organic reaction mechanism
TRANSCRIPT
Substitution Reactions
Nucleophilic Substitution
Electrophilic Substitution
Free radical Substitution
Nucleophilic Substitution Reaction
nucleophilicsubstitution
Nucleophile
++ C NuC XNu - X-
leavinggroup
C-L bond cleaved C-Nu bond formed
Types of Nucleophilic Substitution
SN1 : substitution nucleophilic unimolecularSN2 : substitution nucleophilic bimolecularSNi : substitution nucleophilic intramolecular
Points to be discussed for SN1 and SN2Definition with examples MechanismKineticsStereochemistryFactors influencing the reaction rate
SN2 : Bimolecular nucleophilicsubstitution
Examples
Mechanism
The nucleophile and the alkyl halide combine to form a pentacoordinate transition state. This is the slow rate determining step (r.d.s); it entails two species, R-X and Nu . The dotted lines indicate partially formed or Өpartially broken covalent bonds.
C Br
H
HH
HO + C
H
H H
HO Br
δ- δ-
Transition state withsimultaneous bond breaking
and bond forming
C
H
HH
HO + Br -
Kinetics
The reaction involves a transition state in which both reactants R-X and OH- are together
Rate = k[RX][OH]
The study of rates of reactions is called kinetics
The rate is dependent of the concentration of two species, i.e. the alkyl halide and NaOH.
The transition state of an SN2 reaction has a planar arrangement of the carbon atom and the remaining three groups
Occurs with inversion of chiral center called Walden Inversion.
Stereochemistry
Tetrahedral Planar Transition state
SN1 : Unimolecular nucleophilic substitution
ExampleSolvolysis of tert-butyl bromide to give tertiary butyl alcohol.
MechanismStep 1: the leaving group dissociates to form a carbocation
C
CH3
CH3H3 C
+C
H3C
H3 C
Br
H3 C
slow, ratedetermining
A carbocation intermediate; carbon is trigonal planar
+ Br
Step 2: reaction of the carbocation (an electrophile) with water (a nucleophile) gives an oxonium ion
Step 3: proton transfer completes the reaction
CH3 O
H H3 C
C
CH3
CH3
OCH3
H
C
CH3
CH3
CH3
O
H3 C
HH3 C
H3 C
C
H3 C
O
CH3
H
fast ++ ++
++++ fastC
H3 CH3C
O
H3 C
OCH3
H
OHO
CH3CH3
H
H
CH3
H3C
CH3 C
H3C
HH
H
H
H
H H
H
Kinetics First order Rate-determining step is formation of carbocation Rate = k [RX] Depends only on the concentration of the substrate
SN2SN1
StereochemistryProceed with partial recemisation and some inversion
Recemisation : the nucleophile can attack from either face of the planar carbocation intermediate
(R)-Enantiomer Planar carbocation (achiral)
C
H
Cl
C6 H5
Cl
C+
C6 H5
H
Cl
CH3 OH-Cl-
-H+
+
A racemic mixture
Cl
C6H5 C6H5
C OCH3
H
CH3 O CH
Cl(R)-Enantiomer(S)-Enantiomer
Frequent complication: the Leaving Group will tend to block approach of the nucleophile leading to more inversion than retention for the SN1
SN1 in reality: Formation of ion pair
Factors influencing the rate of the reaction
Effect of Substituent Nature of the nucleophile Nature of the leaving group Solvent effect
Effect of substituents on SN reaction
governed by electronic factors namely the relative stabilities of carbocation intermediates
relative rates: 3° > 2° > 1° > methyl
SN1 reactions
SN2 reactions governed by steric factors namely the relative ease of approach
of the nucleophile to the site of reaction relative rates: methyl > 1° > 2° > 3°
The SN2 reaction is fastest with unhindered halides.
Nucleophile
Nucleophile is a neutral or negatively charged Lewis base.
