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Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects and Dynamics. Roberto C. Salvarezza SPM and Surface Physical Chemistry Laboratory Instituto de Investigaciones Fisicoquímicas Teóricas y Aplicadas PASI 2006, Bariloche, Argentina

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Page 1: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects and Dynamics.

Roberto C. Salvarezza

SPM and Surface Physical Chemistry LaboratoryInstituto de Investigaciones Fisicoquímicas

Teóricas y Aplicadas

PASI 2006, Bariloche, Argentina

Page 2: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Introduction1) Molecular films in Nanoscience and Nanotechnology

Thiols, silanes and phosphonates on surfaces. 2) Self-Assembly of molecular films on metals and semiconductors. Clean vs oxidized surfaces, gas phase vs liquid phase preparation.

Driving forces for self-assembly3) Thiols on Au(111): the model system

i) Alkanethiols on Au(111) vs sulfur on Au(111)i) Physisorption stageii) Lying down phases

iii) Transient surface structuresiv) Stable phases

v) Adsorption sites: theory vs experiments4) Alkanethiols on Au(111) vs Alkanethiols on Ag(111) and Cu(111).

Surface reconstructions4) Defects at SAMs.

5) SAMs stability: thermal and electrochemical stability6) Dynamics at SAMs

7) From nanoparticles to single crystal faces: curved vs planar surfaces8) Some examples of SAMs applications: Controlling SAM quality

Molecular electronicsCorrosion protection

SAMs as resists for soft lithographySurface active agents

Redox processes at SAMs covered electrodes

Page 3: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Self-assembly is a branch of nanotechnology in whichatoms, molecules, objects, devices, and systems form

structures without external prodding

In self-assembly, the individual components containin themselves enough information to build a templatefor a structure composed of multiple units.

An example is the construction of a monolayer, in which a single layer of closely-packed atoms ormolecules sticks to a surface in an orderly andclosely-packed fashion.

Page 4: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Self-assembled monolayers

Substratesmetals, semiconductors, oxides

Reactive head (linker)

Hydrocabonchain

Terminalgroup

MoleculesThiols, silanes, phosphates

Self-assembly is driven by molecular-substrate, molecular-molecular, molecule-solvent interactions

Page 5: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Self-assembled alkanethiolates on metals (Au,Ag,Cu) are the most popular SAMs.

Self-assembly of alkanethiolates on metals requires oxide-free surfaces

AuS

Page 6: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Self-assembled monolayers of silanes are an alternative for surface chemistry modification and nano/microfabrication

on oxidized or hydroxilated surfaces

Page 7: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

S. Tosatti, R. Michel, M. Textor, N. D. SpencerLangmuir 2002, 18, 3537-3548

Self-assembled phosphate monolayers for surface chemistry modification of oxidized or hydroxilated surfaces

M.l P. Danahy,,M. J. Avaltroni, K.S. Midwood,J. E. Schwarzbauer,J. SchwartzLangmuir 2004, 20, 5333-5337

Page 8: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Love, Estroff, Kriebel, Nuzzo,WhitesidesChemical Reviews, 2005, Vol. 105, No. 4 1121

Page 9: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects
Page 10: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Selective enzimebinding to surfaces

Photoresists

Corrosionprotection

Molecular electronics

Specific applications:

Templatedcrystal growth

Anti-stictionlayers for MEMs

Protection of nanopaticles

Page 11: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Number of publications related to SAMs

Page 12: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Local electronic states, single

molecule conductance

Scanning Tunneling Spectroscopy (STS)

Surface topography, surface structure (periodic and non

periodic)

Atomic Force Microscopy (AFM)

Surface topography, surface structure (periodic and non

periodic)

Scanning Tunneling Microscopy (STM)Microscopic techniques

Techniques for studying self-assembled monolayers of alkanethiols on metal surfaces

Page 13: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

surface structure, composition, H detection

Ion Scattering Spectroscopy (ISS)Time of Flight-Direct Recoil Spectroscopy (TOF-DR)

Symmetry of the cell, atomic distances,

molecular orientation, thermal vibrationalamplitudes (needs

periodicity)

Grazing incidence X-ray diffraction (GIXRD)

Symmetry of the cell, atomic distances,

molecular orientation, thermal vibrationalamplitudes (needs

periodicity)

Low Energy Electron Diffraction (LEED)

adsorption energies and site

Programmed Thermal Desorption (TPD)

Structural parameters. Atomic distances,

molecular orientation, thermal vibrational

amplitudes.

