, biochar treatment levels, environmental conditions, and farming

types.

Three key soil physical characteristics of these samples, namely, bulk density,

water holding, and aggregate stability, were then measured and results

compared to expectations based on the literature.

The change in soil characteristics and consequent benefits of biochar additions

to sandy soils were measured. This data was compared to the changes in soil

characteristics for clay soils with biochar additions.

The soils were examined for any evidence of secondary benefits of biochar

such as increased biological activity or aggregation. Specifically, whether the

benefits of biochar additions described in the literature for short-term

experiments, could be shown to have made a measurable difference in soil

properties in the longer term under field conditions.

Table 4-1 gives the percentage of biochar per weight for each of the RBE

treatments. These calculations are based on the assumptions that both wheat

straw and mallee biochars have a bulk density of 0.3 Mgm-3 (Sohi, 2011), which

is the same value used to calculate the theoretical bulk densities in the following

section; and that the biochars are contained within the top 12 cm of the soil

profile.

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Treatment

(t/ha)

Weight

%

Volume

%

10 0.6 2.8

20 1.2 5.6

60 3.9 16.7

100 7.3 27.8

Table 4-1 Percentage of biochar by weight and volume for each treatment at the Rainbow Bee Eater Site. (Assumes a bulk density for the biochars of 0.3 Mgm-3 and biochar was contained in the top 12 cm of the soil profile.)

4.1 Bulk Density

As detailed in Chapter 3, soil sampling in this study was from biochar field plots

from an experiment that had been running for a number of years. The bulk

densities of these soil samples were investigated to quantify the impact of

different biochar types and application levels.

4.1.1 Theoretical Bulk Density

The measured soil bulk density was compared with the control for each site and

also compared to the theoretical bulk density.

A theoretical bulk density was calculated for each treatment using the weighted

numerical average of the bulk density (equations 1 and 2 below). The

theoretical bulk density assumes the biochar was laid on the surface of the soil

and then the bulk density of the top section of the biochar and soil were

sampled that is, there was no mixing of biochar into the soil, no interaction

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effects, or compaction of the biochar. The amount of soil used in the calculation

is discussed in further detail below.

At the Rainbow Bee Eater field site the biochar was not simply laid on the

surface; instead it was mixed with the soil, using a rotary hoe to a depth of

12cm. The mixing of the biochar and soil with the rotary hoe combined with

rain, plant and fungal growth, and compaction from planting and harvesting will

have affected bulk density and other properties of the soil. The biochar was

similarly incorporated into the soil for the Wollongbar and Maclean’s Ridges

sites to depths of 10 cm and 15 cm, respectively.

The biochars used in the different experiments had various physical forms. The

wheat straw biochar was finely crushed and had a large dust component while

the oil mallee biochar was much coarser and had less dust. In the field, it was

easy to pick which plot had received a given biochar type by examining the size

of biochar particles. As can be seen in Figure 4-1, the mallee biochar treated

soil (a) had easily visible fragments of biochar, with many pieces over 1 cm

long, whereas wheat straw biochar (b) gave the soil a black appearance with

many of the biochar particles being less than 0.01cm.

The initial bulk densities of the biochars used in the field experiments were not

measured. For the purpose of calculating the theoretical soil bulk density in this

study, biochars used in the field trials were assumed to have had a bulk density

of 0.3 Mgm-3, this is within the published range of wood-derived charcoal (Sohi,

2011) and the practical experience of industrial sponsors of this work for a

range of biochars (The Crucible Group).

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Figure 4-1 Photographs of air-dried soil samples from the Rainbow Bee Eater site. a. mallee biochar (100t/ha), b. wheat straw biochar (100t/ha) and c. the control (scale in cm).

The theoretical bulk density was calculated by dividing the combined mass of the

biochar and soil, by the area and the depth to which the soil was mixed in the trial as

shown in equation 1 below:

[ ]

Where Dt = theoretical bulk density (Mgm-3)

ms = mass of soil in 10000 m2 (Mg)

mb = mass of biochar applied per 10000m2(Mg) of soil

= depth to which biochar was mixed into the soil (m)

a. b.

c.

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The mass of the soil (ms) used in the above equation was calculated by subtracting the

depth of the biochar

from the depth to which the soil and biochar was mixed

in the trial ( ). This gives the theoretical depth of the soil. This was then multiplied by

the area (10,000 m2) and the density of the soil (equation 2).

Db = bulk density of biochar (Mgm-3)

Ds = bulk density of soil (control) (Mgm-3)

The bulk density of the soil was taken as the mean value for the control in each trial

compared to the bulk density of biochar was taken as 0.3 Mgm-3.

4.1.2 Results

Tables 4.2 and 4.3 show the mean measured bulk density results for RBE trials,

and the Wollongbar and Maclean’s Ridges trials, respectively, together with the

theoretical bulk densities and measured changes in mean for the control and

theoretical bulk densities. The measured changes in mean for the control and

theoretical bulk densities were calculated using equations 3 and 4, respectively.

Ds = bulk density of soil (control) (Mgm-3)

Dm = mean bulk density of soil for a given treatment (Mgm-3)

Dt = theoretical bulk density (Mgm-3)

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Table 4-2 Comparison of bulk density means (Mgm-3) and variances, including the P-values between treatments and the control at Rainbow Bee Eater trials for mallee biochar (MB) and wheat straw biochar (WSB) *N= number of measurements **not significant

Soil Mean Variance N* P Value Theoretical Change in Mean (%)

Control Theoretical

Wollongbar

Control

10t/ha

1.032

0.998

0.0037

0.0026

6

6

n.s**

p=0.321

1.032

1.0076

0%

-3.2%

0%

-1.0%

Maclean’s

Ridges

Control

60 t/ha

0.921

0.879

0.0013

0.0013

6

6

n.s**

p=0.072

0.921

0.838

0%

-4.6%

0%

4.9%

Table 4-3 Comparison of bulk density means (Mgm-3) and variances, including the P-values between treatments and the control at Wollongbar and Maclean’s Ridges trials. *N= number of measurements, **not significant

Soil Mean Variance N* P Value

Theoretical Measured Change in Mean (%)

Control Theoretical

RBE control 1.47 0.0037 6 1.47 0% 0%

RBE 10 t/ha

MB 1.43 0.0020 6 n.s** 1.44 -2.7% -0.7%

RBE 20 t/ha

MB 1.41 0.0078 5 n.s** 1.41 -4.1% 0%

RBE 60 t/ha

WSB 1.30 0.0052 6 <0.01 1.28 -11.6% 1.6%

RBE 60 t/ha

MB 1.19 0.0080 6 <0.01 1.28 -19% -7%

RBE 100

t/ha WSB 1.13 0.0080 6 <0.01 1.15 -23.1% -1.7%

RBE 100

t/ha MB 1.16 0.010 6 <0.01 1.15 -21.1% 0.9%

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Overall, the results indicate that soil bulk density was reduced by the inclusion

of biochar. There was less than a 2% difference between the mean and the

theoretical bulk density, except for the 60 t/ha mallee biochar and 60t/ha at

Maclean’s Ridges treatments. Statistical analyses for the RBE data showed the

coefficient of determination (r2) for the theoretical bulk density compared to the

measured was 0.73 if all the data was included and 0.8 if the 60t/ha mallee

biochar was omitted.

There was significant variability in measurements from the same treatment.

Physical inspection of samples showed that some samples contained small

stones and roots from previous crops. The field sites sampled were part of a

working farm and subject to various levels of compaction from machinery.

4.1.2.1 Impact of treatment level

There were no statistically significant differences between the measured bulk

densities between the controls and for treatment levels of 10 and 20 t/ha at the

RBE site and the Wollongbar (10t/ha) and Maclean’s Ridges (60 t/ha) sites.

The theoretical reduction in bulk density at the RBE site for the 20 t/ha

treatment was only 4.1%; and for Wollongbar site with a treatment of 10 t/ha the

theoretical reduction was 2.4%. It must be recognised that small changes in

bulk density may be masked by the considerable variability in bulk density in

field soils.

There were however statistically significant differences in bulk density for the

60 and 100 t/ha treatments compared to the controls in the RBE trials, despite

the large variation in individual results for replicates for each treatment (Figure

4-2). The measured RBE results were within 2% of the theoretical bulk density

projections, except for one treatment (60t/ha mallee).

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The Maclean’s Ridges soil had a low bulk density of 0.921Mgm-3. While the

mean for 60t/ha treatment at Maclean’s Ridges was 4.6% less than the control,

the variability in the clay soils was still too large for the number of samples

taken to identify statistically significant differences.

4.1.2.2 Impact of soil type

The already low bulk density of soils from Wollongbar and Maclean’s Ridges

trials was not lowered by biochar additions, even at the 60 t/ha rate at

Maclean’s Ridges. The superior structure of these clay soils meant that even

the large quantities of biochar (100t/ha) added to RBE soils did not decrease

the bulk density. A comparison between the three field sites in Figure 4-2 below

indicates that the soils from Wollongbar and Maclean’s Ridges had lower bulk

densities and less variances than the Rainbow Bee Eater (RBE) soils.

