honors - carbon & organic compounds 1213

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Organic Compounds Enzymes

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Organic CompoundsEnzymes

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Figure 4.1

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Figure 4.2EXPERIMENT

“Atmosphere”

Electrode

Condenser

CH4

H2NH3

Water vapor

Cooled “rain”containingorganicmolecules

Cold water

Sample for chemical analysis

H2O “sea”

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Figure 4.7(a) Structural isomers

(b) Cis-trans isomers

(c) Enantiomers

cis isomer: The two Xsare on the same side.

trans isomer: The two Xsare on opposite sides.

CO2HCO2H

CH3

H NH2

L isomer

NH2

CH3

H

D isomer

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Figure 4.8

Drug

Ibuprofen

Albuterol

ConditionEffective

EnantiomerIneffectiveEnantiomer

Pain;inflammation

Asthma

S-Ibuprofen R-Ibuprofen

R-Albuterol S-Albuterol

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Figure 4.UN02

Estradiol

Testosterone

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Carbonyl

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Hydroxyl

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Carboxyl

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Amino

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Phosphate

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Methyl

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Sulfhydryl

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What does this mean about connection between Genes and Protein?

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Monomers and Polymers

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Cooperative Binding

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Carbonic Anhydrase

• 104 to 106 reactions per second.

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QUESTION: In ray-finned fish how does the Root effect allow unloading of oxygen to peripheral tissues without compromising its uptake in the gills during blood acidosis.

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No plamsa-accessible CA (in gills)

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Functions of Proteins

When in doubt…..proteins

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Storage

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Structural

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Transport

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Hormonal

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Receptor

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Contractile & Motor

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Defensive

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Enzymes

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Restriction Enzyme

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Enzymes

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Enzyme Simulation

• How is the velocity of an enzyme reaction effected by:– pH– Temperature– Substrate Concentration

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Initial Velocity (V0 or VI)

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Initial Velocity (V0 or VI)

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Vmax

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Enzymatic Pathway

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Protein Quantification

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Starch

Glucose

Starch

Monomers vs. polymers

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LACTASE: LCT (Single Mutation)

AMYLASE:AMY Gene (multiple copies)

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