Extended X-ray Absorption Fine Structure (EXAFS)structural techniques

Page 14: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Distance of the bonding, adsorption site

X Ray Standing WavesStructureLow Energy Atom Diffraction (LEAD)

adsorbate vibration, surface phonons,

molecular tilt

Surface Plasmon Enhanced Raman Spectroscopy (PSPR) (SERS?)

specific chemical groups, adsorption site, molecular tilt

Infrared spectroscopy (IR)Infrared Reflection-Absorption Spectroscopy

(IRAS)

Structural parametersX-ray photoelectron diffraction (XPD or phD)

Page 15: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

adsorbate vibrations, phonons, adsorption sites

High Resolution Electron Energy Loss Spectroscopy (HREELS)

Conduction band, density of empty electronic states,

molecular orientation, bonding nature

X-ray absorption near edge spectroscopy (XANES)

valence band, density of occupied states, bonding nature, band dispertion

Ultraviolet photoemission spectroscopy (UPS)

elemental composition, chemical state, impurities

X-ray photoemission spectroscopy (XPS)

Surface elemental composition, growth

mode, coverage

Auger Electron Spectroscopy (AES)Electronic techniques

Page 16: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Scanning Tunneling Microscopy(invented in 1981)

Gerd Binnig y Heinrich Rohrer,IBM Research Laboratory, Zurich, Nobel Prize in Physics 1986

Topographic (real space) imagesSpectroscopic (electronic structure, density of states) images

Page 17: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Atomic resolution, several orders of magnitude better than the best electron microscope

Quantum mechanical tunnel-effect of electron

In-situ: capable of localized, non-destructive measurements or modifications material science, physics, semiconductor science, metallurgy, electrochemistry

Scanning Probe Microscopes (SPM): designed based on the scanning technology of STM

Page 18: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Experimental methods

the sample you want to study

a sharp tip mounted on a piezoelectric crystal tube to be placed in very close proximity to the sample

a mechanism to control the location of the tip in the x-yplane parallel to the sample surface

a feedback loop to control the height of the tip above the sample (the z-axis)

Basic Set-up

Page 19: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

I ∝ Ve-ks

I tunneling currentV bias voltage

S tip-sample distancek local barrier heigth

STM operates in UHV, air, liquids

STM conductors or semiconductors

a

b

c

Atomic and molecularresolution, real timeImaging of reactions

S electrodesorptionfrom Au(111) 0.1 M NaOH

Au(111)

G. Andreasen, C. Vericat, M.E. Vela and R.C. SalvarezzaJournal of Chemical Physics, 111, 9457-9460 (1999).

0.29 nm

(1x1)22x√3 22x√3

Page 20: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Sn → √3x√3 R30°

E = -0.6 V→ -0.8 V

-1.6 -1.2 -0.8 -0.4

-300

-200

-100

0

100

CI

CII

CIII

AIII

AII

AI

j /mA

cm

-2

E / V (vs. ECS)

G. Andreasen, C. Vericat,M.E. Vela,R.C. Salvarezza,J. Chem. Phys. 111, 9457 (1999).

ECSTM

Jingpeng Wang, University of Guelph

Page 21: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Scanning TunnelingSpectroscopy (STS)

STM tip

wire

Single moleculeconductance

k d

Spectroscopy (STS):By varying the potential difference between tip and sample, one can measure I(V) spectra as well as the differentialconductance dI/dV(V). In a very simple but realistic model, the differential conductance reflects directly the local electronic density of states (LDOS).

Page 22: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Reifenberger et al, Pardue University

Page 23: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Atomic Force Microscopy(all materials )

Binnig, Quate and Gerber, 1985

RepulsiveAttractiveCapillaryMagnetic…

Azurin on mica

Page 24: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Elemental composition,

Ultra High Vacuum TechniquesAuger Electron Spectroscopy (AES)

Energía Cinética /eV

50 100 150 200 250 300 350

dE(N

)/N (u

.a.)