Figure 4-2 Measured bulk densities of soil for the Wollongbar, Maclean’s Ridges and Rainbow Bee Eater (RBE) sites for additions of mallee biochar (MB) and wheat straw biochar (WSB).

0.8

0.9

1

1.1

1.2

1.3

1.4

1.5

1.6

0 20 40 60 80 100

Bu

lk D

en

sity

(Mg/

m3)

Biochar Additions (t/Ha)

Wollongbar trial

Maclean's Ridges trial

RBE trial - MB

RBE trial - WSB

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4.1.2.3 Impact of biochar type

The mallee and wheat straw biochars have different chemical properties

(Tables 3-2 and 3-3) and physical properties, such as pore structure and

particle size. A statistical analysis was conducted to discern if the physical and

chemical differences in the biochars impacted on bulk density measurements.

A statistical comparison of the mallee and wheat straw biochars for the 60 and

100 t/ha treatments is shown in Table 4-4 below. The results for 60 t/ha show

that the values of bulk density for the two biochar treatments were significantly

different, with a higher mean bulk density for the wheat straw biochar treatment

compared to the mallee biochar treatment. However at 100 t/ha the bulk density

values were not significantly different, and the mean bulk density for the wheat

straw biochar treatment was actually lower than for the mallee biochar

treatment.

It is not clear why there was such a large difference between the 2 biochars at

60t/ha. There appear to be several unusually low results for the 60 t/ha mallee

treatment, which resulted in a mean that was 7% less than the theoretical bulk

density, when all other RBE treatments had mean values that were within 2%

of the predicted bulk density.

The lack of a consistent pattern between bulk density values at the 60 and 100

t/ha treatments for the different biochars suggests that there was either a small

difference between the bulk densities or the differences were masked by the

high variability of the results.

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Table 4-4 Comparison of soil bulk density mean values (Mgm-3) and variances, including the P-values for differences between mallee biochar (MB) and wheat straw biochar (WSB) for 60 and 100 t/ha treatments at the Rainbow Bee Eater site

4.1.3 Discussion

Biochar additions to soils for the Wollongbar and Maclean’s Ridges field sites

made no significant difference to the bulk density of the soils. In the case of the

RBE site, the results for soil bulk density for the various treatments have high

variability but the measured data followed the same downward trend as the

theoretical bulk density for both mallee and wheat straw biochars. As mentioned

in section 4.1, the theoretical bulk density was calculated using a simple

weighted numerical model and assumed no mixing or compaction of the various

soil-biochar treatment combinations. It was expected that this theoretical bulk

density would be lower than the measured bulk density because the effects of

mixing and compaction would cause the soil and biochar to become more

packed. There are possible explanations as to why the measured bulk density

was lower than expected: firstly it may be that the biochar particles have largely

remained separated from the soil particles and due to their sizes and shapes

the soil and biochar particles have not formed a well graded soil and packing

has not occurred. A second possibility is that other processes were occurring in

Treatment Mean Variance N* P Value

60 t/ha MB

60 t/ha WSB

1.19

1.30

0.0080

0.0052

6

6

<0.05

100 t/ha MB

100 t/ha WSB

1.16

1.13

0.0101

0.0080

6

5

n.s**

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the treatments containing biochar, such as increased soil aggregation,

increased soil fungal hyphae or other soil microbes.

These potential processes were further examined by measuring soil water

content and water stable aggregates as well as examining samples using a

scanning electron microscope and EDS analysis. Regardless of the processes

occurring in the soil, the simple numerical model used to calculate the

theoretical bulk density was a good predictor of measured bulk density

4.2 Volumetric Soil Water Content

Biochars have a large amount of pores in the correct size range (0.2-50 µm) for

retaining plant available water (Abel et al., 2013). The addition of biochar to a

soil could be expected to increase the volumetric soil water content in the matric

pressure range corresponding to water available to plants.

The porosity of biochar will vary depending on the structure of the original

biomass and the pyrolysis process (including pre and post handling, heating

rate and maximum temperature) (Downie et al., 2009). The diverse physical

characteristics of biochars have been shown to produce very diverse water

holding capacities ranging from 0.77 to 11.1 gg-1 (Kinney et al., 2012).

For this study, the effects of different soil types, biochar types, and treatment

levels on volumetric soil water content were measured.

4.2.1 Theoretical Soil Water Content

The measured volumetric soil water content of the field trial samples was

compared with both the control for each trial and to the theoretical soil water

content.

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The theoretical soil water content was calculated for each treatment using the

weighted numerical average of soil and the biochar water holding capacities.

The water holding capacities of the different biochars prior to being used in the

field trials had not been measured. The gravimetric water holding capacity of

apple tree and corn stover biochars produced at a pyrolysis temperature of 400

degrees Celsius have been reported at 7.7 gg-1 and 10.1 gg-1, respectively

Kinney et al. (2012). These field capacities were determined using 300-700g

samples of biochar, rather than a single biochar particle. For the present study,

an average of these two values (9 gg-1) was used as the theoretical field

capacity for the biochars in these field trials. Based on a value of 0.3 Mgm-3 for

the biochars bulk densities, the theoretical field capacity of the biochar was

therefore taken to be 2.7 m3m-3.

The field capacity was calculated for each treatment for RBE (10, 20, 60, and

100 t/ha), Wollongbar (10t/ha) and Maclean’s Ridges (60t/ha) trials using

equation 3 below:

[3]

Where, θ= field capacity of the treatment (mm-3)

= percent volume of biochar in the soil (%)

= the mean field capacity of the soil with no added

biochar (m3of H2O/ m3 soil)

4.2.2 Results

Field trial samples were tested at a range of matric potentials to identify any

change in water holding capacity compared to the controls. Figure 4-3 presents

the volumetric soil water content for the Rainbow Bee Eater mallee biochar (10,

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20, 60 and 100 t/ha) and wheat straw biochar (60, 100 t/ha) treatments at

several different matric potentials.

The general characteristics of the results are as expected, with soil water

content decreasing as suction increases for all the treatments and the

volumetric water content converging at the permanent wilting point at 1500kPa.

Figure 4-3 Comparison of Moisture Retention Characteristics for 0, 60, 100 t/ha of wheat straw (WSB) and mallee (MB) biochar at 0, 10, 100 and 1500 kPa matric potentials.

The results for RBE (Table 4-5) show that while the mean water content for the

control treatment was lower than for the various biochar treatments at all the

suctions measured, many of the differences were not statistically significant due

to the large variation in individual measurements for each treatment. There

were statistically significant differences between the control and all the

treatments at atmospheric pressure and at 100 kPa. However, at a suction of

1500 kPa, none of the treatments were significantly different from the control.

0.00

0.10

0.20

0.30

0.40

0.50

0.1 1 10 100 1000

Vo

lum

etr

ic W

ate

r Co

nte

nt (θ

), (m

3H

2O

/m3so

il)

Matric Potential Ψ (kPa)

control

10 t/ha MB

20 t/ha MB

60 t/ha MB

100 t/ha MB

mean control

mean 10 t/ha MB

mean 20 t/ha MB

mean 60 t/ha MB

mean 100 t/ha MB

mean 60 t/ha WSB

mean 100 t/ha WSB

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The statistical analysis of the soil water content values for Wollongbar

Agricultural Institute and Maclean’s Ridges Macadamia soils are in Table 4-6.

The analyses indicate that none of the treatments resulted in a statically

significant difference in volumetric water content compared to the controls.

The theoretical and measured field capacities (0 kPa) for the different soil types

and treatments are in Tables 4.7 and 4.8 for RBE, and Wollongbar and

Maclean’s Ridges, respectively.

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Soil 0 kPa 10 kpa 100 kpa 1500 kpa

Mean Variance *N P Value Mean Variance *N P Value Mean Variance *N P Value Mean Variance *N P Value

Control

10 t/ha MB

0.371

0.453

0.00134

0.00059

6

6

<0.01 0.241

0.313

0.00309

0.00080

5

6

<0.01 0.0667

0.0925

8.15E-5

6.77E-5

6

6

<0.01 0.0679

0.0777

8.47E-5

1.04E-4

6

6

n.s**

Control

20 t/ha MB

0.371

0.433

0.00134

0.00037

6

6

<0.01 0.241

0.344

0.00309

0.00015

5

6

<0.05 0.0667

0.0885

8.15E-5

7.81E-6

6

6

<0.01 0.0679

0.0763

8.47E-5

1.16E-4

6

6

n.s**

Control

60 t/ha WSB

0.371

0.480

0.00134

0.00161

6

6

<0.01 0.241

0.291

0.00309

0.00513

5

5

n.s**

0.0667

0.0850

8.15E-5

2.35E-5

6

6

<0.01 0.0679

0.0690

8.47E-5

3.43E-5

6

6

n.s**

Control

60 t/ha MB

0.371

0.476

0.00134

0.000340

6

6

<0.01 0.241

0.284

0.00309

0.00301

5

6

n.s**

0.0667

0.0813

8.15E-5

3.09E-5

6

5

<0.05

0.0679

0.0725

8.47E-5

7.56E-5

6

6

n.s**

Control

100 t/ha WSB

0.371

0.462

0.00134

0.00255

6

4

<0.05 0.241

0.315

0.00309

0.00429

5

4

n.s**

0.0667

0.0910

8.15E-5

2.01E-5

6

4

<0.01 0.0679

0.0753

8.47E-5

1.26E-4

6

4

n.s**

Control

100 t/ha MB

0.371

0.419

0.00134

0.000168

6

6

<0.05 0.241

0.261

0.00309

0.00174

5

4

n.s**

0.0667

0.0830

8.15E-5

9.33E-5

6

6

<0.05 0.0679

0.0703

8.47E-5

3.93E-5

6

5

n.s**

Table 4-5 Means and variances of volumetric water content (m3of H2O/ m3 soil) for mallee biochar (MB) and wheat straw biochar (WSB) treatments at 0, 10, 10 and 1500 kPa matric potentials and P-values between treatments and control. * N is the number of measurements, ** n.s = not significant

