encylopedia of life informatics (data model) workshop: engaging partners

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Encyclopaedia of Life: Informatics Workshop, February 9- 10, 2007 Marine Biological Laboratory, Woods Hole, Mass. Martin R. Kalfatovic Smithsonian Institution Libraries Encyclopedia of Life Informatics (Data Model) Workshop Engaging Partners The Biodiversity Heritage Library Martin R. Kalfatovic Smithsonian Institution Libraries

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Presentation given at the Encyclopedia of Life Informatics workshop at the Marine Biological Laboratory (Woods Hole), February 9, 2007

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Page 1: Encylopedia of Life Informatics (Data Model) Workshop: Engaging Partners

Encyclopaedia of Life: Informatics Workshop, February 9-10, 2007Marine Biological Laboratory, Woods Hole, Mass.

Martin R. KalfatovicSmithsonian Institution Libraries

Encyclopedia of LifeInformatics (Data Model)

WorkshopEngaging Partners

The Biodiversity Heritage Library

Martin R. KalfatovicSmithsonian Institution Libraries

Page 2: Encylopedia of Life Informatics (Data Model) Workshop: Engaging Partners

Encyclopaedia of Life: Informatics Workshop, February 9-10, 2007Marine Biological Laboratory, Woods Hole, Mass.

Martin R. KalfatovicSmithsonian Institution Libraries

Engaging Partners Round Table• Martin R. Kalfatovic

– Head, New Media Office and Preservation Services DepartmentSmithsonian Institution Libraries

• Areas of Interest– Digital conversion technologies– Network information discovery and retrieval– Technology review editor, Library Information

Technology Association (LITA)• Areas of Work

– Writing purchase orders and annoying staff in the contracts office

Page 3: Encylopedia of Life Informatics (Data Model) Workshop: Engaging Partners

Encyclopaedia of Life: Informatics Workshop, February 9-10, 2007Marine Biological Laboratory, Woods Hole, Mass.

Martin R. KalfatovicSmithsonian Institution Libraries

Vast, But Not Infinite

Page 4: Encylopedia of Life Informatics (Data Model) Workshop: Engaging Partners

Encyclopaedia of Life: Informatics Workshop, February 9-10, 2007Marine Biological Laboratory, Woods Hole, Mass.

Martin R. KalfatovicSmithsonian Institution Libraries

Vast, But Not Infinite

• 100 characters (Western European languages, plus spaces and some punctuation)

• Each line has 50 spaces• Each page is 40 lines long• Each book is 500 pages long• Total Books: 100 1,000,000

• Googolplex: 1 followed by a googol (10 100) zeros

Kurd Lasswitz, “The Universal Library.” 1901

Jorge Louis Borges, “The Library of Babel.” 1941

Daniel Dennett, Darwin's Dangerous Idea. 1995

Page 5: Encylopedia of Life Informatics (Data Model) Workshop: Engaging Partners

Encyclopaedia of Life: Informatics Workshop, February 9-10, 2007Marine Biological Laboratory, Woods Hole, Mass.

Martin R. KalfatovicSmithsonian Institution Libraries

But where can we put it?

• Compressed (at today’s standards) this would be about 50 petabytes (about the size of a small-town library building)

Page 6: Encylopedia of Life Informatics (Data Model) Workshop: Engaging Partners

Encyclopaedia of Life: Informatics Workshop, February 9-10, 2007Marine Biological Laboratory, Woods Hole, Mass.

Martin R. KalfatovicSmithsonian Institution Libraries

Digitization Projects

• Amazon: Search Inside the Book• Google Book Search• Microsoft Live Text!

• Open Content Alliance• Biodiversity Heritage

Library

Page 7: Encylopedia of Life Informatics (Data Model) Workshop: Engaging Partners

Encyclopaedia of Life: Informatics Workshop, February 9-10, 2007Marine Biological Laboratory, Woods Hole, Mass.

Martin R. KalfatovicSmithsonian Institution Libraries

Challenges/Opportunities

• Cheap Scanning– Internet Archive Scribe– Kirtas APT 2400 Scanner

Page 8: Encylopedia of Life Informatics (Data Model) Workshop: Engaging Partners

Encyclopaedia of Life: Informatics Workshop, February 9-10, 2007Marine Biological Laboratory, Woods Hole, Mass.

Martin R. KalfatovicSmithsonian Institution Libraries

What Do You Do With a Million …?

• Books?• Name strings?• Images?• Specimens?• Web pages?

Page 9: Encylopedia of Life Informatics (Data Model) Workshop: Engaging Partners

Encyclopaedia of Life: Informatics Workshop, February 9-10, 2007Marine Biological Laboratory, Woods Hole, Mass.

Martin R. KalfatovicSmithsonian Institution Libraries

Engaging Partners• Can the layered

architecture accommodate input from and contribute to your project?–Yes

Page 10: Encylopedia of Life Informatics (Data Model) Workshop: Engaging Partners

Encyclopaedia of Life: Informatics Workshop, February 9-10, 2007Marine Biological Laboratory, Woods Hole, Mass.

Martin R. KalfatovicSmithsonian Institution Libraries

Engaging Partners• Do you have any

software / components that you would like to integrate within the EoL informatics package?–Chris Freeland

Page 11: Encylopedia of Life Informatics (Data Model) Workshop: Engaging Partners

Encyclopaedia of Life: Informatics Workshop, February 9-10, 2007Marine Biological Laboratory, Woods Hole, Mass.

Martin R. KalfatovicSmithsonian Institution Libraries

Engaging Partners• Can we build

crosswalks with your project?–BHL data will

provide the historic groundwork for a significant number of EoL species content

Page 12: Encylopedia of Life Informatics (Data Model) Workshop: Engaging Partners

Encyclopaedia of Life: Informatics Workshop, February 9-10, 2007Marine Biological Laboratory, Woods Hole, Mass.

Martin R. KalfatovicSmithsonian Institution Libraries

Engaging Partners• What changes to the data

model or additional WorkBench modules would help meet your needs ... – Within the WorkBench layer,

building bibliographic citation scraping tools that can roundtrip between EoL and other tools: e.g. Zotero and Connotea

Page 13: Encylopedia of Life Informatics (Data Model) Workshop: Engaging Partners

Encyclopaedia of Life: Informatics Workshop, February 9-10, 2007Marine Biological Laboratory, Woods Hole, Mass.

Martin R. KalfatovicSmithsonian Institution Libraries

Engaging Partners

“The world has arrived at an age of cheap complex devices of great reliability; and something is bound to come of it”- Vannevar Bush (1945)