(a)

(b)

Au

C

S

AES Hexanethiol on Au

S

C

Au

3-20 KeV

1960s

Page 25: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Me

S

S 2p

XPSDodecanethiol on Ni

X-ray Photoelectron Spectroscopy (XPS)

chemical nature of compounds

1960s by K. Siegbahn, Nobel Prizefor Physics in 1981

Al K alpha (1486.6eV) or Mg K alpha (1253.6eV)

Photon energyy

Page 26: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

SAMs preparation

Solution depositionInmersion

Electrochemistry

Gas phase deposition

Solution deposition: an easy and low cost method

Page 27: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

GAS PHASE DEPOSITION

CH3-(CH2)n-H2CSH + M CH3-(CH2)n-H2CS-M+ 1/2H2

41

40

39

38

37

550540530520

'int_S1sphoto2105.1_n'int_S1sphoto2105.2_n'int_S1sphoto2105.3_n'int_S1sphoto2105.4_n'int_S1sphoto2105.5_n'int_S1sphoto2105.6_n'int_S1sphoto2105.7_n'int_S1sphoto2105.8_n'int_S1sphoto2105.9_n'int_S1sphoto2105.10_ XPS Results for S 1s

photo peakhexanethiol on Au(111)

D.P.Woodruff et al

p(√3×5√3)R30º

Substrate bombarding (1KeV),annealing 530 C,30 min

300-9000 Langmiur

Page 28: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

200x200 nm2 STM images

(a)(b)

(a)

Ag(111) Au(111)

Clean Metal Substrates

d=0.29nm

d=0.29nm

Solution deposition of alkanethiolate SAMs

22x√330x30nm2

3x3nm2

3x3nm2

Page 29: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Solution depositionAu, Ag, Cu

Solvent: ethanol, toluene, etc

Substrateimmersion

CH3-(CH2)n-H2CSH + Me CH3-(CH2)n-H2CS-Me+ 1/2H2

Propanethiol hexanethiolon Ag(111) on Au (111)

(a) (b)(a) (b)

STM 4x4 nm2

d=0.47 nm d= 0.5 nm

Energía Cinética /eV

50 100 150 200 250 300 350

dE(N

)/N (u

.a.)

(a)

(b)

Au

C

S

Page 30: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

NiO + 2e- +H2O Ni + 2OH-

dodecanethiol-saturated aqueous 1 M NaOH

R-S- +Ni R-S-Ni+ e-

Electrochemical-induceddodecanethiolate self-assembly on Ni(111)

Bengió, Fonticelli,Benítez, Hernández Creus, Carro, Ascolani, Zampieri, Blum, Salvarezza,

J. Phys. Chem. B 2005, 109, 23450-23460

Ni poly

Page 31: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

4 micron x 4 micron image taken with ascanning probe microscope from an assembled

monolayer of silanes with two different chainlengths.

Jeffrey J. Weimer

Solution deposition ofself-assembled silanes

monolayers

Page 32: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Uniform and robust self-assembled silane monolayerson Si Surfaces

1) Fully hydroxylated Si by treatment in piranha solution2) OTS under strict anhydrous conditions (hexane)3) Cross-linking

Surfaces, prepared in the presence of moisture, exhibit nonuniformtopological and mechanical properties.

Octadecyltrichlorosilane (OTS) C=18

Page 33: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

A. Raman, M. Dubey, I. Gouzman, E. S. GawaltLangmuir 22, 6469 – 6472, 2006

Formation of Self-Assembled Monolayers of Alkylphosphonic Acidon the Native Oxide Surface of SS316L

The cleaned room-temperature substrates were dipped in a 1 mM solutionof octadecylphosphonic acid (ODPA) or octylphosphonic acid in dry tetrahydrofuran

Solution deposition of phosphonate SAMs

Page 34: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

α β

χ

sp sp3

Thiols onAu(111)

α = 30°β = 55°χ = 14°

Page 35: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

156158160162164166168170

S2p

Dodecanethiol

Hexanethiol

S-OctomersInte

nsity

(arb

. uni

ts)

Binding energy/ eV

XPS

S-Me bond: thiolate 40-60 Kcal mol-1

C. Vericat, M.E. Vela, G. Andreasen, R.C. Salvarezza, L. Vázquez and J.A. Martín-GagoLangmuir, 17, 4919-4924 (2001)

MAIN FORCES FOR SELF-ASSEMBLY:

alkanethiolate-alkanethiolateinteractions 1 Kcal mol-1 per C atom

Au(111)

Dodecanethiolon Ni(111)

and Ni poly

S 2p

Page 36: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Self-assembly: Low-coverages and transientsalkanethiolate phases on Au(111)

PinstripeTilt 30o(4×√3) Tilt 50o (2×√3) Tilt 50o(6×√3) Tilt 30o

C. Vericat, M.E. Vela ,R.C. Salvarezza PhysicalChemistry Chemical Physics, 7, 3258 (2005)

3) Vertical configuration

2) Parallel configuration

1) Adsorption atdefects

Page 37: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Stable phases

hexanethiolateon Au(111)

Page 38: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

TOF-DRS spectra forclean and thiol-coveredAg(111) surfaces.