Anions are usually more reactive than neutrals
More basic nucleophiles react faster
Better nucleophiles are lower in a column of the periodic
table
Order of nucleophilicity
NH2- > RO- >OH- >RNH- > ArO- >NH3
- > pyridine > F->H2O
I- >Br- > Cl- > F- (in polar protic solvents)
F- > Cl- > Br- > I- ( aprotic solvents)
Leaving group
Stable anions that are weak bases are usually excellent leaving groups and can delocalize charge
Protic solvent: a solvent that can form hydrogen bond (-OH, -NH)
these solvents favor SN1 reactions; the greater the polarity of the solvent, the easier it is to form carbocations in it
Aprotic solvent: does not contain an -OH group it is more difficult to form carbocations in aprotic solvents aprotic solvents favor SN2 reactions
Solvent effect
Solvent effect Solvents that can donate hydrogen bonds (-OH or –NH)
slow SN2 reactions by associating with reactantsEnergy is required to break interactions between reactant
and solventPolar aprotic solvents (NH, OH, SH) form weaker
interactions with substrate and permit faster reaction
Electrophilic Substitution
Chemical reactions in which an electrophile displaces a group in a compound.
Electrophilic aromatic substitution Electrophilic aliphatic substitution
R-X + E + R-E + X+
electrophile displaces a functional group in aliphatic compounds
Mechanism
Substitution electrophilic unimolecular (SE1)
Step-1 R X R X+
Step-2 R YR Y+
Slow
Substitution electrophilic bimolecular (SE2)
C XY
C Y X+
SE2 (back)Inversionof configuration
C X Y C
Y
X+
SE2 (front) Retention of configuration
Substitution electrophilic internal (SEi)
When the electrophile attacks from the front and a portion of it assists in the removal of leaving group
C X Y C
Y
X+
SEi Retention of configuration
ZZ
Nitrosation
Secondary amines and mono-N-substituted amides (RCONHR’) undergo N-nitrosation when treated with nitrous acid
Nucleophiles Cl-, SCN- and thiourea catalyze the reaction
Aliphatic diazonium coupling
Compounds containing active hydrogen (acidic C-H bond) couple with diazonium salts in presence of base
Z-CH2-Z’ + ArN2 Z C
Z'NHAr+
Z, Z’ = electron withdrawing groups such as NO2, CN, COOR, SO2R, COR
Reaction proceeds through SE1 mechanism
R2N-NOR2NH + HONO
Electrophilic aromatic substitution Atom appended to the aromatic ring, usually hydrogen, is replaced by
an electrophile
Mechanism: Arenium Ion
E
H
:A-
EH A+
Step-1
Step-2
slow E AE
H
E
H
E
H
Arenium ions
The proton is removed by any of the bases
X2, FeX3
(x = Cl, Br)
X
HX
R
CR
O
SO3H
NO2
HONO2
H2SO4
SO3
H2SO4
RCl, AlCl3
(R can rearrange)
RC Cl, AlCl3
O
H2O
HCl
HCl
+
+
+
+
Halogination
Nitration
sulfonation
Friedel-Crafts alkylation
Friedel-Crafts acylation
Substituent groups on a benzene ring affect electrophilic aromatic substitution reactions in two ways:
1) Reactivity activate (faster than benzene) or deactivate (slower than benzene)
2) Orientation ortho and para- direction or meta-direction
-NH2, -NHR, -NR2
-OH-OR-NHCOCH3
-C6H5
-R-H-X-CHO, -COR-SO3H
-COOH, -COOR-CN-NR3
+
-NO2
incr
easi
ng r
eact
ivit
y ortho/para directors
meta directors
If there is more than one group on the benzene ring:
The group that is more activating (higher on “the list”) will direct the next substitution.
Little or no substitution between groups that are meta- to each other.
CH3
OH
NHCOCH3
CH3
CHO
OCH3
Br2, Fe
HNO3, H2SO4
Cl2, Fe
CH3
OH
Br
NHCOCH3
CH3
NO2
CHO
OCH3
Cl
CHO
OCH3
Cl+
Free Radical Substitution Reaction
Alkanes undergo substitution reactions with halogens such as fluorine, bromine and chlorine in the presence of heat or light.