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Soil

0 kPa 10 kpa 100 kpa 1500 kpa

Mean Variance *N P

Value

Mean Variance *N P

Value

Mean Variance *N P

Value

Mean Variance *N P

Value

Woll’bar

Control

10 t/ha

0.832

0.853

0.00245

0.00019

6

6

n.s*

0.552

0.568

0.00179

0.00270

6

6

n.s*

0.336

0.334

8.09E-6

3.25E-5

6

6

n.s*

0.288

0.286

1.13E-5

3.32E-5

6

6

n.s*

Maclean’s

Control

100 t/ha

0.812

0.824

0.00247

0.00486

6

6

n.s*

0.413

0.446

0.000393

0.00500

6

6

n.s*

0.323

0.319

0.00026

0.00011

6

6

n.s*

0.281

0.280

0.00021

0.00012

6

6

n.s*

Table 4-6 Means and variances of volumetric soil water content (m3of H2O/ m3 soil) for Wollongbar and Maclean’s Ridges biochar treatments at 0, 10, 100 and 1500 kPa matric potentials and P-values between treatments and control. * N is the number of measurements, ** n.s = not significant

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Soil Measured mean at

field capacity Theoretical

field capacity

% difference from mean

control Theoretical

Control 0.371 0.371 0 0

10 t/ha MB 0.453 0.436 8.2 3.8

20 t/ha MB 0.433 0.501 6.2 -15.7

60 t/ha WSB 0.480 0.759 10.9 -27.9

60 t/ha MB 0.476 0.759 10.5 -28.3

100 t/ha WSB 0.462 1.019 9.1 -55.7

100 t/ha MB 0.419 1.019 12.9 -58.9

Table 4-7 A comparison of measured means and theoretical volumetric water contents (m3of H2O/ m3 soil) at field capacity. MB =mallee biochar, WSB = wheat straw biochar

Soil Measured mean field capacity

Theoretical field capacity

% difference from mean

control theoretical

Wollongbar

Control

10t/ha

0.832

0.853

0.832

0.894

0

2.5

0

-4.8

Maclean’s Ridges

Control

60t/ha

0.812

0.824

0.812

1.063

0

1.5

0

-29

Table 4-8 A comparison of mean measured and theoretical volumetric water contents (m3of H2O/ m3 soil) at field capacity, with percentage differences from the calculated mean for Wollongbar (10t/ha) and Maclean’s Ridges (60 t/ha).

4.2.3 Impact of Biochar Level of Application

The results for RBE in table 4-5 show that the volumetric soil water content for

the treatments at field capacity were significantly greater than for the control in

all cases. The increase was less than that predicted by the simple weighted

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average model of water holding for all but one treatment (10 t/ha mallee

biochar) given in table 4-7.

The more biochar that was added to the soil, the greater the overestimation of

the theoretical field capacity compared to the measured mean value.

A measure of soil water holding capacity is the available water capacity (AWC).

The AWC is defined as the amount of water held in the soil between field

capacity and the permanent wilting point (or between 0.01 and 1500 kPa matric

potentials in Figure 4-3).

Figure 4-4 shows the available water holding capacity for a range of biochar

levels. Results for all the treatments were significantly different from the control

however, there was no consistent increase in available water content above 10

tonnes per hectare of biochar addition. The values of water content for 10 kPa

were similar to values for the control (except for the 10 and 20 t/ha treatments).

They were again significantly different from the control for 100kPa, at which

point the control had no water available for plant uptake, whereas the various

treated samples had between two and four percent AWC.

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Figure 4-4 Mean available water capacity (AWC) for the Rainbow Bee Eater (RBE) treatments with mallee biochar (MB) and wheat straw biochar (WSB). Error bars show standard deviation and all treatments have a p-value less than 0.02 when compared to the control (C).

Soil AWC (m3H2O/m3soil)

0 kPa 10 kPa 100 kPa

Control 0.303 (100%) 0.173 (57%) 0

10 t/ha MB 0.375* (100%) 0.235* (63%) 0.0148* (4%)

20 t/ha MB 0.357* (100%) 0.268* (75%) 0.0122* (3%)

60 t/ha MB 0.404* (100%) 0.212 (52%) 0.0088* (2%)

60 t/ha WSB 0.411* (100%) 0.222 (54%) 0.016* (4%)

100t/ha MB 0.349* (100%) 0.191 (55%) 0.0127* (4%)

100 t/ha WSB 0.387* (100%) 0.240 (62%) 0.0157* (4%)

Table 4-9 A comparison of water capacity (AWC) at different suctions, with percentage of total AWC in brackets for Rainbow Bee Eater (RBE) soil with mallee biochar (MB) and wheat straw biochar (WSB). * significantly different from the control (P<0.05)

0.00

0.10

0.20

0.30

0.40

0.50

0.60

C 10MB 20MB 60MB 60WSB 100MB 100WSB

AW

C (θ

), (

m3H

2O

/m3so

il)

RBE treatments

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4.2.3.1 Impact of soil type

The soil at the RBE site had a very different water holding capacity from soils at

the Wollongbar and Maclean’s Ridges sites.

A comparison between the moisture characteristic curves from Wollongbar and

Maclean’s Ridges soil and the Rainbow Bee Eater soil (control and 100t/ha

mallee biochar treatment) is shown in Figure 4-5. The sandy soil of the RBE site

had only around 50% as much water at field capacity compared to soils at the

other two sites and less than 30% of the wilting point water holding capacity.

The Maclean’s Ridges soils show an unusually sharp decline in volumetric

water holding content between 0 and 10 kPa and diverge from the Wollongbar

soil at 10 kPa pressure, only to converge at 100 kPa. This bizarre result may

indicate a fault in the pressure chamber used for this measurement.

The moisture retention characteristics (Table 5-10), show that the control soils

for Wollongbar and RBE soils retained 50% and 58%, respectively, of their

AWC at 10 kPa suction. By 100 kPa, RBE control soil had no AWC, while

Wollongbar soils still had 9% AWC. When 100t/ha of biochar was added to RBE

soils, there was still 4% of the AWC remaining at 100kPa but water retention of

Wollongbar and Maclean’s Ridges soils was not affected by the addition of

biochar.

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Figure 4-5 Comparison of Moisture Retention Characteristics for soils with and without biochar for Wollongbar (control, 10t/ha biochar), Maclean’s Ridges (control, 60t/ha biochar) and Rainbow Bee Eater (control, 100t/ha biochar) soils at 0, 10, 100 and 1500 kPa matric potentials. RBE – Rainbow Bee Eater trials **MB – mallee biochar

Soil AWC (m3H2O/m3)

0 kPa 10 kPa 100 kPa

Wollongbar

Control

10t/ha

0.544 (100%)

0.567 (100%)

0.264 (49%)

0.282 (50%)

0.048 (9%)

0.048 (8%)

Maclean’s

Ridges

Control

60t/ha

0.531 (100%)

0.544 (100%)

0.132 (24%)

0.166 (31%)

0.042 (8%)

0.039 (7%)

RBE

Control

100t/ha MB

0.303 (100%)

0.349*(100%)

0.173 (57%)

0.191 (55%)

0

0.0127* (4%)

Table 4-10 A comparison of available water capacities (AWC) at different suctions, with percentage of field capacity given in brackets for Wollongbar, Maclean’s Ridges and Rainbow Bee Eater (RBE) soils with mallee biochar (MB). * significantly different from the control (P<0.05)

0

0.1

0.2

0.3

0.4

0.5

0.6

0.7

0.8

0.9

1

0.1 1 10 100 1000

Vo

lum

etr

ic W

ate

r C

on

ten

t (θ

), (

m3H

2O

/m3so

il)

Matric Potential Ψ (kPa)

control Wollongbar

10 t/ha Wollongbar

control Maclean's

60 t/ha Maclean's

mean - control Wollongbar

mean - 10t/ha Wollongbar

mean - control Macleans

mean - 60 t/ha Maclean's

mean - control RBE*

mean 100t/ha MB** RBE*

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4.2.3.2 Impact of biochar type

A comparison between values of water content for the mallee and wheat straw

biochars for 60 t/ha and 100 t/ha rates of application of biochar is given in Table

4-11. Although the mean values were higher for wheat straw than mallee

biochars, statistical analysis shows that these were not significantly different.

As was the case with bulk density, it is likely that any differences were

obscured by the high variability of measurements for field soils.