Recoil intensities for Ag, H, and Cvs C3 dose. 1.Inset: span of the lower range in linear scale. Arrowsindicate major changesin sticking

Luis M. Rodriguez, J. Esteban Gayone, Esteban A. Sanchez, Oscar Grizzi, Barbara Blum, Roberto C. Salvarezza

110, 7095-7097 2006

√7 x √7 R 19.1° propanethiolatelattice

Alkanethiol self-assembly on Ag(111)

??

Page 39: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

fcc

fcc-bridge

bridge

hcp-bridge

hcp

fcc

hcp

Adsorption sites

√3x√3 R30°

DFT: bridge or fcc

Standing waves/Photoelectrondiffraction: top

top

STM tip

wire

Single moleculeconductance

Mark A. Reed

Page 40: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

w a i

a f

2qF

qqz

q//

ki

kf

n c

2q

kf

ki

q

GIXRD (CTRs)ID32 Sincrotron Grenoble

S-Au = 0.23 nmS-Au= 0.24 nm

42 % top58 % fcc

Dodecanethiol on Au(111)

Only one adsortion site?

STM two sites?

√3√x3 R30°

X Torrelles,C Vericat, M Vela, M. Fonticelli, M Daza Millone,RFelici,T-L Lee,| J Zegenhagen,|G Muñoz,J Gago,R C. Salvarezza, J. Phys. Chem. B 2006, 110, 5586-5594

Page 41: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

physisortion

chemisorption

H2

Page 42: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Jingdong Zhang,* Qijin Chi, andJens Ulstrup, Langmuirpublished in the web

D. Anselmetti et al., Europhys. Lett. 23, 421 (1993).

c(4x2)

Page 43: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

S-S distance ≈ 0.3 nm

C. Vericat, G. Andreasen, M.E. Vela,R.C. Salvarezza,J. Phys. Chem. B 104, 302 (2000).

S on Au(111)

P. Fenter, A. Eberhardt, P. Eisenberger, "n-Alkyl Thiols Self-Assembled as Disulfideson Au(111)", Science, 266, 1216-1218 (1994)

c(4x2)

Page 44: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

C(4x2)

RectangularZig-zag

F. Teran Arce, M. E. Vela, R. C. Salvarezza, A. J. ArviaLangmuir 1998, 14, 7203-7212

Page 45: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

620.22

1760.32

1260.37

530.45

1720.5

ReferenceS-S distance/nm

Page 46: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

STM: S vs methylene group

DFT calculations: methylene group

Diffraction techniques and IR in liquids: disorderin the terminal groups

a b

f

c

e

d

Maria Jos Capitan, Jesus Alvarez, Juan Jos Calvente, Rafael Andreu Angewandte Chemie, in press

(20x20 nm2) sequential in situ STM images c(4x2) ⇔ √3x√3 R30°transitions 0.1 M NaOH

C. Vericat, G. Andreasen, M.E. Vela, H. Martin, R.C. SalvarezzaJournal of Chemical Physics, 115, 6672-6678 (2001).

Page 47: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Alkyldisulfides

standing-upphase

low-densityflat-lying phase

thiolateradicals

Thermal Stability of Self -Assembled MonolayersAlkanethiolates Au(111)

Physisorbed chemisorbed

Au

thiol

Thermal ProgrammedDesorption

Scoles et al. J .Phys. Chem. B 102, 3456 (1998)

SAMs are stable below 80-90° C

R-S-S-R R-S•

Page 48: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

1.0

0.0

DR

Inte

nsity

/arb

. uni

ts

500450400350300Temperature (K)

Ag H C

-dIDR(H)/dT

2015105TOF (µs)

T=500 K

Ag, H and C recoil intensities vs. sample temperature. The full line is a fit to the H recoil intensity with a first orderdesorption model. The derivative –dIDR(H)/dT of the H data(dotted line) is included.