X=F, Cl, Br, I
CH4 + X2 CH3X + HX hν
or heat
Radical halogenation can yield a mixture of halogenated compounds because all hydrogen atoms in an alkane are capable of substitution
Monosubstitution can be achieved by using a large excess of the alkane
Bromine is less reactive but more selective than chlorine
The reaction mechanism has three distinct stepsMechanism
Initiation
Propagation
Involves the production of free radicals in presence of light or heat
Involves the reaction of free radicals with molecules to produce free radicals
A single chlorine radical can lead to thousands of chain propagation cycles
Termination
Involves the reaction of free radicals to produce a molecule
Occasionally the reactive radical intermediates are quenched by reaction pathways that do not generate new radicals
The reaction of chlorine with methane requires constant irradiation to replace radicals quenched in chain-terminating steps
30
• Halogenation at an allylic carbon often results in a mixture of products. Consider the following example:
• A mixture results because the reaction proceeds by way of a resonance stabilized radical.
Radical Reactions
Radical Halogenation at an Allylic Carbon:
Reactivity
Stereochemistry
The alkyl radical having planar structure is attacked from both faces with equal ease to form racemic mixture
Electrophilic Addition Reactions
Unsaturated hydrocarbon: contains one or more carbon-carbon double or triple bonds undergo electrophilic addition reactions
The π electrons are less tightly held and acts as a source of electrons (nucleophile).It reacts with electron deficient compounds (electrophile) forming addition product
Addition reactions are exothermic (two stronger σ bonds formed in expanse of one π bond)
KineticsSecond order
Rate = [alkene] [E-Nu]
Stereochemistry
Two modes of addition is possible
Anti addition: E+ and Nu- added from same side
Syn addition: E+ and Nu- added from same side
Carbocations are planar -> attack from both sides possible!!
Bromination of alkene
Mechanism
CH3-CH=CH2 + HCl
CH3-CH=CH-CH3 + HCl CH3-CH-CH2-CH3
ClSymmetrical Symmetrical
Unsymmetrical
CH3-CH=CH2 + Br2 CH3-CH-CH2-BrBrSymmetrical
only one possible product
CH3-CH2-CH2-ClCl
CH3-CH-CH3+
Two possible productMarkovnikov product
Markovnikov’S Rule:
In the ionic additions of an unsymmetrical reagent to a double bond, the positive portion of the adding reagent attaches itself to a carbon atom of the double bond so as to yield the MORE STABLE CARBOCATION as an INTERMEDIATE
UnsymmetricalUnsymmetrical
H
H3C
H
H
H ClH
H3C
H
H
H
H
H3C
H
H
H ClH
H3C
H
H
Cl
H3C
H
H
H
Cl
HH
fabourable secondary carbocation
unstable primary carbocation
Markovnikov product
Addition is regioselective (regioselective reaction: a reaction in which one direction of bond-forming or bond-breaking occurs in preference to all other directions
Another example
Addition of HBr
Peroxide
(-O-O-)
Markovnikov product
Anti-Markovnikov product
In absence of peroxide (ionic mechanism)
Markovnikov product
In presence of peroxide (free radical mechanism)
Radical addition leads to the formation of the more stable radical, which reacts with HBr to give product and a new bromo radical.
Anti-Markovnikov product
Carbocation rearrangement
favourable tertiary carbocation
Alkenes –Addition of halogens in water under basic conditions -> Epoxides
Alkenes –Addition of halogens in water -> Halo alcohol (halohydrin)
Alkenes –Addition of BH3 followed by oxidation-> Anti-Markovinkov addition of water
Alkynes –Addition of halides
HR2HBr
H
H
H
Br
Br
R
Elimination ReactionsNucleophilic substitution reaction there must be the possibility of competing elimination reactions
The nucleophiles can attack the electrophilic site to give the substitution product or they can act as bases giving the elimination products
Elimination
Substitution
Substrate compound must have nucleophilic group as leaving group
Common leaving groups
X (Br, Cl, F), OH, OR, N3, N2+, OTs, NR3
+, H2O+, SR2+
Elimination usually produce a new π-bond in the modified substrate
CH3-CH-CH2-L CH3-CH=CH2 + H+ + L-
HLeaving group
In some elimination a new sigma bond is produced instead of π-bond
Br
H
BBH Br+ +
New σ-bond
π-bond in the product
Elimination reaction
E1 (Elimination unimolecular) Reactions – one molecule (the substrate) in r.d.s. E2 (Elimination Bimolecular) Reactions -two molecules (the substrate and base/nucleophile) in r.d.s.