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Soil

0 kPa 10 kpa 100 kpa 1500 kpa

Mean Variance *N P Value

Mean Variance *N P Value Mean Variance *N P Value Mean Variance *N P Value

60 t/ha MB

60 t/ha WSB

0.476

0.480

0.000395

0.001606

6 6

n.s** 0.285

0.291

0.003016

0.005134

6 5

n.s** 0.0813

0.0850

3.09E-5

2.35E-5

5

6

n.s** 0.0725

0.0690

7.56E-5

3.43E-5

6

6

n.s**

100 t/ha MB

100 t/ha WSB

0.419

0.462

0.000168

0.002547

6 4

n.s** 0.261

0.315

0.00174

0.00429

4 4

n.s** 0.0830

0.0910

9.33E-5

2.01E-5

6

4

n.s** 0.0703

0.0753

3.93E-5

0.000126

5

4

n.s**

Table 4-11 Means and variances of volumetric water content (m3of H2O/ m3 soil) for mallee biochars (MB) and wheat straw biochars (WSB) at 0, 10, 10 and 1500 kPa matric potentials and P-values between treatments at 60 t/ha and 100 t/ha. * N is the number of measurements, ** n.s = not significant

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4.2.4 Discussion

Biochar did not systematically change the AWC of soils with high water holding

capacities at Wollongbar and Maclean’s Ridges. Therefore, if considerable

biochar is added for a purpose other than improving soil water content, there

will be no negative effect on water holding capacity.

The estimated field capacity based on biochar and soil properties did not

predict the measured field capacity for all treatments. This indicates that the

simple, linear model used to predict field capacity is inadequate. Non-linear

relationships between biochar additions and field capacity for sandy soils were

also reported by Kinney et al. (2012) and Abel et al. (2013). Abel et al. (2013)

found that lower amounts of biochar (1% by weight) offered similar

improvements in available water capacity (AWC) to larger additions (up to 5%

by weight) for some soil and biochar combinations. The predicted results were

also all greater than the measured results in a study by Kinney et al. (2012) that

predicted field capacities, based on mass balance calculations, for soils with

various amounts of added biochar. These authors considered that the higher

than expected predicted results might be due to an overestimation in the water

holding capacity of the biochar-only samples. Without any soil to break up the

individual biochar particles, extra water can be held between biochar particles

due to combination of capillary forces and/or attraction of water to the surface of

biochar (Kinney et al., 2012). These published results suggest there may be an

upper limit to the improvement in AWC for some soil and biochar combinations.

The absence of systematic relationships between amounts of added biochar

and AWC found in the present research and the similar results of Kinney et al.

(2012) and Abel et al. (2013) indicate that there are factors affecting AWC apart

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from the quantity of biochar added and its pore size distribution. A possible

explanation may be that as the amount of biochar is increased, the soil

becomes more loosely packed, which in turn would decrease the water holding

capacity of the soil; this might be only partly offset by the higher water holding

capacity of the biochar particles.

These potential explanations based on the fabric of soil/biochar mixtures are

considered further using scanning electron microscopy and EDS analysis in the

following chapter.

4.3 Aggregate Distribution, Stability and Resilience

The addition of biochar to soils has been shown to affect some physical

characteristics of soils, such as bulk density and water holding capacity (Abel et

al., 2013; Busscher et al., 2010; Kinney et al., 2012; Laird et al., 2009; Novak,

Busscher, et al., 2009; Tryon, 1948). There is not, however, any available

literature about impact of biochar addition on soil aggregates, which contain

many of the smaller pores in the soil that are essential for storing water, air,

nutrients and microbes. The greater the stability and resilience of these

aggregates, the better they can withstand natural forces such as pressure, rain,

wind, thawing and freezing.

Soil samples were taken from established biochar field experiments where

aggregation could be expected to have occurred and were examined for

changes in soil aggregate distribution and stability.

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4.3.1 Results

4.3.1.1 Measured change in soil characteristics

The percentage of water stable aggregates (WSA) may be calculated using

equation 4 below (Seybold & Herrick, 2001).

[4]

Where, = the weight of the dry aggregates plus the sieve

= weight of the dry sand plus the sieve

= weight of the dry soil sample plus sieve

Calculations based on the difference between two larger numbers require

significant care in measurement. Small variations in the measured aggregate or

soil weight can result in larger inaccuracies in the percentage of water stable

aggregates.

Figure 4-6 shows the percentage of WSA for a number of treatments on trials in

sandy soils in W.A. The results show significant variation between samples

taken from the same treatment. There was a general upward trend in the mean

percentage of WSA with increasing biochar additions, which was statistically

significant for the 60 and 100t/ha treatments.

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Figure 4-6 Percentage of water stable aggregates for the RBE control and treatments for 10, 20, 60 and 100t/ha mallee biochar (MB) treatments and 60 and 100 t/ha wheat straw biochar (WSB) treatments and their means.

4.3.1.2 Impact of soil type

The control samples from Wollongbar and Maclean’s Ridges field trials showed

that the percentage of WSA was high (90%). The superior aggregate stability of

the red ferrosols is due to the organisation of clay and iron oxides, which

creates stable aggregates, which are more resistant to impacts and dispersion

during the wet sieving process. The addition of biochar to these soils would not

be expected to modify aggregate stability. The results in Figure 4-7 and Table

4.12 show that treatment of the red ferrosol soils with biochar may have actually

reduced the percentage of water stable aggregates, although the differences

are not statistically significant.

The control samples from the sandy soil of the RBE site had a mean

percentage of WSA of 50 percent, a much lower value than for the red ferrosols

but not unexpected given the high sand content of these soils. The lower levels

of WSA in RBE soils meant that there was more opportunity for improvement by

20

30

40

50

60

70

80

0 10 20 30 40 50 60 70 80 90 100

wa

ter

sta

ble

ag

gre

ga

tes

(%)

Biochar Additions (t/ha)

control

MB

WSB

mean for MB

mean for WSB

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addition of biochar. Figure 4-6 indicates an increase in the mean percentage of

WSA with increasing biochar addition.

Figure 4-7 Comparison of the percentage of water stable aggregates between the Wollongbar and Maclean’s Ridges s and RBE biochar experiments (mallee and wheat straw biochar).

Soil Mean WSA (%)

Variance *N P Value

Wollongbar

Control

10 t/ha

89.70

87.72

0.33

7.55

4

5

n.s**

MacLean’s Ridges

Control

60t/ha

89.02

88.37

5.19

3.65

5

6

n.s**

Table 4-12 Comparisons of water stable aggregates (WSA) (%) means and variances, including P-values between the controls for Wollongbar and Maclean’s Ridges treatments. *N is the number of measurements **n.s = not significant

20

30

40

50

60

70

80

90

100

0 10 20 30 40 50 60 70 80 90 100

wat

er s

tab

le a

ggre

gate

s (%

)

Biochar Additions (t/ha)

Wollongbar trial

Maclean's Ridges trial

mallee biochar

wheat straw biochar

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4.3.1.3 Impact of treatment level

The RBE trial shows a rise in the mean percentage of WSA with increasing

biochar addition (Table 4-13). However the values were only significantly

different from the control for the 60 and 100t/ha wheat straw biochar and

100t/ha mallee biochar, when the mean percentage WSA increased by over

18.6 percent compared to the control. The lack of significant differences at

lower treatment levels may be due to large variances in the measurements.

Soil Mean

WSA (%)

Variance *N P Value % difference

in mean from

control

Control 49.96 89.86 13 0

10 t/ha MB 55.40 176.4 6 n.s 10.9

20 t/ha MB 54.35 111.89 6 n.s 8.8

60 t/ha WSB 59.25 56.83 12 <0.05 18.6

60 t/ha MB 57.84 50.56 6 n.s 15.8

100 t/ha WSB 63.24 8.43 6 <0.01 26.6

100 t/ha MB 61.18 100.66 8 <0.05 22.5

Table 4-13 Comparisons of water stable aggregates WSA % values (means and variances), including P-values between the control for RBE and treatments for 10, 20, 60 and 100t/ha mallee biochar (MB) treatments and 60 and 100 t/ha wheat straw biochar (WSB) treatments. *N is the number of measurements **n.s = not significant

4.3.1.4 Impact of biochar type

There were no significant differences in the percentages of water stable

aggregates between the mallee and wheat straw biochar treatments (Table 4-

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14). The higher variance for the 100t/ha mallee biochar is due to the two outliers

that can be clearly seen in Figure 4-6 above.

Soil Mean WSA (%)

Variance *N P Value

60t/ha

WSB

MB

59.25

57.84

56.83

50.56

12

6

n.s**

100t/ha

WSB

MB

63.24

61.18

8.44

100.66

6

8

n.s**

Table 4-14 Comparisons of water stable aggregates (%) means and variances, including P-values between the RBE treatments for wheat straw biochar (WSB) and mallee biochar at 60t/ha and 100t/ha. *N is the number of measurements **n.s = not significant

4.3.2 Discussion

The results from the RBE site showed significant differences in the percentage

of water stable aggregates between the control and treatments with 60 t/ha or

more of biochar for wheat straw biochar and 100t/ha for mallee biochar. The

large variances may have obscured any differences for the treatments below

60t/ha, and were due to the high sand and low clay content of the RBE soils,

which create weak aggregates that can be easily disrupted by the

measurement technique.