Time-of-flight directrecoiling spectroscopy

(TOF-DRS)

Propanethiolon Ag (111)

Thermal Stability of Self -Assembled Monolayers

Alkanethiolates Ag(111)

O. Grizzi et al

Page 49: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

monolayer

Electrodesorption (Ep)

Micelle formation

(a)

(c)

(b)

Negativecharge

Electrochemical stability

-1.2 -1.0 -0.8 -0.6 -0.4

-60

-40

-20

0

D

D '

E / V (SCE)

j / µ

A c

m-2

R-S-Au(111) + e = Au(111) + RS-

C. Vericat, G. Andreasen, M.E. Vela, H. Martin, R.C. SalvarezzaJournal of Chemical Physics, 115, 6672-6678 (2001)

STM in situ

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Dependence of the peak potential for alkanethiolelectrodesorption on the number of carbon units (n)

n

0 2 4 6 8 10 12 14 16 18

E p /V v

s SC

E

-1.8

-1.6

-1.4

-1.2

-1.0

-0.8

Au

Ag

Cu

NaOH 0.1M

O.Azzaroni, M.E. Vela, M. Fonticelli, G. Benitez, P. Carro, B. Blum, R.C. SalvarezzaJ.Phys.Chem.B 107 13446 (2003)

Solid line: experimental data

Dashed line: estimated from DFT

Selecting the SAM: hydrocarbon chain length effect

Voltammetric determination of Ep

Rotanting ring-disc+AES

Ni?

Slope : 3.5 kJ mol-1 / C unitVan der Waals + hydrophobic forces

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Electrode

Electroplating Bath

Self-AssembledMonolayer

Main factors ruling the stability of SAMs in electrochemical environments

Hydrophobic Forces+

Van der Waals Forces

Solvent+

pH

Metal Surface

The Electrochemical Stability of SAMs is ExtremelySensitive to the Nature of the Metal Surface !!!

Fonticelli, Azzaroni, Benitez, Carro SalvarezzaJournal of Physical Chemistry B, 108 1898 (2004).

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Alkanethiolate SAM composition

Thiol-Au bond difficult to distinghish from Sulfur-Au bondSulfide contamination?Free thiol molecules physisorbed on SAMs?

158159160161162163164165166167

C3 C2 C1

Binding energy [eV]

Inte

nsity

[arb

. uni

ts]

S 2p

S

S(CH2)

11CH

3

Page 53: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

J. M. Ramallo-López, L. J. Giovanetti, F. G. Requejo, S. R. Isaacs,Y. S. Shon, M. SalmeronPHYSICAL REVIEW B 74, 073410 2006

S-Au bond S-C bond (bonded thiol)Physisorbed Thiols(More important for curved surfaces)

Clean

As received

S-C (unbondedthiol)

???

Thiol cappedAu nanoparticles

Page 54: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

c(4x2) ⇔ √3x√3 R30° transitions

(20x20 nm2) in situ STM images

Cathodic polarization curve of hexanethiol-coveredAu(111)

Electrolyte 0.1 M NaOHSolid line first scan, dashedline second scan

Dynamics: In situ STM study of hexanethiolate SAM on Au(111)

-1 .2 -1 .0 -0 .8 -0 .6 -0 .4

-6 0

-4 0

-2 0

0

D

D '

E / V (S C E )

j / µ

A cm

-2

Vericat,Andreasen, Vela, Martin, Salvarezza Journal of Chemical Physics, 115, 6672-6678 (2001)

1 min 5 min 10 min

Page 55: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

F. Teran Arce, M. E. Vela, R. C. Salvarezza,A. J. ArviaLangmuir 1998, 14, 7203-7212

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Substrate mobility: hole coalescence

Mass transportsurface diffusioncoefficient goldadatoms (thiol-covered)≈10-18 cm2 s-1

Clean gold ≈10-15 cm2 s-1

Page 57: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Love, Estroff, Kriebel, Nuzzo,WhitesidesChemical Reviews, 2005, Vol. 105, No. 4 1121

SAMs quality: defects

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Depressions

Missing rowsin √3 x√3 R30

Molecular defects

Domainboundaries

Benítez, Vericat, Tanco, Remes Lenicov, Castez, Vela, Salvarezza Langmuir 20 5030 (2004)

SAMs quality: defects

Page 59: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Love, Estroff, Kriebel, Nuzzo,WhitesidesChemical Reviews, 2005, Vol. 105, No. 4 1121

SAMs on curved surfaces: Nanoparticles

planar vs curvedsurfaces

300 K 200 K

Page 60: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

One of the biggest problems withmolecule-based devices is pooryield. Often the overall device yieldwill be significantly less than 10 %, sometimes less than 1 %. Most of thedegradation occurs at the final metallization step, which it is calledthe "top contact problem".

