era7 bacterial genome annotation

BACTERIAL GENOME ANNOTATION

SERVICE

www.era7bioinformatics.com

Specifically designed for data

Our service highlights

Based on


So it’s and

It’s according to our customer needs

specifically designed for data



Error-tolerant system

It can handle sequencing errors that may cause:


Indels, Frameshifts, Base substitution


Error-tolerant system

It can handle sequencing errors that may cause:


Works with

Large number of contigs: There’s no need to have the genome closed

Large Bacterial Genomes: Up to 7Mb genomes annotated successfully

Indels, Frameshifts, Base substitution

We use

So our service is

In 24 hours you can have your bacterial genome analyzed



We use

So our service is




and

whether you need to annotate 1 genome or 100 we can handle it

It’s

The annotation can be focused on particular aspects you may be interested in:


may be interested in:

The presence of a particular enzime activity

Resistance to antibiotics

Mobile elements…

annotation

The annotation system is based on the latest releases of


Uniprot and GenBank databases

So you’ll get an up to date annotation

Sequencing data


Sequencing data

Sequencing data


Sequencing data

Info about yourproject, your needs

Sequencing data


Sequencing data


Reference Proteinsand RNAs

Sequencing data

Manual selection by an expert in bacterial

genomics


Sequencing data



genomics

Sequencing data


genomics


Sequencing data



genomics

BG7

Sequencing data

Preliminaryresults


genomics


Sequencing data



genomics

BG7

Sequencing data

Preliminaryresults


genomics

AutomatedQC Tests


Sequencing data



genomics

BG7Results

Passing QC tests

Sequencing data

Preliminaryresults


genomics

AutomatedQC Tests


Sequencing data



genomics

BG7Results

Passing QC tests

Definitiveresults

Sequencing data

Preliminaryresults


genomics

AutomatedQC Tests

An expert in


Sequencing data



genomics

BG7Results

Passing QC tests

Definitiveresults

An expert in Bacterial genomics checks that everything is

OK

Sequencing data

Preliminaryresults


genomics

AutomatedQC Tests

An expert in


Sequencing data


24 hrReference Proteinsand RNAs

genomics

BG7Results

Passing QC tests

Definitiveresults


OK

AutomatedQC Tests

Sequencing data

Preliminaryresults

An expert in


genomics


Sequencing data


24 hrReference Proteinsand RNAs

BG7Results

Passing QC tests

Definitiveresults


OK

genomics

BG7 System

Input contigs (nt)A

B

C


Input contigs (nt)A

B

C

A B C

BG7 System


Input contigs translated into the 6 reading frames (aa)

Input contigs (nt)A

B

C

A B C

BG7 System



Reference Proteins (aa)

Input contigs (nt)A

B

C

A B C

BG7 System



Reference Proteins (aa)are searched in the translated contigs

Genes are defined based on sequencesimilarity to proteins

BG7 System


A

B

C

RNAs and then searched for in the contigsand annotated

Genes are defined based on sequencesimilarity to proteins

BG7 System


A

B

C

What would you get at the end?

A Fast and Accurate genome annotation rich in functional data: GO, Interpro…

Deliverables in several formats:


Deliverables in several formats:

XML, GenBank, GFF, Fasta, .xls (Excel), .doc (Word), .txt

An user friendly annotation viewer

And some important things to know:

Working with us means

No IP over the results, they’re all yours

CDA

Bill by project


Bill by project

Of course, there are other ways…

research collaboration

Follow us on:

eduardopareja marina_manrique rtobes

Eduardo Pareja Marina Manrique Raquel Tobes


Marina Manrique Raquel Tobes

Join our NGS group at LinkedIn

[email protected]

[email protected]

[email protected]

era7 bacterial genome annotation

Technology