The increase in the percentage of water stable aggregates in RBE soil with

large (greater than 60t/ha) biochar additions indicates that biochar additions can

improve the percentage of WSA in some soils. The mechanisms involved in the

improved aggregation of the RBE soils with biochar may include:

An increase in fungal hyphae and microbes that produce exudates that can bind soil particles together (Pietikainen et al., 2000);

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biochar particles and soil minerals forming organo-mineral complexes (Hammes & Schmidt, 2009).

These potential explanations will be further examined using a scanning electron

microscope and EDS analysis in the following chapter.

4.3.3 Hand-held Sieve Compared to Automated Yoder Sieve

Table 4-15 gives a comparison of the water stable aggregate measurements

from the hand-held sieve and the automated Yoder equipment, which is more

commonly used in soil laboratories. Samples from the control and the 100 t/ha

mallee biochar treatment were used to assess any differences in results

between the two methods. The results showed no significant difference

between the means, indicating that the hand-held sieve gives comparable

results to the automated Yoder sieve.

Soil Mean Variance *N P Value

Control Yoder

Control hand-held

56.99

49.96

162.6

89.86

4

11

n.s**

100t/ha Yoder

100t/ha hand-

held

68.86

61.18

41.54

100.7

4

13

n.s**

Table 4-15 Comparisons of water stable aggregates (%) means and variances, including P-values measured using the hand-held sieve and automated Yoder sieve. *N is the number of measurements **n.s = not significant

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4.4 Penetrometer Measurements

Penetrometer resistance measurements are shown in Figure 4-8 and indicate a

large scatter of readings for penetrometer resistance with no obvious trend with

treatment.

Figure 4-8 Penetrometer resistance for 0, 60 and 100 t/ha mallee and wheat straw biochar treatments at Rainbow Bee Eater biochar site

The absence of any clear trend is confirmed in Table 4-16 below, which shows

there were no statistically significant differences between the control and the

treatments for both 60 or 100 t/ha of biochar addition. The high variability and

lack of any systematic trend may be due to the penetrometer coming into

contact with many stones that were present in the soil, as well as decaying

roots and small tunnels created by soil fauna.

0

500

1000

1500

2000

2500

3000

3500

4000

4500

0 20 40 60 80 100 120

Pe

ne

tro

me

ter

Re

sist

ance

(K

pa)

Biochar Added (t/ha)

Penetrometer Resistance V's Biochar Additions

measurement

average

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Soil Mean Resistance

(kPa)

Variance N* P Value

Control

60 t/ha

1988

1267

1171875

1051667

12

24

n.s**

p=0.06

Control

100 t/ha

1988

1400

1171875

700870

12

24

n.s**

p=0.08

Table 4-16 Comparison of penetrometers resistance means and variances, including the P-values between treatments and the control at Rainbow Bee Eater Biochar SEM

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5 EVIDENCE OF MECHANISMS THAT MODIFIED SOIL

CHARACTERISTICS DUE TO BIOCHAR ADDITIONS

This chapter examines whether the SEM and EDS results can provide

information on the processes that caused changes in bulk density, water

holding capacity, and the water stable aggregates in the RBE soils when

biochar was added (Chapter 4).

5.1 Bulk Density

The possible explanations given in Section 4.1 for the larger than expected

reductions in bulk density for the 60 and 100t/ha treatments were that the

biochar particles have largely remained separated from the soil particles, and

due to their sizes and shapes the soil and biochar particles have not formed a

homogeneous soil/biochar mixture and any consolidation/packing has been

minimal.

A second possibility is that biological processes were occurring in the soils

containing biochar that increased soil aggregation due to bonding by abundant

soil fungal hyphae or other soil microbes.

The SEM images in section 5.4 below and in Chapter 6 shows single biochar

particles or soil/biochar aggregates and cannot convey the mixing or packing of

the soil/biochar mixtures under extensive field conditions. The images do

however provide evidence that at least some of the biochar has been

incorporated into soil aggregates and that abundant fungal hyphae exist within

these aggregates. Fungi may have proliferated in response to the beneficial

chemical properties and fine porosity of biochar. The biochar particles (Figure 5-

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1 and 5-2) in the soil aggregates may have created large, stable pore spaces

both within and between aggregates.

5.2 SEM Observations in Relation to Soil Water Retention

The results in Section 4.2 showed that the volumetric soil water content did not

increase linearly with biochar addition. The possible explanation given for these

results was that as the amount of biochar is increased, the soil becomes more

loosely packed, which in turn would decrease the water holding capacity of the

soil; this would be to some extent be offset by the higher water holding capacity

of the biochar particles.

The SEM results cannot measure soil packing or observe the space between

aggregates, but as with bulk density the presence of biochar particles (Figure 5-

1 and 5-2) in the aggregates may have created larger pore spaces both within

and between aggregates. Some of these larger pore spaces might not be able

to hold the water against drainage due to gravity and hence the lower than

expected increase in soil water content.

5.3 Morphology and Water Stable Aggregates

The results from Section 4.3 showed significant increases in water stable

aggregates (WSA) for treatments with at least 60t/ha of biochar. Possible

reasons for these increases are:

Increases in the abundance of ramifying fungal hyphae and microbes

that produce exudates that can bind soil particles together (Pietikainen et

al., 2000);this is evident in SEM micrographs.

Biochar particles and soil minerals forming organo-mineral complexes

(Hammes & Schmidt, 2009).These are also evident in SEM micrographs.

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The different amounts of fungi and microbes between the control and the

various biochar treatments cannot be quantified from SEM images. Some of the

images (Figures 5-1, 5-3) show fungal hyphae existed in much larger numbers

around aggregates containing biochar particles.

The SEM images combined with EDS data have identified kaolin and iron

oxides assemblages on the surface of biochar particles indicating the presence

of biochar-mineral complexes.

5.4 SEM Images of Soil Aggregates with Biochar

SEM images of soil aggregates containing biochar fragments are shown in

Figures 5-1 to 5-3.

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Figure 5-1 Top image: soil aggregate from the mallee biochar 100 t/ha treatment (backscatter electron image). Bottom image: an enlargement of the biochar particle outlined in the red box showing many fungal hyphae.

Biochar particle

Root or fungal growth?

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Figure 5-2 Top images: soil aggregate from 60t/ha mallee biochar Bottom images: enlargement of the biochar particle in the aggregate outlined in the red box. Secondary electron images (left).

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Figure 5-3 Soil aggregate from mallee biochar 60 t/ha treatment (secondary electron image) abundant hyphae.

5.5 Discussion

The SEM images in section 5.4 and Chapter 6 indicate that the explanations

given for the changes in soil structure and soil stability are plausible. The

images provide evidence of biochar particles becoming attached to soil particles

and forming aggregates in the soil. They also show the presence of abundant

fungal hyphae in the soil-biochar aggregates.

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6 SCANNING ELECTRON MICROSCOPY (SEM) AND

ENERGY-DISPERSIVE SPECTROSCOPY (EDS) OF

BIOCHAR IN SOIL

The impact of biochar on soil characteristics is related to both its physical and

chemical composition. Detailed investigation into biochar and associated soil

were performed using Scanning Electron Microscopy (SEM) and associated

Energy Dispersive Spectroscopy (EDS).

Biochar taken from the RBE field trials was used to identify any change in the

morphology of the biochar particles. Further analysis was then performed on

soil samples taken from biochar field trials to examine whether the biochar had

been incorporated into soil aggregates and whether there were fungi present in

these aggregates. EDS analysis was used to identify possible clay and other

minerals adhering to the biochar and associations with other soil particles. EDS

was also used to identify minerals present within biochar, including those

formed during pyrolysis, some of which contain plant nutrient elements.

6.1 Morphological Characteristics of Biochar Particles and the

Composition of Associated Mineral Particles

This section contains SEM images (section 6.1.4) of biochar and the EDS data

for mineral particles adhering to the surface of biochar grains and within grains.

There is a discussion of the results.

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6.1.1 Biochar Pore Structure

The morphological and chemical characteristics of biochar reflect source

materials and pyrolysis conditions (Downie et al., 2009). The size and number

of pores in biochar would be expected to determine the water holding capacity

of biochar and soil/biochar mixtures such as those from the field trials

investigated in this research. The SEM images in Figures 6-1 through to 6-18

shows the detailed pore structures of biochar samples taken from field trials.

They show pore sizes ranging from less than 1 micron to tens of microns. SEM

is unable to image the abundant nanopores present in biochar.

The images show that the pore structure of the plant material from which the

biochar was created has largely remained intact. There was no evidence in the

SEM images (Figures 6-1 to 6-5 for external images and 6-6 to 6-18 for internal

images) of any substantial amount of collapsed pores. However there was

evidence of a reduction in pore diameters due to soil particles becoming lodged

within the pores (Figures 6-1, 6-2, 6-4, 6-19 and 6-20), which could reduce the

effective pore volume, by blocking access to inner pores (Hammes & Schmidt,

2009).