Defects at SAMsMetal penetration

into SAMs

Decrease defect density (annealing)Use functionalized thiols (-COOH, -OH, -OCH3)Induce cross-linking in phenyl thiol by electron irrediation

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Love, Estroff, Kriebel, Nuzzo,WhitesidesChemical Reviews, 2005, Vol. 105, No. 4 1121

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Inhibition of Copper Corrosion by using dodecanethiol layers

c

d

eb

f

a

RMS30 nm

RMS30 nm

RMS33 nm

RMS56 nm

RMS73 nm

RMS390 nm

0.1 M NaCl4 days immersion

Thiol-covered Cu

Thiol-free Cu

1M Na Cl4days immersion

Cu polishedsubstrate

Highly hidrophobic chains

Blocking the transport of water and hydrated speciesto the metal surface

A. Azzaroni, M. Cipollone, M.E. Vela, R.C. Salvarezza Langmuir, 17, 2483(2001)

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Corrosion Inhibition by Thiol-Derived SAMs for Enhanced Wire Bondingon Cu Surfaces

Caroline M. Whelan Michael Kinsella Hong Meng Ho, Karen MaexDepartment of Electrical Engineering, Katholieke Universiteit Leuven, Belgium , JES January 8, 2004)

ORGANIC FILMS FOR PROTECTION OF COPPER AND BRONZE AGAINST ACID RAIN CORROSION

G. Brunoro, A. Frignani, A. Colledan, C. ChiavariCorrosion Science, Vol. 45, pp. 2219-2231 (2003).INHIBITION OF COPPER CORROSION BY SILANE COATINGSF. Zucchi, V. Grassi, A. Frignani, G. TrabanelliCorrosion Science, Vol. 46, pp. 2853-2865 (2004).

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(a)

(b)

Preparation of metal supported nanoparticles by confined growth at molecular defects

lateral: 5 nmheight : 0.3 nm

(a)

(b)

(d)

(c)

(a)(a)

(b)(b)

(d)(d)

(c)(c) Cu deposited ondodecanethiolcovered Au

Poorly connecteddeposit –preparationof standing free films(Cu, Ni, Co)

Page 65: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

0 50 100 150 350 400

(d)

(c)

(b)

(a)

x 10N

SAu

Kinetic Energy [eV]

dN(E

)/dE

[u.a

.]

AES spectra

Trapping molecules and ions: Methylene Blue on alkanethiolate SAMs

Benítez,Vericat, Tanco, Remes Lenicov, Castez, Vela, SalvarezzaLangmuir, 20, 5030-5037 (2004).

Au(111)

MB dimers?

Page 66: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

-1.4 -1.2 -1.0 -0.8 -0.6 -0.4-8

-4

0

4 8 12

-1.2

-0.8

PT smooth

DT smooth

DT rough

PT rough

j/mAc

m-2

E/V (SCE)

-0.08

-0.04

0

j/mAc

m-2

Ep

n

0 100 200 300 400 500

C

S

Au

(b)

(a)

dN/d

E [a

.u.]

Kinetic Energy [eV]

Z= 43 nm

Nanostructured gold surfaces(high-area)

Page 67: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

400 800 1200 1600

Inte

nsity

/ ar

b. u

nits

Raman shift /cm-1

ABC

Electrochemical and optical sensors

-0.7 -0.6 -0.5 -0.4 -0.3 -0.2 -0.1-3

-2

-1

0

1

2

3

j / m

A c

m-2

E / V (SCE)

647.1 nm

Methylene BlueRaman

Methylene BlueRedox behavior

V = 0.1 V s-1

Nanoestructuredgold surfaces

Page 68: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

SERS pre-resonant yellowlaser line 568 nm (circles).

Fully SERS resonant red line647 nm (squares).

