2015 sf exploratorium lecture: "corn: diversity and origins"

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Corn: Diversity and Origins Jeffrey Ross-Ibarra @jrossibarra • www.rilab.org University of California, Davis Photo: Jason Wallace

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Page 1: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Corn: Diversity and Origins

Jeffrey Ross-Ibarra @jrossibarra • www.rilab.org University of California, Davis

Photo: Jason Wallace

Page 2: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

tassel (male)

ear (female)

Photo: U. Nebraska-Lincoln

corn (maize)

Page 3: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

tassel (male)

ear (female)Photo: OllieMartin

Photo: U. Nebraska-Lincoln

corn (maize)

Page 4: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

tassel (male)

ear (female)Photo: OllieMartin

Photo: U. Nebraska-Lincoln

Photo: © HD WIlson

corn (maize)

Page 5: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Photo: Rosana Prada

Page 6: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Photo: https://www.flickr.com/photos/croptrust/

Page 7: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Photo: https://www.flickr.com/photos/dandelion-and-burdock/

Page 8: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"
Page 9: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"
Page 10: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

ACTG

Page 11: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Photo: Michael Neugebauer

1.2% DNA difference

Photo: USDA

Page 12: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Photo: Michael Neugebauer

1.2% DNA difference1.6% DNA difference

Photo: USDA

Page 13: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Original DNA

Page 14: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Mutation

Original DNA

Page 15: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Original DNA Transposon

Barbara McClintock 1902-1992

Page 16: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Original DNA Transposon

Barbara McClintock 1902-1992

Page 17: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Original DNA Transposon

Page 18: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Photo: Damon Lisch

Page 19: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

purple:no transposon

Photo: Damon Lisch

Page 20: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

purple:no transposon

yellow:transposon

inserted

Photo: Damon Lisch

Page 21: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

purple:no transposon

yellow:transposon

inserted

spots:transposon jumps

Photo: Damon Lisch

Page 22: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

purple:no transposon

yellow:transposon

inserted

spots:transposon jumps

Photo: Damon Lisch

Page 23: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

no transposon

Photos: Cold Spring Harbor Laboratory Press

transposon

Page 24: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

A TG AC T

A TG GC T

A CG GC T

A TG GC T

Page 25: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

A TG AC T

A TG GC T

A CG GC T

A TG GC T

Page 26: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

A TG AC T

A TG GC T

A CG GC T

A TG GC T

Page 27: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

A TG AC T

A TG GC T

A CG GC T

A TG GC T

A TG AC T

A CG GC T

Page 28: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

A TG AC T

A TG GC T

A CG AC T

A TG AC T

A CG AC T

A CG GC T

A CG GC T

A TG GC T

traditional (landrace)

Page 29: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

A CG GC T

A CG GC T

modern industrial corn

Page 30: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

A CG GC T

A CG GC T

A CG GC T

A CG GC T

modern industrial corn

Page 31: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

A CG GC T

A CG GC T

A TG AC T

A TG AC T

Modern Industrial Corn

Page 32: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

A CG GC T

A CG GC T

A TG AC T

A TG AC T

A CG GC T

A TG AC T

Modern Industrial Corn

Page 33: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

A CG GC T

A CG GC T

A TG AC T

A TG AC T

A CG GC T

A TG AC T

A CG GC T

A TG AC T

Modern Industrial Corn

Page 34: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

A CG GC T

A CG GC T

A TG AC T

A TG AC T

A CG GC T

A TG AC T

Modern Industrial Corn

Page 35: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Beadle 1979 Field Museum of Natural History Bulletin Meyerowitz 1994 Current Biology

Duvick et al. 1999 US 6639132 B1

maize origins

Tripsacum extinct maizeF1F1

teosinte Zea mays ssp. parviglumis

maize Zea mays ssp. mays

George Beadle

Page 36: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Meyerowitz 1994 Current Biology Duvick et al. 1999 US 6639132 B1

maize origins

Tripsacum extinct maizeF1F1

teosinte Zea mays ssp. parviglumis

maize Zea mays ssp. mays

teosinte parviglumis

teosinte mexicana

modern corn

Matsuoka 2002 PNAS

Page 37: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

teosinte parviglumis

teosinte mexicana

modern corn

Matsuoka 2002 PNAS

Page 38: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"
Page 39: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"
Page 40: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"
Page 41: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"
Page 42: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Photos: Matt Hufford, Brandon Gaut, John Doebley

Page 43: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"
Page 44: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

teosinte teosinte

modern corn

Page 45: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

modern corn

teosinte

Page 46: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

modern corn

teosinte

Page 47: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

modern corn

reconstructed ancestral corn

01010

0010 01011 01111

10

Page 48: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

modern corn

reconstructed ancestral corn

01010

0010 01011 01111

10

Page 49: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"
Page 50: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"
Page 51: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Highland Route

Page 52: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Highland Route

Pacific Route

Page 53: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Photo: Moenkopi Legacy Inn & Suites

Page 54: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Highland Route

Pacific Route

Page 55: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Highland Route

Pacific Route

modern Chapalote

modern Palomero

Page 56: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Highland Route

Pacific Route

modern Chapalote

modern Palomero

Tularosa Cave

Page 57: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Highland Route

Pacific Route

3,000 yrs

modern Chapalote

modern Palomero

Page 58: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Highland Route

Pacific Route

3,000 yrs

modern Chapalote

modern Palomero

2,000 yrs 1,000 yrs

Page 59: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

Highland Route

Pacific Route

3,000 yrs

modern Chapalote

modern Palomero

700 yrs2,000 yrs 1,000 yrs

Page 60: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"

01010

0010 01011 01111

10

Page 61: 2015 SF Exploratorium Lecture: "Corn: Diversity and Origins"