6.1.2 Unusual Structures

There are distinct features on both the exterior and interior surfaces of the

biochar. In Figure 6-1 at sp1 and sp2, the SEM image shows possible fungal

hyphae. There are distinct inorganic materials in biochar as shown in Figure 6-

15, together with enlarged images and EDS analyses of some of these

materials in Figures 6-16 and 6-17, indicating that they are calcite, clay, and

apatite.

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6.1.3 Deposits on Biochar

The EDS data in the diagrams and tables in section 6.1.1, Figures 6-1 to 6-18,

reveal a variety of inorganic materials on both the exterior and interior surfaces

of biochar particles.

6.1.3.1 Biochar surface deposits

In the soil, biochar undergoes surface oxidation and interacts with soil particles

(Joseph et al., 2010; Lin et al., 2012). The interactions are complex and involve

both soil organic matter and soil minerals (Joseph et al., 2010). The surface

deposits examined in this section refer to mineral particles visible under the

SEM on the external surface of biochar fragments.

Materials dominated by aluminium and silica are likely to be clay minerals

derived from the soil and are present in the following Figures: 6-1 (sp1, sp3,

sp4); 6-2 (sp1, sp3, sp7); 6-3 (sp1); 6-4 (sp1, sp2, sp3, sp4). The specific type

of clay mineral can be determined from the ratio of silica to aluminium along

with the presence of other elements (K, Ca, Mg) (Purdie, 1998), however

spectral interference from nearby mineral grains can make this assessment

difficult. Clay minerals have been detected on the external surfaces of biochar

fragments in previous studies (Joseph et al., 2010; Lin et al., 2012).

The EDS analyses also show the presence of titanium in Figure 6-9 (sp6).

Titanium occurs in small amounts in most West Australian soils, mostly in the

form of microcrystalline anatase (TiO2) (Purdie, 1998).

All the images of deposits on the external surface of the biochar fragments

correspond to EDS data showing that the deposits contain iron (Figures 6-1 to

6-5). The iron is likely to be in iron oxides, possibly derived from breakdown of

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the ironstone gravel, found at the trial site. There are moderate amounts of iron

oxides in the clay fraction of most West Australian soils (Purdie, 1998).

EDS data in Figure 6-5 indicate that the particle at sp1 is an aluminium oxide or

hydroxide. West Australian soils contain oxyhydroxide and hydroxide minerals

of aluminium: mostly boehmite and gibbsite (Purdie, 1998).

The above images and associated EDS analysis a show diverse range of

minerals are attached to the biochar fragments. These attached particles can

provide physical protection of the biochar and increase its stability (Brodowski et

al., 2006).

6.1.3.2 Biochar Internal deposits

During the pyrolysis process, many elements are retained in the biochar grains

as crystalline minerals. Several biochar particles taken from field trials were

sliced open with a scalpel to expose the interior surfaces and subjected to

SEM/EDS analysis.

Images and data in Figures 6-6 to 6-18 are of the internal surface of a biochar

particle. The EDS analysis showed that deposits in Figures 6-6 (sp3, sp5), 6-10

(sp1), 6-11 (sp1) and 6-17 (sp1) were dominated by calcium and phosphorus,

which is likely to be some type of calcium phosphate, possibly hydroxyapatite,

which is known to occur in biochar (Amonette & Joseph, 2009). The deposits

in Figures 6-10 (sp2), 6-11 (sp2) and 6-14 (sp1) indicate high amounts of

calcium and no other major element. This suggests the presence of either

calcite that formed during the pyrolysis process or subsequently by

carbonation of CaO (Amonette & Joseph, 2009).

The EDS analyses reveals a significant amount of magnesium in Figures 6-6

(sp3, sp5); 6-9 (sp1); and 6-15 (sp2); mainly in association with calcium and

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phosphorous as well as a small amount of sulphur. Alternatively, in the case of

Figure 6-11 (sp2), the EDS analysis indicates only magnesium and calcium are

present. These mineral materials are possibly a mix of magnesium salts, such

as magnesium sulphate, magnesium carbonate, and magnesium phosphate.

The minerals were likely derived from elements in the original biomass material,

the amount of magnesium oxide in the ash of mallee and wheat straw biochars

was 4.8 and 2.5 percent, respectively (Table 4-3).

There is evidence of small amounts of titanium in the interior of the biochar in

Figures 6-6 (sp2) and 6-9 (sp2). Previous studies have also confirmed the

presence of titanium in biochars and this probably represents fine particles of

anatase from the soil (Amonette & Joseph, 2009; Prakongkep et al., in press)

There are several images with EDS data that indicated the presence of clay-like

minerals. The Figures 6-6 (sp1, sp2, sp4); 6-7 (sp1, sp2); 6-9 (sp2); 6-13 (sp1);

6-14 (sp2); 6-15 (sp1, sp3, sp4) all exhibit EDS data indicating major amounts

of aluminium and silica as would be anticipated for clay minerals. In most cases,

it appears that the clay was illuviated and deposited into the internal biochar

pores from the surrounding soil. However Lin et al. (2012) collected EDS

spectra from fresh paper sludge biochar that showed similar ratios of Al and Si,

suggesting that some(little) of these clay-like minerals may be derived from the

original biochar feedstock, which is also plausible for mallee and wheat straw

biochar given the presence of both silica and aluminium in their ash analyses

(Table 4-3).

6.1.3.3 Discussion

The persistence of minerals such as hydroxyapatite, calcite, and magnesium

salts in the interior of biochar particles recovered from soil indicates that some

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locations within biochar particles were poorly accessible to soil water and

consequently remained unoccupied by soil fauna, fungi, and plant roots.

However, it is apparent that water did manage to penetrate some of the

biochar’s interior as evidenced by the clay minerals on internal surfaces

observed in several images. Unfortunately, no original control samples were

available for SEM examination to enable a comparison of biochar fabric and

mineralogy before and after incubation of biochar in soil.

The outer surface of the biochar and outer pores contain clay minerals and

oxides that are likely to have come from the surrounding soil via illuviation, as is

known to operate in a soil matrix (Brady & Weil, 2008). These crystals were

attached to the biochar particles, which lends support to the hypothesis that the

biochar has become incorporated into the soil structure.

6.1.4 SEM images and EDS Data of Biochar Particles

Figures 6-1 through to 6-4 contains backscatter electron images of wheat straw

biochar and Figures 6-5 through to 6-17 are a combination of backscatter and

secondary electron images of mallee biochar.

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Figure 6-1 External surface mallee biochar from soil with EDS analysis (back scatter electron image- top, secondary electron image- bottom) sp1 ,sp2 sp3 and sp4 indicate the presence of kaolin and iron oxide together with residual calcium carbonate.

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Figure 6-2 Internal and external deposits of kaolin and iron oxide on mallee biochar (back scatter electron image) from soil with EDS analyses indicate various amounts of illuviated clay and iron oxide together with residual calcium carbonate and other salts.

sp1

sp5

sp6

sp8

sp9sp2sp3

sp4

sp7

Atomic % sp1 sp2 sp3 sp4 sp5 sp6 sp7 sp8 sp9

Na 0 0 0 0 0 0 0 0 0

Mg 0 0 0 0 0 0 0 0 0

Al 11.68 4.58 11.98 7.69 7.96 6.21 11.7 9.71 6.96

Si 14.39 24.36 20.97 4.54 3.19 6.18 14.43 5.77 2.45

P 0.3 0.23 0.29 0 0 0.52 0.39 0 0

Si 0.16 0.2 0 0 0 0 0.57 0 0

Cl 0.3 0.37 0 0.42 0 0.24 0.56 0.62 0

K 0.76 0.95 0.27 1.26 2.21 0.76 1.1 1.95 2.58

Ca 3.93 4.57 0.63 13.78 27.18 3.29 4.88 22.76 29.05

Ti 3.6 0.24 0 0 0 16.48 2.64 0 0

Mn 0 0 0 0 0 0 0 0 0

Fe 2.41 1.12 1.64 13.92 3.53 2.46 2.15 3.86 4.92

Cu 0 0 0 0 0 0 0 0 0

Zn 0 0 0 0 0 0 0 0 0

O 62.79 63.8 64.12 58.01 54.81 63.81 62.66 56.24 53.81

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Figure 6-3 Exterior surface mallee biochar (back scatter electron image) from soil with EDS analysis sp1- kaolin, calcite.

Figure 6-4 Mallee biochar exterior surface (back scatter electron image) with soil particles attached to its surface; EDS analyses sp1-kaolin, iron oxide, several S, K, Ca salts; sp2 – clay, potassium salt; sp3,4- mostly kaolin, iron oxide.