N. Tognalli, A. Fainstein C. Vericat, M Vela, R. C. Salvarezza, J. Phys. Chem. B 2006, 110, 354-360

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0 4 8 12 160

10

20

30

40

50

q/µC

cm-2

d/A

Amount of electrochemically active MB vs spacer size

Electrochemically active MB for different thiols (spacers)

SI

thiols

Page 70: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Voltammetry AES

Negatively charged Fe-Ru complexes on cysteamine-Au(111)

Ru

L1L1

L1 L1

Fe

CNCN

CN CN

Fe

CNCN

CN CN

CN NC Ru

L1L1

L1 L1

Fe

CNCN

CN CN

Fe

CNCN

CN CN

CN NCRu

L2L2

L2 L2

CN NCNC CN

a)

1.2 0.8 0.4 0.0 -0.4 1.2 0.8 0.4 0.0 -0.4

1.2 0.8 0.4 0.0 -0.4

E/V vs. Ag/AgCl

1.2 0.8 0.4 0.0 -0.4

b)

c) d)

Figure 3- Square wave voltammetry for anions 1 (a) and 2 in water (b) and 2 (c) and 3 (d) in methanol.

Alborés, Slep, Baraldo,Benítez,Vela,Salvarezza

submitted

Molecular Wires:

Size= 4-14 nmWidth= 1.7-2 nm

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N

N

HN

NO

O

Au

S

(CH2)2

NH3+ Cl-

Au

S

(CH2)2

NH

(CH2)2

Au

cysteamine/H2O

2) NaBH4

1) formyl methyl-(isoalloxacine) MeOH

Covalent binding to functionalized SAMs

AES: SAM survives during the chemical reaction !!

E. J. Calvo, M. Rothacher†, C. Bonnazzola Wheeldon†, R. Salvarezza , M. E. Vela, G. Benitez, Langmuir 21, 7907-7911, (2005)

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NAD+ + H+

NADH

2 e-

NAD+ + H+

NADH

2 e-

Au isoalloxazine

cysteamine

Biomimetics with self-assembled monolayer of catalytically active tethered isoalloxazine on Au

Page 73: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects
Page 74: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

G. Whitesides et al, Chem. Rev 105, 1103 (2005); Nanotechnology”, G. Timp, Ed.; Springer Verlag: New York, (1999)

Pattern transfer: Microcontact Printing

Page 75: Self-Assembled Monolayers of Thiols on Metals: …pasi.mech.northwestern.edu/Lectures/Salvarezza.pdf · Self-Assembled Monolayers of Thiols on Metals: Surface Structures, Defects

Dip-Pen Nanolithography

Mass transportsurface diffusioncoefficient thiol on Au10-11cm2 s-1

(dry conditions)

Dip-Pen Nanolithography: transport of molecules

to the surfaceMirkin Group

P. E. Sheehan, L. J. Whitman Phys. Rev. Lett, 88, 156104-1, 2992

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25 µm

Pd domains (microparticles) Ag-tiol

Solution containing Pd+2 ions2 Ag + Pd+2 = 2Ag+ + Pd

O. Azzaroni, P.L. Schilardi and R.C. Salvarezza, “Encyclopedia of Nanoscience and Nanotechnology”,American Scientific Publishers, Volume 5, pp. 835-850(16) California, 2004.

Free-thiol Ag domains

UV

water

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Prepolymer + Pressure Polymer + Heat + Pressure Prepolymer + UV Radiation

Soft Lithography NanoimprintLithography

Step and FlashLithography

PDMS stamp Silicon stamp Quartz stamp

Soft Lithographic Techniques

Alkaline medium

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Soft-lithography at nanoscale: mainly used for soft-materials (polymers with low adherence)

When the master/material system exhibits non-negligibleadherence anti-sticking layers are needed

Anti-adherent layers: metals, oxides,sulfides,etc

Problems;

The roughness and grain size of the anti-adherent layerlimit resolution, hardly applicable to the nanoscale

Solution:

Self-assembled molecular films

Methyl-terminated alkanethiols and silanes

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master

Deposition

PatternedSurface

Patterning Hard Materials

master

Anti-adherent layer : Self assembledmonolayers (SAMs)

Release

Surfacemodification

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Material aEvaporar

Pasaje deCorriente Eléctrica

Fuente deTensión

ContactosEléctricos

Material aEvaporar

Flujo deMaterial

Evaporado

Sustrato

Blanco

Sustrato

Cámara de Vacío

Ventana de Cuarzo

Lente

Espejo

Láser

Pluma

Ingreso de Gases

Blanco

Sustrato

Cámara de Vacío

Ventana de Cuarzo

Lente

Espejo

Láser

Pluma

Ingreso de Gases

Ar+

Ar+

Ar+Ar+

Plasma

ÁtomosEyectados

Sustratos Ánodo

Flujo deIones

Blanco (Cátodo)

