Transcript
Page 1: HPP –  Shotgun  Status

HPP – Shotgun Status

• A.M.• 30/11/2012

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Project 22/8

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FDR 1%: Protein level

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Peptides & proteins by labs

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Proteins by experiment

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Exclusive Proteins (including secretome)

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Chr16 - distribution

Prot: 537Genes: 385

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Exclusive proteins Chr16

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FDR 1% at peptide level from 24 experiments

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FDR 1% at peptide level from 24 experiments

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Exclusive Proteins

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Exclusive Proteins of chromosome 16

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Protein increase with experiment number

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Quantitative information?

Q = # peptides/kDa

Only for chromosome 16 proteins

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Quantitative information?

5 Less abundant proteins of chromosome 16• CHD9_HUMAN Chromodomain-helicase-DNA-binding protein• CBP_HUMAN CREB-binding protein• Isoform 3 of Dynein heavy chain 3, axonemal• RBBP6_HUMAN Isoform 3 of E3 ubiquitin-protein ligase RBBP6• ZN646_HUMAN Zinc finger protein 646

5 Most abundant proteins of chromosome 16• RS2_HUMAN 40S ribosomal protein S2• RS15A_HUMAN 40S ribosomal protein S15a• COTL1_HUMAN Coactosin-like protein• ELOB_HUMAN Transcription elongation factor B polypeptide 2• ALDOA_HUMAN Fructose-bisphosphate aldolase A


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