Atomic % sp1

Na 0

Mg 0.39

Al 11.41

Si 13.89

P 0.94

S 0.48

Cl 0

K 0.41

Ca 8.39

Ti 0.38

Mn 0.18

Fe 1.76

Cu 0

Zn 0

O 61.48

Atomic % sp1 sp2 sp3 sp4

Na 0 0 0 0

Mg 0 0 0 0

Al 5.34 9.54 8 14.96

Si 5.92 16.73 8.4 17.35

P 3.23 0.41 0 0.5

S 3.34 0.43 0 0.05

Cl 0 0 0 0

K 4.92 7.12 0.87 0.14

Ca 7.49 1.72 0.75 0.37

Ti 0 0.48 1.28 0.32

Mn 0 0 0 0.32

Fe 7.76 3.35 19.95 2.69

Cu 0 0 0 0

Zn 0 0 0 0

O 61.62 60.94 61.94 63.68

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Figure 6-5 External surface of wheat straw biochar (back scatter electron image) from soil with EDS analyses sp1 – aluminium oxide[gibbsite], sp2 – potassium, phosphorus and other elements indicating a mixture of minerals.

Figure 6-6 Internal surface of mallee biochar (back scatter electron image) from soil with EDS analyses sp1, 2, 4 –mostly illuviated kaolin and iron oxide; sp 3, 5 – apatite, Mg, Ca, S salts;

Atomic % sp1 sp2 sp3 sp4 sp5

Na 0 0 0 0 0

Mg 0 0 11.13 0 8.32

Al 11.89 5.41 0 11.29 0

Si 16.72 15.13 0 14.96 1.86

P 0.64 0 10.53 0.28 10.56

S 0.18 0 2.76 0.23 3.55

Cl 0 0 0 0 0

K 0.75 0.8 0 0.52 0

Ca 0 0 9.8 1.07 10.99

Ti 0.65 1.22 0.11 0.72 0

Mn 0 0 0 0 0

Fe 3.95 12.92 0 7.57 0

Cu 0 0.83 0 0 0

Zn 0 0 0 0 0

O 63.25 62.83 59.54 62.93 62.21

Atomic % sp1 sp2

Na 0 0

Mg 0 2.41

Al 38.4 3.63

Si 0.23 1.64

P 0 14.05

S 0.05 1.64

Cl 0 1.71

K 0 7.09

Ca 0 2.5

Ti 0 0

Mn 0 0

Fe 0.38 0

Cu 1.9 0

Zn 0 0

O 59.98 61.41

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Figure 6-7 Internal surface of wheat straw biochar particle with EDS analysis (backscatter electron image). Particles giving sp1 and sp2 are mostly composed of approximately equal amounts of Al and Si and may be mostly kaolin that has been illuviated into the biochar grain.

Figure 6-8 Internal wheat straw biochar (backscatter electron image) with EDS analysis- particles generating sp1 and sp2 are Fe and Cu/Zn rich, possibly reflecting contaminants.

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Figure 6-9 Internal wheat straw biochar (backscatter electron image) from soil with EDS analyses. Sp1- Ca, Mg carbonates, sulphates, sylvite; Sp2- kaolin, anatase, sylvite, gypsum and possible Cu/Zn (brass) contamination.

Figure 6-10 Internal surface of mallee biochar (backscatter electron image) from soil with EDS analysis sp1 –apatite, sp2-calcite.

0 5 10 15 20Energy (keV)

0

10

20

30

40

cps

NaMg

AlP

S

Ca

Mn

0 5 10 15 20Energy (keV)

0

20

40

60

80

cps

MgSi

PP

Ca

CaMn

sp2 Atomic % sp1 sp2

Na 0 0

Mg 1.72 5.8

Al 0 0

Si 0 0

P 12.38 0

S 0.54 0

Cl 0 0

K 0 0.34

Ca 24.99 42.9

Ti 0 0

Mn 1.31 2.16

Fe 0 0

Cu 0 0

Zn 0 0

O 60.07 50.39

sp1

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Figure 6-11 Internal surface of mallee biochar (backscatter electron image) from soil with EDS analysis. Sp1 –apatite; sp2-calcite.

Figure 6-12 Enlargement from above image of apatite particle producing sp1.

Atomic % sp1 sp2

Na 0 0

Mg 1.81 9.7

Al 0.29 0

Si 0 0.15

P 12.69 0

S 0.26 0

Cl 0 0

K 0 0

Ca 23.77 38.94

Ti 0 0

Mn 0.88 1.25

Fe 0 0

Cu 0 0

Zn 0 0

O 59.87 50.38

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Figure 6-13 Internal surface mallee biochar (backscatter electron image) from soil with EDS analysis. Sp1 - kaolin crystals deposited from soil solution or suspension on pore walls.

Figure 6-14 Internal surface of mallee biochar (backscatter electron image) from soil with EDS analyses. sp1 - calcite; sp2 – illuviated kaolin and iron oxide.

0 5 10 15 20Energy (keV)

0

20

40

60

cps

Mg

AlSi

PS

KCaCa

Fe

Atomic % sp1

Na 0

Mg 0

Al 14.12

Si 17.61

P 0.6

S 0.71

Cl 0

K 0.63

Ca 1.44

Ti 0

Mn 0

Fe 1.82

Cu 0

Zn 0

O 64.15

Atomic % sp1 sp2

Na 0 0

Mg 0 0

Al 0 11.23

Si 0 20.6

P 0 0.22

S 0 0

Cl 0.15 0

K 0.52 0.35

Ca 48.96 0.61

Ti 0 0.59

Mn 0 0

Fe 0 2.48

Cu 0 0

Zn 0 0

O 50.09 64.18

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Figure 6-15 Internal surface of mallee biochar (backscatter electron image) from soil with EDS analyses sp1 – kaolin, apatite; sp2 – Mg, Ca phosphates and carbonates; sp3, sp4 - as for sp2 plus kaolin.

Figure 6-16 Enlargement of sp1 above Figure 6-17 Enlargement of sp3 and sp4. above.

Atomic % sp1 sp2 sp3 sp4

Na 0 0 0 0

Mg 1.52 10.78 4.3 3.48

Al 5.65 0 4.11 5.53

Si 7.07 1.35 4.94 6.33

P 7.42 11.18 11.03 9.76

S 0.52 4.71 0.82 0.57

Cl 0 0 0 0

K 0.78 0 1.59 0.82

Ca 13.74 8.41 8.87 10

Ti 0.21 0 0.28 0.21

Mn 0.23 0 0 0

Fe 1.41 0 0.62 0.67

Cu 0 0 0 0

Zn 0 0 0 0

O 61.26 64.4 62.48 62.46

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Figure 6-18 Internal surface of mallee biochar (backscatter electron image) from soil with EDS analysis. sp1 –apatite.

6.2 Soil and Biochar Aggregates

This section examines SEM images (section 6.2.4) of soil aggregates

containing biochar particles

6.2.1 Fungal Growth

Figure 6-19 shows a soil aggregate containing soil, biochar and long, fine

filaments of fungal hyphae. These fungal hyphae resemble the SEM images of

arbuscular mycorrhiza fungal hyphae shown in Lehmann et al. (2011); Luo et al.

(2013); Thies and Rillig (2009).

Figure 6-20 is an image of part of a soil aggregate from the mallee 60 t/ha

treatment. The biochar particle is in the background whilst the foreground

shows soil particles and abundant arbuscular mycorrhiza fungal hyphae. Figure

6-21 shows a piece of mallee biochar extending out of an aggregate, with

strands of hyphae extending from its surface.

Atomic % sp1

Na 1.03

Mg 2

Al 0.27

Si 0

P 15.21

S 0.3

Cl 0.16

K 0.09

Ca 19.28

Ti 0

Mn 0.22

Fe 0

Cu 0

Zn 0

O 61.36

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6.2.2 Interaction with Soil Particles

Figures 6-19 and 6-20 show soil particles imbedded inside the pores of the

biochar as well as being present on its surface. These two figures also show

that while some of the biochar may be contained within a soil aggregate, some

of it may protrude, giving the aggregate an unusual shape.

6.2.3 Discussion

The above images indicate that at least some of the added biochar has become

integrated into soil aggregates with soil particles surrounding biochar pieces.

The images show that some micron-sized particles of kaolin and iron oxides

have attached themselves to the internal and external surfaces of the biochar.

The images also show fungal hyphae in association with biochar and other soil

particles, these biological materials may be providing cohesion to the soil

aggregate.

6.2.4 SEM images of Soil Aggregates with Biochar

SEM images of soil aggregates containing biochar fragments are shown in

Figures 6-19 to 6-22.

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Figure 6-19 Top image: soil aggregate from the mallee biochar 100 t/ha treatment (backscatter electron image). Bottom image: an enlargement of the biochar particle outlined in the red box showing many fungal hyphae

Biochar particle

Root or fungal growth?

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Figure 6-20 Top images: soil aggregate from 60t/ha mallee biochar Bottom images: enlargement of the biochar particle in the aggregate outlined in the red box. Secondary electron images (left)

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Figure 6-21 Soil aggregate from mallee biochar 60 t/ha treatment (secondary electron image) abundant hyphae

.

Figure 6-22 Mallee biochar in a soil aggregate (secondary electron image) many fungal hyphae are present

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6.3 Discussion

The images show that the biochar fragments have largely retained an

uncrushed pore structure, consistent with freshly made biochar. Furthermore,

several acid-soluble minerals, including calcite and apatite, were in the interior

of biochar fragments that were removed from soil. They appear to have been

protected against dissolution despite biochar being in the acid soil for several

years. This is a significant finding and has not been reported in any previous

papers. Conversely, there was also evidence that clay, and possibly anatase,

were illuviated and deposited into the internal biochar pores from the

surrounding soil. While other authors (Joseph et al., 2010; Lin et al., 2012),

have detected clay particles on the surface of biochar taken from the soil, none

have reported on the presence of soil minerals inside biochar fragments that

have been in soil.