Ar+Ar+

Ar+Ar+

Ar+Ar+Ar+Ar+

Plasma

ÁtomosEyectados

Sustratos Ánodo

Flujo deIones

Blanco (Cátodo)

laser ablationSemiconductors (ZnO)

Electrodeposition(metals,alloysZnO, Cu2O)

“reactive sputtering ”(ceramics, TiN, AlN)

Evaporation(metals)

KEY POINT :SAM must surviveunder deposition

conditions

DEPOSITION ON SAMs

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6.5 7.2 7.9 7.97.26.5E (keV) E (keV)

FeFe

Co Co

Ni Ni

NiNi

x /µm0 2 4 6 8 10

Molde

Original

RMS = 3,0 nm

RMS = 9,1 nm

50 x 50 µm250 x 50 µm2

12 x 12 µm2 250 x 250 nm2

Molding ElectrodepositedSoft Magnetic Alloys Fe11Co38Ni51

Cu stamp

0.06 M CoSO4.7H20 +0.2 M NiSO4.6H20 + 0.015 M FeSO4.7H20+ 0.028 M NH4Cl + 0.4 M H3BO3 + 2.6x10-4 M thiourea, pH = 2.8, j = 20 mA cm-2

T. Osaka Nature 392 796 (1998)

O. Azzaroni, P.L. Schilardi, R.C. Salvarezza, Appl.Phys.Lett. 80 ,1061 (2002)

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L /µm0 5 10 15 20

(b)

Roughness = 1.8 nm

L /µm0 5 10 15 20

(a)

Roughness = 9.2 nm10 nm 10 nm

L /µm0 1 2 3 4 5

z /n

m

0

100

200

(a)

(b) 768 nm

Cu master Cu2O

0.4 M CuSO4.5H2O + 3 M lactic acid pH = 9, T = 60oC Switzer et al. Scripta Materialia 38,1731 (1998)

Ed = -0.45 V

Molding Electrodeposited Oxides

Salvarezza et al, Chem. Eur. J. 2006, 12, 38–49

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L /µm0 2 4 6 8 10

z/ n

m

0

100

200

L /µm0 2 4 6 8 10

z/ n

m

0

100

200

L /µm0 2 4 6 8 10

z /n

m

0

100

200

L/µm0 2 4 6 8 10

z/ n

m

0

100

200

Thermal Evaporation

E-Beam Evaporation

ReactiveSputtering

(a) (c)

(b) (d)

Auger, Schilardi, Benítez, Gago, Fonticelli, Vazquez, Salvarezza O. Azzaroni , concept article, Small 1, 300 (2005)

Micropatterning ceramicmaterials by reactive sputtering

Anti-adherent layer:dodecanethiolCu masters Au

B4CTiN

L /µm0 2 4 6 8 10 12 14

z /n

m

050

100150200250

L /µm0 2 4 6 8 10

z /n

m

050

100150200250

(a)

(c)

(b)Rugosidad: 4,07 nm

Rugosidad: 3,77 nm

765 nm

Micropatterningsemiconductor

materials by laser ablation

Azzaroni, Schilardi, Salvarezza, Herrero, Zaldo, Vázquez.Applied Physics A 81, 109 (2005)

ZnO

AFM images

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5nm Al

TiN

Si master

Nanopatterning metals and ceramics

Dot size 40 nm O. Azzaroni, M. Fonticelli,P. Schilardi,G. Benitez, I. Caretti, R. Gago,L. Vazquez, R.C. SalvarezzaAdvanced Materials 16, 405 (2004)

Au

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(a)

(e)

(b)

(d)

(f)

(c)

Nanopatterning polymeric materials

Silicon-masternanodotsDiameter = 40 nmHeight = 5 nm

Patterned Polystyrene

Patterned high-impactpolystyrene

O. Azzaroni, P.L. Schilardi, L.Vazquez and R.C. SalvarezzaApplied Physics Letters, 82, 453 (2003)

Si

SiO2

Si

SiO2

OTS

polymeric material

SiSiSi Si

Si

SiO2

OTS

derivatization

polymercasting

Si

SiO2

OTS

polymeric materialdetachment

Anti-adherent layer:Silanes (OTS)

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SAMs are the most simple example of nanostructuredsystems. The molecules contain all the informationneeded to form two dimensional systems with specificchemical functionalities

The control de SAMs at the molecular lavel is crucial for their posible use in :1) Molecular electronics2) Metal protection3) Anti-adherent layers for nano/micromolding4) Building blocks for complex structures