E1 Mechanism
The first step of E1 and SN1 mechanisms is identical
Kinetics
First order
Rate = k [R-X]
Rate: R3CX > R2CHX > RCH2X
More substituted halides react fastest
Favored by weaker bases such as H2O and ROH
Polar protic solvents that solvate the ionic intermediate favours the E1 mechanism
Major product is according to Saytzeff ruleThy hydrogen is removed from the β-carbon bonded to the lowest hydrogens
Two elimination productIntermediate carbocation
70%
30%
+
Thermodynamically stable product
Generally, the more substituted the alkene, the more stable it is.
Hofmann Elimination product (Less substituted alkene) When the base is bulky Steric hindrance at β-carbon When the leaving group is a pore leaving group such as F, NR3
+ and SR2+
When the alkyl halide contains one more double bonds
H3C C
CH3
CH3
H2C
CH3
Br
CH3 CH3O H3C C
CH3
CH3
CH
C
CH3
CH3
H3C
CH3
CH3
H2C C
CH3
CH2+ +
12% 88%
Crowding at β-carbon
+H2C
HC CH
CH3
CH3Br
CH
CH
CH
CH3
CH3
H2C C
HC
CH3
CH3
major product minor productPoor leaving group
Contains one or more double bonds
CH3O+ +30%70%
H3CH2C C
HCH3
F
H3CH2C C
HCH2 H3C C
HCH
CH3
H3C C
CH3
Br
H2C CH3 +
20%80%
H3C C
CH3
Br
O H2C C
CH3H2C CH3 + H3C C
CH3
CH
CH3
Bulky base
Elimination products: Hofmann VS. Saytzeff
Bulky bases increase the proportion of the less substituted alkene (Hofmann product)
Bulky base (tertiary alkoxide)
The H’s on the less substituted β carbon are more sterically accessible to the base than the H’s on the more substituted β carbon
Substitution versus elimination: SN1 Vs E1
C
H3C
H3CH3C
Br slow
H2O, EtOH CH3
CH3C C
H
H H
Br+
OHH
CH3
CH3C C
H
H H
OH H
kelim
ksub
CH3
CH3C C
H
H
H3O
C O
H3C
H3CH3C
H
H H2O C O
H3C
H3CH3C
H64% SN1 product
37% E1 product
H3O
+
+
Step-1
Step-2
As E1 reaction involves the formation of carbocation intermediate, rearrangement of the carbon skeleton can occur before the proton lost.
E2 Mechanism
KineticsSecond order
Rate = k [R-X] [base]
R3CX > R2CHX > RCH2X Favored by strong base Favored by Polar aprotic solvent
Relative reactivities of alky halide in an E2 reaction
Stereochemistry of the E2 reaction
The leaving group and the H atom can be syn or anti to each other
Syn-elimination (substituents removed from same side)Anti-elimination (substituents removed from opposite side)
Favored in E2 reaction
H3C CCH3
H3CBr H3CH2C O
H3CC
CH2
CH3
100%
CH3CH2BrH3CH2C O
H3CH2C O CH2CH3 99%
Substitution versus elimination: SN2 Vs E2Because many good nucleophiles are also good bases, SN2 often competes with E2 for those substrates that are good for SN2
H3C CCH3
H Br H3CH2C O
H3C CCH3
HOCH2CH3
H3C CCH2
H
21%
79%
substitution product elimination product
To promote E2 over SN2 we want to use strong bases that or non-nucleophilic.
elimination product
substitution product