Further research would be required to determine which of these explanations

adequately describe the observed changes.

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7 CONCLUSIONS

This thesis investigated the effects of biochar additions on two contrasting soils.

Soil sampling and analysis was conducted on three established field trials to

test whether biochar additions could alter characteristics of the soil structure

that are commonly associated with improved productivity

The first soil type was a poorly structured sandy earth in the wheat belt of

Western Australia where Rainbow Bee Eater Pty Ltd (RBE) had three-year-old

field experiments with applications of two biochars. It was predicted that for this

soil type the addition of biochar would increase the soil water holding capacity

and improve soil structured by lowering the bulk density and increasing

aggregate stability.

The second soil type was a well-structured ferrosol from Northern New South

Wales. The New South Wales Department of Primary Industries had

established field experiments with biochar treatments at two sites: the

Wollongbar Agricultural Research Centre and Maclean’s Ridges Macadamia

farm. The primary aims of these experiments were to test biochar’s carbon

sequestration potential and whether it affects nitrogen cycling, plant productivity

and fertiliser management. The structure of this soil type was already good and

unlikely to be improved by biochar additions.

In the three months after the addition of biochar to RBE soils, the pH, soil

carbon, K, P, and S increased in treatments with biochar additions compared to

the control. Despite these modest improvements, there were no statistically

significant increases in wheat yield in the first year for any treatment compared

to the control.

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The results for the RBE poorly structured sandy soil showed that additions of

60t/ha or greater of biochar produced a statistically significant improvement in

both water holding and bulk density. The longer-term effects of these

improvements on plant production is not clear since the plant yields have not

been measured since the initial harvest quite shortly after the biochar was

added to the soil.

There were no significant improvements in structure from biochar additions to

the well-structured ferrosols.

In addition to measuring soil physical and structural characteristics, scanning

electron microscope (SEM) and energy dispersive spectroscopy (EDS) were

used to ascertain whether the biochar particles had become integrated into the

soil structure. Soil aggregates were examined as well as individual biochar

particles removed from the soil. The EDS analysis showed evidence of clay

minerals on the exterior surface of biochar indicating the possible formation of

biochar-mineral complexes. SEM images showed evidence of abundant fungal

hyphae attached to soil aggregates containing biochar particles, possibly

creating more stable aggregates. These SEM images indicate that the

explanations given for the changes in soil structure and soil stability are

plausible.

The interior surfaces of biochar particles were also examined using SEM and

EDS. Some internal surfaces of the particles appear to have clay and possibly

anatase deposits, which were illuviated and deposited into the internal biochar

pores from the surrounding soil. Other internal sections of biochar particles

contained minerals such as, calcite and apatite, which appear to have been

protected against dissolution despite being in the acid soil for several years.

These findings indicate that not all of the internal pore spaces of the biochar can

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be accessed by water, plants, and microbes.

7.1 Summary of Results

7.1.1 Bulk Density

Soil samples from the RBE field trials showed a statistically significant decrease

in bulk density for biochar treatments of over 60 t/ha. Values of bulk density

showed high variability but there was a systematic decrease for treatments with

60 and 100 t/ha of both mallee and wheat straw biochars.

These results align with a simple mixing model. There was no measureable

difference in soil bulk density between mallee and wheat straw biochar

treatments

There was no significant change in the already low bulk density of the ferrosol

with biochar addition at the Wollongbar and Maclean’s Ridges sites.

7.1.2 Volumetric Soil Water Content

The samples taken from the RBE site indicated that the water holding capacity

of the soil was increased by biochar additions. At field capacity, all the

treatments had water contents significantly larger than for the control. However,

at 1500 kPa none of the treatments were significantly different.

The measured increases in water retention were less than that predicted by a

simple mixing model based on the difference between the soil water holding

capacity and the biochar water holding capacity. The more biochar that was

added to the soil, the greater the overestimation of the theoretical field capacity

compared to the measured mean value. Unlike for bulk density, there is not a

simple linear relationship between biochar addition and measured field capacity

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One plausible explanation is the soil becoming more loosely packed as the

amount of biochar is increased. As the soil becomes more loosely packed there

is a subsequent decrease the water holding capacity of the soil; this would be to

some extent be offset by the higher water holding capacity of the biochar

particles

There were no significant changes in water retention for the ferrosol soils at

Wollongbar and Maclean’ Ridges sites

The results indicate that the plant available water capacity (AWC) of the RBE

soil peaks at 60t/ha for both wheat straw and mallee biochars. There does not

appear to be any advantage in increasing biochar application rates beyond 60

t/ha for increasing water-holding capacity.

7.1.3 Aggregate Distribution, Stability and Resilience

The results from the RBE site showed significant differences in the percentage

of water stable aggregates between the control and treatments with 60 t/ha or

more of biochar for wheat straw biochar and 100t/ha for mallee biochar. The

large variances may have obscured any differences for the application rates

below 60 t/ha. In so far as there is a beneficial effect of biochar on the high sand

and low clay content of the RBE soils to strengthen weak aggregates, this can

be disrupted by the measurement technique.

The increase in the percentage of water stable aggregates in RBE soil with

large (greater than 60t/ha) biochar additions indicates that biochar additions can

improve the percentage of WSA in some soils. The mechanisms involved in the

improved aggregation of the RBE soils with biochar may include:

An increase in fungal hyphae and microbes that produce exudates that can bind soil particles together (Pietikainen et al., 2000);

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biochar particles and soil minerals forming stable complexes (Hammes & Schmidt, 2009).

Differences in the amounts of fungi and microbes between the control and the

various biochar treatments cannot be quantified from SEM images. However,

the images (Figures 5-1, 5-3) do show that fungal hyphae existed in large

numbers around aggregates containing biochar particles.

The SEM images combined with EDS data have identified kaolin and iron

oxides assemblages on the surface of biochar particles possibly indicating the

presence of biochar-mineral complexes.

The control samples from Wollongbar and Maclean’s Ridges sites showed that

the original percentage of WSA was high (90%). The superior aggregate

stability of the red ferrosol was due to the organisation of clay and iron oxides,

which creates stable aggregates that resist impacts and dispersion during the

wet sieving process. The results indicate that treatment of the red ferrosol with

biochar does not enhance WSA; in fact, the measured results indicate biochar

additions slightly reduced WSA, although the differences are not statistically

significant.

7.1.4 SEM and EDS Investigations

In additions to the SEM and EDS results mentioned above, the images also

indicate that the biochar fragments have largely retained their original pore

structure. Several minerals, such as calcite and apatite were identified in the

interior of biochar fragments that were removed from soil and it seems that

these minerals have been protected against dissolution despite the biochar

having resided in the acid soil for several years. This is a significant finding and

has not been reported in any previous papers. Conversely, there was also

evidence that clay, and possibly anatase, were illuviated and deposited into the

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internal biochar pores from the surrounding soil. While other authors (Joseph et

al., 2010; Lin et al., 2012), have detected clay particles on the surface of

biochars taken from the soil, none have reported on the minerals being

deposited inside biochar fragments in soil.

7.2 Future Research

Future research is required to elucidate the mechanisms involved in the

observed results, in particular, the practical limits to improving water holding

capacity by addition of biochar.

The SEM and EDS results showed that not all pore spaces were accessible to

water, microbes and plants. Further research is required to understand the

processes involved in nutrient retention and release within biochar particles in

the soil and the amount of pore space accessible to water.

The link between the soil structural changes and crop production also needs to

be further assessed. In the future, wheat yield monitoring at the RBE site may

reveal if added biochar has increased wheat yield.

Future biochar trials that compare alternative soil amendments, such as

compost, gypsum, and biosolids, would allow farmers to make informed

decisions on the best product for yield improvements.

Finally, the results indicate that there are no structural benefits in adding

biochar to already well-structured soils, such as the ferrosols. More information

is required about the types of soils that would most benefit from biochar

additions, along with the best type of biochar for each soil type.

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9 APPENDIX 1

Control

Mallee biochar

Mallee biochar

Wheat straw biochar

Wheat straw biochar

0 10t/ha 60t/ha 10t/ha 60t/ha

Nutrient Depth (cm)

Org C (%) 0-10 0.69 0.75 0.72 0.81 1.03 10-20 0.51 0.53 0.54 0.59 0.56 Total C

(%) 0-10 0.73 0.90 2.11 1.27 4.84 10-20 0.58 0.63 0.68 0.79 0.76 K colwell

(ppm) 0-10 72 100 173 142 487 10-20 53 77 97 85 327 P colwell

ppm 0-10 37 40 45 42 58 10-20 24 21 29 25 28 S

extractable

(ppm) 0-10 17 7 10 20 12 10-20 31 24 26 34 43

Table 1 Soil analyses for selected treatments, for soil sampled three months after the application of biochars (September 2008), for phosphorous, sulphur, organic carbon and total carbon (data from Rainbow Bee Eater Pty. Ltd)